RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
TRAV12-3-201ENST00000390442 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
TRAV12-3-201ENST00000390442 C2orf88Q9BSF0 95 aa4.35□□□□□ -1.71
TRAV12-3-201ENST00000390442 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 HBDP02042 147 aa4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 IGLC3P0DOY3 106 aa4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 C9orf116Q5BN46 136 aaPredicted RBP4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 Q8IZM0 81 aa4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
TRAV12-3-201ENST00000390442 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 FAM168BA1KXE4 195 aa4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 NDUFA1O15239 70 aa4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 CHCHD1Q96BP2 118 aaKnown RBP4.33□□□□□ -1.72
TRAV12-3-201ENST00000390442 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 SEC11AP67812 179 aa4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 CTAG1AP78358 180 aa4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 FAM19A2Q8N3H0 131 aa4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
TRAV12-3-201ENST00000390442 NDUFC2-KCTD14E9PQ53 114 aa4.31□□□□□ -1.72
TRAV12-3-201ENST00000390442 SPINK8P0C7L1 97 aa4.31□□□□□ -1.72
TRAV12-3-201ENST00000390442 RAB5BP61020 215 aa4.31□□□□□ -1.72
TRAV12-3-201ENST00000390442 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
TRAV12-3-201ENST00000390442 TRAV12-1A0A0B4J245 112 aa4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 SERF1AO75920 110 aa4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 TOMM7Q9P0U1 55 aa4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
TRAV12-3-201ENST00000390442 F8VRH5 84 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 BAGE3Q86Y29 109 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 COX7B2Q8TF08 81 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 DPH3Q96FX2 82 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 V9GYY9 64 aa4.29□□□□□ -1.72
TRAV12-3-201ENST00000390442 TMEM223A0PJW6 202 aa4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 S100A1P23297 94 aa4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 CXCL5P42830 114 aa4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 PACRGQ96M98 296 aaPredicted RBP4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 PSORS1C2Q9UIG4 136 aa4.28□□□□□ -1.72
TRAV12-3-201ENST00000390442 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 NDUFA6P56556 154 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 CKS1BP61024 79 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 Q8NDZ9 215 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
TRAV12-3-201ENST00000390442 A0A087X002 238 aa4.26□□□□□ -1.73
TRAV12-3-201ENST00000390442 H3BRM9 83 aa4.26□□□□□ -1.73
TRAV12-3-201ENST00000390442 LEPROTL1O95214 131 aa4.26□□□□□ -1.73
TRAV12-3-201ENST00000390442 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
TRAV12-3-201ENST00000390442 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
TRAV12-3-201ENST00000390442 A6NDN8 102 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 C5orf47Q569G3 176 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 Q8NBF4 154 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 CBY1Q9Y3M2 126 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 C22orf24Q9Y442 160 aa4.25□□□□□ -1.73
TRAV12-3-201ENST00000390442 IGLV7-46A0A075B6I9 117 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 M0QXV9 152 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 IGLV7-43P04211 117 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 TMEM170BQ5T4T1 132 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 LINC01600Q96MT4 127 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 TP73-AS1Q9UF72 201 aa4.24□□□□□ -1.73
TRAV12-3-201ENST00000390442 KRTAP1-4P0C5Y4 121 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 COX17Q14061 63 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 SND1-IT1Q9HBX3 110 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
TRAV12-3-201ENST00000390442 FABP4P15090 132 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 C1orf137Q5JT78 98 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 HSPB8Q9UJY1 196 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 LPAP08519 4548 aa4.22□□□□□ -1.73
TRAV12-3-201ENST00000390442 SYS1-DBNDD2H3BUS1 97 aa4.21□□□□□ -1.74
TRAV12-3-201ENST00000390442 PFN2P35080 140 aa4.21□□□□□ -1.74
TRAV12-3-201ENST00000390442 PRR4Q16378 134 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms