RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 DEFB135Q30KP9 77 aa5.22□□□□□ -1.57
TRBV28-201ENST00000390400 ZNF625Q96I27 306 aaPredicted RBP5.22□□□□□ -1.57
TRBV28-201ENST00000390400 LINC00167Q96N53 147 aa5.22□□□□□ -1.57
TRBV28-201ENST00000390400 MEGF8Q7Z7M0 2845 aa5.22□□□□□ -1.57
TRBV28-201ENST00000390400 TRAV7A0A075B6U4 112 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 IGHV3OR16-12A0A075B7B8 117 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 CCKP06307 115 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 RBMY1A1P0DJD3 496 aaKnown RBP5.21□□□□□ -1.58
TRBV28-201ENST00000390400 RBMY1CP0DJD4 496 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 RBMY1FQ15415 496 aaKnown RBP5.21□□□□□ -1.58
TRBV28-201ENST00000390400 CSNK1G2-AS1Q8NCQ2 148 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 MUC7Q8TAX7 377 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 B9D2Q9BPU9 175 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
TRBV28-201ENST00000390400 TENM3Q9P273 2699 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 FBN3Q75N90 2809 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 TRBV10-1A0A0K0K1A3 114 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 C1orf158Q8N1D5 194 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 FAM104AQ969W3 186 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 RETNQ9HD89 108 aa5.2□□□□□ -1.58
TRBV28-201ENST00000390400 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 HTN1P15515 57 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 PFN2P35080 140 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 LINC01561Q8N1V8 128 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 TM2D3Q9BRN9 247 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 UBL5Q9BZL1 73 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 ORMDL1Q9P0S3 153 aa5.19□□□□□ -1.58
TRBV28-201ENST00000390400 IBA57-AS1B1ANH7 110 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 SMIM1B2RUZ4 78 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 TMEM256-PLSCR3K7ERE1 68 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 MIFP14174 115 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 FAM74A4Q5TZK3 123 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 TMEM243Q9BU79 118 aa5.18□□□□□ -1.58
TRBV28-201ENST00000390400 IGHV3-64A0A075B6Q5 118 aa5.17□□□□□ -1.58
TRBV28-201ENST00000390400 PRM2P04554 102 aa5.17□□□□□ -1.58
TRBV28-201ENST00000390400 C16orf74Q96GX8 76 aa5.17□□□□□ -1.58
TRBV28-201ENST00000390400 LINC00846Q9NV44 126 aa5.17□□□□□ -1.58
TRBV28-201ENST00000390400 CDKN2A-AS1Q9UH64 79 aa5.17□□□□□ -1.58
TRBV28-201ENST00000390400 PRKDCP78527 4128 aaKnown RBP5.17□□□□□ -1.58
TRBV28-201ENST00000390400 CXCL6P80162 114 aa5.16□□□□□ -1.58
TRBV28-201ENST00000390400 Q8NAQ8 132 aa5.16□□□□□ -1.58
TRBV28-201ENST00000390400 OPRPNQ99935 248 aaPredicted RBP5.16□□□□□ -1.58
TRBV28-201ENST00000390400 MUC4Q99102 2169 aa5.15□□□□□ -1.58
TRBV28-201ENST00000390400 LOC110117498A0A087WWA1 95 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 H7BZZ5 65 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 DEFB4AO15263 64 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 XCL1P47992 114 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 LINC00242Q5T6M2 205 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 HRCT1Q6UXD1 115 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 C11orf72Q8NBR9 251 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 DSCR8Q96T75 97 aa5.15□□□□□ -1.59
TRBV28-201ENST00000390400 C11orf68Q9H3H3 251 aaKnown RBP5.15□□□□□ -1.59
TRBV28-201ENST00000390400 PLAC8L1A1L4L8 177 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 RS1O15537 224 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 FAM218AQ96MZ4 157 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 SND1-IT1Q9HBX3 110 aa5.14□□□□□ -1.59
TRBV28-201ENST00000390400 NOP10Q9NPE3 64 aaKnown RBP5.14□□□□□ -1.59
TRBV28-201ENST00000390400 TGP01266 2768 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 TRGV1A0A0A0MS02 117 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 A0A0J9YWU9 116 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 LYRM9A8MSI8 78 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 OXTP01178 125 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 COL7A1Q02388 2944 aa5.13□□□□□ -1.59
TRBV28-201ENST00000390400 TRBV6-4A0A1B0GX49 114 aa5.12□□□□□ -1.59
TRBV28-201ENST00000390400 K7EQD1 137 aa5.12□□□□□ -1.59
TRBV28-201ENST00000390400 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
TRBV28-201ENST00000390400 RPL36AP83881 106 aaKnown RBP5.12□□□□□ -1.59
TRBV28-201ENST00000390400 SMIM11BQ8TCY0 68 aa5.12□□□□□ -1.59
TRBV28-201ENST00000390400 C14orf132Q9NPU4 83 aa5.12□□□□□ -1.59
TRBV28-201ENST00000390400 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 IGKV3D-7A0A0C4DH55 119 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 DEFB130BP0DP73 79 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 DEFB130AP0DP74 79 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 DAD1P61803 113 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 COX17Q14061 63 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 Q6ZTI0 123 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 CELA1Q9UNI1 258 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 V9GYY9 64 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 NACAE9PAV3 2078 aa5.11□□□□□ -1.59
TRBV28-201ENST00000390400 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 A0A1B0GW54 56 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 C20orf197Q8N268 126 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 LINC00337Q8N6G1 96 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 LINC00612Q8N6U2 182 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 C11orf45Q8TAV5 145 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 CYSTM1Q9H1C7 97 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 CDC42SE2Q9NRR3 84 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 DNAH9Q9NYC9 4486 aa5.1□□□□□ -1.59
TRBV28-201ENST00000390400 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
TRBV28-201ENST00000390400 NANOS2P60321 138 aaKnown RBP5.09□□□□□ -1.59
TRBV28-201ENST00000390400 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
TRBV28-201ENST00000390400 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
TRBV28-201ENST00000390400 A0A087WYN8 130 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms