RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 Q8NBF4 154 aa10.44□□□□□ -0.74
CCDC50-201ENST00000392455 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
CCDC50-201ENST00000392455 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
CCDC50-201ENST00000392455 CD164Q04900 197 aa10.43□□□□□ -0.74
CCDC50-201ENST00000392455 IGLV4-60A0A075B6I1 120 aa10.43□□□□□ -0.74
CCDC50-201ENST00000392455 NCOR2Q9Y618 2525 aa10.42□□□□□ -0.74
CCDC50-201ENST00000392455 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
CCDC50-201ENST00000392455 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
CCDC50-201ENST00000392455 CRIP2P52943 208 aaPredicted RBP10.41□□□□□ -0.74
CCDC50-201ENST00000392455 SMCR5Q8TEV8 140 aa10.41□□□□□ -0.74
CCDC50-201ENST00000392455 FHL2Q14192 279 aa10.41□□□□□ -0.74
CCDC50-201ENST00000392455 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
CCDC50-201ENST00000392455 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
CCDC50-201ENST00000392455 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
CCDC50-201ENST00000392455 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
CCDC50-201ENST00000392455 KIAA0087Q14695 138 aa10.4□□□□□ -0.75
CCDC50-201ENST00000392455 CDSNQ15517 529 aa10.39□□□□□ -0.75
CCDC50-201ENST00000392455 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
CCDC50-201ENST00000392455 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
CCDC50-201ENST00000392455 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CCDC50-201ENST00000392455 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
CCDC50-201ENST00000392455 DEFB116Q30KQ4 102 aa10.38□□□□□ -0.75
CCDC50-201ENST00000392455 C22orf24Q9Y442 160 aa10.37□□□□□ -0.75
CCDC50-201ENST00000392455 AVPP01185 164 aa10.36□□□□□ -0.75
CCDC50-201ENST00000392455 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
CCDC50-201ENST00000392455 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
CCDC50-201ENST00000392455 CHD8Q9HCK8 2581 aa10.35□□□□□ -0.75
CCDC50-201ENST00000392455 H3BNG1 76 aa10.35□□□□□ -0.75
CCDC50-201ENST00000392455 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
CCDC50-201ENST00000392455 Q6ZRP5 223 aa10.34□□□□□ -0.75
CCDC50-201ENST00000392455 IGF2RP11717 2491 aa10.34□□□□□ -0.75
CCDC50-201ENST00000392455 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
CCDC50-201ENST00000392455 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
CCDC50-201ENST00000392455 CR1P17927 2039 aa10.33□□□□□ -0.76
CCDC50-201ENST00000392455 ODF3L2Q3SX64 289 aa10.33□□□□□ -0.76
CCDC50-201ENST00000392455 C4orf26Q17RF5 130 aa10.32□□□□□ -0.76
CCDC50-201ENST00000392455 Q9UF83 564 aa10.31□□□□□ -0.76
CCDC50-201ENST00000392455 A8MWP4 228 aa10.31□□□□□ -0.76
CCDC50-201ENST00000392455 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
CCDC50-201ENST00000392455 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
CCDC50-201ENST00000392455 USP24Q9UPU5 2620 aa10.3□□□□□ -0.76
CCDC50-201ENST00000392455 KRTAP10-9P60411 292 aa10.3□□□□□ -0.76
CCDC50-201ENST00000392455 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
CCDC50-201ENST00000392455 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
CCDC50-201ENST00000392455 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
CCDC50-201ENST00000392455 Q6ZRX8 168 aa10.29□□□□□ -0.76
CCDC50-201ENST00000392455 USP9YO00507 2555 aaPredicted RBP10.29□□□□□ -0.76
CCDC50-201ENST00000392455 Q6ZRU5 148 aa10.29□□□□□ -0.76
CCDC50-201ENST00000392455 Q6ZQT0 140 aa10.28□□□□□ -0.76
CCDC50-201ENST00000392455 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
CCDC50-201ENST00000392455 LCA10Q71F78 164 aa10.28□□□□□ -0.76
CCDC50-201ENST00000392455 IGLV8-61A0A075B6I0 122 aa10.28□□□□□ -0.76
CCDC50-201ENST00000392455 ANKRD11Q6UB99 2663 aaPredicted RBP10.27□□□□□ -0.77
CCDC50-201ENST00000392455 LINC00483Q53H64 154 aa10.27□□□□□ -0.77
CCDC50-201ENST00000392455 COA5Q86WW8 74 aa10.26□□□□□ -0.77
CCDC50-201ENST00000392455 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
CCDC50-201ENST00000392455 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
CCDC50-201ENST00000392455 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
CCDC50-201ENST00000392455 SRCAPQ6ZRS2 3230 aa10.24□□□□□ -0.77
CCDC50-201ENST00000392455 Q96NJ1 140 aa10.23□□□□□ -0.77
CCDC50-201ENST00000392455 MDFIQ99750 246 aa10.23□□□□□ -0.77
CCDC50-201ENST00000392455 COX6B2Q6YFQ2 88 aa10.22□□□□□ -0.77
CCDC50-201ENST00000392455 Q6ZSN1 163 aa10.22□□□□□ -0.77
CCDC50-201ENST00000392455 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
CCDC50-201ENST00000392455 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
CCDC50-201ENST00000392455 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.77
CCDC50-201ENST00000392455 PRR15Q8IV56 129 aa10.21□□□□□ -0.78
CCDC50-201ENST00000392455 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.78
CCDC50-201ENST00000392455 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
CCDC50-201ENST00000392455 FHL3Q13643 280 aa10.2□□□□□ -0.78
CCDC50-201ENST00000392455 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
CCDC50-201ENST00000392455 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
CCDC50-201ENST00000392455 A8MTW9 85 aa10.19□□□□□ -0.78
CCDC50-201ENST00000392455 CSNK1G2-AS1Q8NCQ2 148 aa10.19□□□□□ -0.78
CCDC50-201ENST00000392455 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
CCDC50-201ENST00000392455 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
CCDC50-201ENST00000392455 TM2D3Q9BRN9 247 aa10.15□□□□□ -0.78
CCDC50-201ENST00000392455 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.79
CCDC50-201ENST00000392455 KLKP1Q107X0 134 aa10.14□□□□□ -0.79
CCDC50-201ENST00000392455 SPANXA2-OT1Q8N9U9 137 aa10.13□□□□□ -0.79
CCDC50-201ENST00000392455 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
CCDC50-201ENST00000392455 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
CCDC50-201ENST00000392455 LINC00310P59036 64 aa10.13□□□□□ -0.79
CCDC50-201ENST00000392455 A0A0A0MQY5 61 aa10.12□□□□□ -0.79
CCDC50-201ENST00000392455 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
CCDC50-201ENST00000392455 J3QL48 77 aa10.11□□□□□ -0.79
CCDC50-201ENST00000392455 A0A1W2PPR1 153 aa10.1□□□□□ -0.79
CCDC50-201ENST00000392455 RTL8CO15255 209 aa10.08□□□□□ -0.8
CCDC50-201ENST00000392455 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
CCDC50-201ENST00000392455 Q1T7F1 81 aa10.06□□□□□ -0.8
CCDC50-201ENST00000392455 A8MUN3 132 aa10.05□□□□□ -0.8
CCDC50-201ENST00000392455 A0A096LNJ9 63 aa10.05□□□□□ -0.8
CCDC50-201ENST00000392455 C8orf17Q9NRJ1 99 aa10.05□□□□□ -0.8
CCDC50-201ENST00000392455 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
CCDC50-201ENST00000392455 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
CCDC50-201ENST00000392455 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
CCDC50-201ENST00000392455 K7EQZ3 153 aa9.99□□□□□ -0.81
CCDC50-201ENST00000392455 DNAH10OSP0CZ25 163 aa9.99□□□□□ -0.81
CCDC50-201ENST00000392455 PRO0461Q9UI25 63 aa9.98□□□□□ -0.81
CCDC50-201ENST00000392455 BPTFQ12830 3046 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms