RNA–Protein interactions for RNA: ENST00000390536.2

TRAJ1-201, Transcript of T cell receptor alpha joining 1 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRAJ1, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ1-201ENST00000390536 GNGT1P63211 74 aa-1.86□□□□□ -2.71
TRAJ1-201ENST00000390536 MORN2Q502X0 79 aa-1.86□□□□□ -2.71
TRAJ1-201ENST00000390536 GINS2Q9Y248 185 aa-1.86□□□□□ -2.71
TRAJ1-201ENST00000390536 KIF20BQ96Q89 1820 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 MBD5Q9P267 1494 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 FAM223BA6NKX1 122 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 SCGB1A1P11684 91 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 PRLHP81277 87 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 ARHGEF5Q12774 1597 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 Q56UQ5 140 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 NUP188Q5SRE5 1749 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 EDC4Q6P2E9 1401 aaKnown RBP-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 COPS9Q8WXC6 57 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 ARL11Q969Q4 196 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 PDCD10Q9BUL8 212 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 KIAA1551Q9HCM1 1747 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 LINC00846Q9NV44 126 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 UBE2D4Q9Y2X8 147 aa-1.87□□□□□ -2.71
TRAJ1-201ENST00000390536 A0A0G2JND7 137 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 NDUFA3O95167 84 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 MT1EP04732 61 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 ARMS2P0C7Q2 107 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 SMCO1Q147U7 214 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 CLPSL2Q6UWE3 100 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 PPP3R2Q96LZ3 170 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 SPANXDQ9BXN6 97 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 MANBALQ9NQG1 85 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 GSKIPQ9P0R6 139 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 ADGRL2O95490 1459 aa-1.88□□□□□ -2.71
TRAJ1-201ENST00000390536 H3BQF6 201 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 SMR3BP02814 79 aaPredicted RBP-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 TSPAN19P0C672 248 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 DEFB107AQ8IZN7 70 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 PP6455Q8WZ26 134 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 DPH3Q96FX2 82 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 SPANXA1Q9NS26 97 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 LINC00474Q9P2X8 69 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 UBR3Q6ZT12 1888 aa-1.89□□□□□ -2.71
TRAJ1-201ENST00000390536 SCN7AQ01118 1682 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 C4AP0C0L4 1744 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 C4BP0C0L5 1744 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 MT1GP13640 62 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 COPZ1P61923 177 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 MT1LQ93083 61 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 LSM10Q969L4 123 aaKnown RBP-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 TCEAL4Q96EI5 215 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 C12orf57Q99622 126 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 VAMP8Q9BV40 100 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 CENPHQ9H3R5 247 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 SMPXQ9UHP9 88 aa-1.9□□□□□ -2.71
TRAJ1-201ENST00000390536 CPSF1Q10570 1443 aaKnown RBP-1.91□□□□□ -2.71
TRAJ1-201ENST00000390536 EHBP1L1Q8N3D4 1523 aa-1.91□□□□□ -2.71
TRAJ1-201ENST00000390536 H0Y9P7 68 aa-1.91□□□□□ -2.72
TRAJ1-201ENST00000390536 TSTD1Q8NFU3 115 aa-1.91□□□□□ -2.72
TRAJ1-201ENST00000390536 CCDC167Q9P0B6 97 aa-1.91□□□□□ -2.72
TRAJ1-201ENST00000390536 SERP1Q9Y6X1 66 aa-1.91□□□□□ -2.72
TRAJ1-201ENST00000390536 SMG6Q86US8 1419 aaKnown RBP-1.91□□□□□ -2.72
TRAJ1-201ENST00000390536 COX6CP09669 75 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 GNG11P61952 73 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 COMMD6Q7Z4G1 85 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 DDA1Q9BW61 102 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 RERGLQ9H628 205 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 DNAH10Q8IVF4 4471 aa-1.92□□□□□ -2.72
TRAJ1-201ENST00000390536 PBRM1Q86U86 1689 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 C7orf77A4D0Y5 90 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 FABP1P07148 127 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 HSD52Q0P140 79 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 SMIM21Q3B7S5 101 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 COX6B2Q6YFQ2 88 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 CDC26Q8NHZ8 85 aa-1.93□□□□□ -2.72
TRAJ1-201ENST00000390536 SCN11AQ9UI33 1791 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 MIF4GDA9UHW6 222 aaKnown RBP-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 F6UZH7 168 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 CKS1BP61024 79 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 Q0VG73 95 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 SMIM15Q7Z3B0 74 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 C8orf59Q8N0T1 100 aaPredicted RBP-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 MT1MQ8N339 61 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 AP4S1Q9Y587 144 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 BOD1L1Q8NFC6 3051 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 CFTRP13569 1480 aa-1.94□□□□□ -2.72
TRAJ1-201ENST00000390536 MAPKBP1O60336 1514 aa-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 RPS25P62851 125 aaKnown RBP-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 UBE2L3P68036 154 aaKnown RBP-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 PRO1854Q9UHT4 67 aa-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 ABCC5O15440 1437 aa-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 MGAQ8IWI9 3026 aa-1.95□□□□□ -2.72
TRAJ1-201ENST00000390536 FHAD1B1AJZ9 1412 aa-1.96□□□□□ -2.72
TRAJ1-201ENST00000390536 MT2AP02795 61 aa-1.96□□□□□ -2.72
TRAJ1-201ENST00000390536 CATR1Q13166 79 aa-1.96□□□□□ -2.72
TRAJ1-201ENST00000390536 CEP152O94986 1710 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 UBE2L5PA0A1B0GUS4 154 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 MT1BP07438 61 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 C3orf79P0CE67 100 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 PSMG4Q5JS54 123 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 PFDN5Q99471 154 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 PRO3102Q9H379 93 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 A2ML1A8K2U0 1454 aa-1.97□□□□□ -2.72
TRAJ1-201ENST00000390536 CUX1P39880 1505 aa-1.97□□□□□ -2.73
TRAJ1-201ENST00000390536 APOC2P02655 101 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms