RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 CHKB-CPT1BH3BT56 60 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 NDUFA4O00483 81 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 PSPHP1O15172 72 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 NDUFB1O75438 58 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 GAS8-AS1O95177 125 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 IGKV1-17P01599 117 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 CTSGP08311 255 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 SYCNQ0VAF6 134 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 KLK9Q2XQG4 91 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 FAM229BQ4G0N7 80 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 Q6ZSV7 163 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 Q8TAT8 98 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 LITAFQ99732 161 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 SMR3AQ99954 134 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 Q9HAA7 133 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 KLK9Q9UKQ9 250 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 UNC79Q9P2D8 2635 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 HECTD1Q9ULT8 2610 aa1.86□□□□□ -2.11
TRAV41-201ENST00000390468 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
TRAV41-201ENST00000390468 FN1P02751 2386 aaKnown RBP1.85□□□□□ -2.11
TRAV41-201ENST00000390468 ASH1LQ9NR48 2969 aaKnown RBP1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV4OR15-8A0A075B7B6 117 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV3OR16-13A0A075B7E8 117 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 A0A087WW49 117 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV3-74A0A0B4J1X5 117 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV3-66A0A0C4DH42 116 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 A6NED7 52 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 HCG22E2RYF7 251 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 BPY2O14599 106 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 LINC01547P58512 204 aaPredicted RBP1.85□□□□□ -2.11
TRAV41-201ENST00000390468 HAMPP81172 84 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 LINC01554Q52M75 96 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 C10orf99Q6UWK7 81 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 CASC2Q6XLA1 102 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 WFDC9Q8NEX5 89 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 SPATA3Q8NHX4 192 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 C4orf3Q8WVX3 66 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 RPL39LQ96EH5 51 aaKnown RBP1.85□□□□□ -2.11
TRAV41-201ENST00000390468 C2CD3Q4AC94 2353 aa1.85□□□□□ -2.11
TRAV41-201ENST00000390468 IGKV2D-30A0A075B6S6 120 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 IGHV3-49A0A0A0MS15 119 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 TRBV6-8A0A0A6YYG3 113 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 IGKV3D-20A0A0C4DH25 116 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 A0A0J9YXV3 536 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 CLPSL1A2RUU4 121 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 A6NN06 94 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 NCR3O14931 201 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 LECT2O14960 151 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 TSHBP01222 138 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 PRM2P04554 102 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 RPL39P62891 51 aaKnown RBP1.84□□□□□ -2.11
TRAV41-201ENST00000390468 DEFB136Q30KP8 78 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 ASB16-AS1Q495Z4 193 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 FAM74A4Q5TZK3 123 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 Q6ZRP5 223 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 GPHB5Q86YW7 130 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 MIR7-3HGQ8N6C7 128 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 LINC01006Q8NI28 216 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 ZNF625Q96I27 306 aaPredicted RBP1.84□□□□□ -2.11
TRAV41-201ENST00000390468 RHPN1-AS1Q9BWJ2 59 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 Q9H8V8 135 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 MAP6D1Q9H9H5 199 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 SMAD5-AS1Q9Y6J3 95 aa1.84□□□□□ -2.11
TRAV41-201ENST00000390468 NOTCH2Q04721 2471 aa1.84□□□□□ -2.12
TRAV41-201ENST00000390468 NOTCH3Q9UM47 2321 aa1.84□□□□□ -2.12
TRAV41-201ENST00000390468 SETXQ7Z333 2677 aaKnown RBP1.84□□□□□ -2.12
TRAV41-201ENST00000390468 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.12
TRAV41-201ENST00000390468 IGKV3-7A0A075B6H7 116 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 IGLV4-3A0A075B6K6 122 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 A0A087WYN8 130 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 H0Y9J4 135 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 CCL24O00175 119 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 POLR2KP53803 58 aaKnown RBP1.83□□□□□ -2.12
TRAV41-201ENST00000390468 ELOF1P60002 83 aaKnown RBP1.83□□□□□ -2.12
TRAV41-201ENST00000390468 KIAA0087Q14695 138 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 C9orf47Q6ZRZ4 202 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 Q6ZTC4 211 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 C18orf65Q6ZTR6 163 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 Q75L30 129 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 C20orf203Q8NBC4 194 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 FAM218AQ96MZ4 157 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 SND1-IT1Q9HBX3 110 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 KIF25-AS1Q9Y6Z4 181 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 DNAH3Q8TD57 4116 aa1.83□□□□□ -2.12
TRAV41-201ENST00000390468 MXRA5Q9NR99 2828 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 TRAV10A0A0B4J240 114 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 TRBV10-1A0A0K0K1A3 114 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 C16orf90A8MZG2 172 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 PSCAO43653 123 aa1.82□□□□□ -2.12
TRAV41-201ENST00000390468 PRB4P10163 310 aaPredicted RBP1.82□□□□□ -2.12
TRAV41-201ENST00000390468 LINC00313P59037 77 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms