RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
TRAPPC9-201ENST00000389328 HECTD1Q9ULT8 2610 aa9.11□□□□□ -0.95
TRAPPC9-201ENST00000389328 KPRPQ5T749 579 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-201ENST00000389328 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
TRAPPC9-201ENST00000389328 ATRQ13535 2644 aa9.1□□□□□ -0.95
TRAPPC9-201ENST00000389328 C10orf25Q5T742 122 aa9.09□□□□□ -0.95
TRAPPC9-201ENST00000389328 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
TRAPPC9-201ENST00000389328 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
TRAPPC9-201ENST00000389328 TRBV7-6A0A0J9YX20 115 aa9.08□□□□□ -0.96
TRAPPC9-201ENST00000389328 H0Y9J4 135 aa9.08□□□□□ -0.96
TRAPPC9-201ENST00000389328 PRYO14603 147 aa9.07□□□□□ -0.96
TRAPPC9-201ENST00000389328 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
TRAPPC9-201ENST00000389328 DMXL2Q8TDJ6 3036 aa9.07□□□□□ -0.96
TRAPPC9-201ENST00000389328 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
TRAPPC9-201ENST00000389328 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 Q6ZQT0 140 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 V9GYY9 64 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 EGFEM1PQ0D2K5 195 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
TRAPPC9-201ENST00000389328 NDUFB1O75438 58 aa9.05□□□□□ -0.96
TRAPPC9-201ENST00000389328 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
TRAPPC9-201ENST00000389328 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-201ENST00000389328 CXCL6P80162 114 aa9.05□□□□□ -0.96
TRAPPC9-201ENST00000389328 MAST4O15021 2626 aa9.04□□□□□ -0.96
TRAPPC9-201ENST00000389328 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
TRAPPC9-201ENST00000389328 UBE2AP49459 152 aa9.04□□□□□ -0.96
TRAPPC9-201ENST00000389328 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 SMR3AQ99954 134 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 DHRS4-AS1Q9P1J3 65 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 INAFM1C9JVW0 142 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 TM2D3Q9BRN9 247 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
TRAPPC9-201ENST00000389328 LINC01600Q96MT4 127 aa9.02□□□□□ -0.97
TRAPPC9-201ENST00000389328 WDFY3Q8IZQ1 3526 aa9.02□□□□□ -0.97
TRAPPC9-201ENST00000389328 Q6ZRU5 148 aa9.01□□□□□ -0.97
TRAPPC9-201ENST00000389328 LRBAP50851 2863 aa9.01□□□□□ -0.97
TRAPPC9-201ENST00000389328 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
TRAPPC9-201ENST00000389328 PRO0628Q9UI54 55 aa9.01□□□□□ -0.97
TRAPPC9-201ENST00000389328 ATMQ13315 3056 aa9□□□□□ -0.97
TRAPPC9-201ENST00000389328 PSPHP1O15172 72 aa8.99□□□□□ -0.97
TRAPPC9-201ENST00000389328 RETNQ9HD89 108 aa8.99□□□□□ -0.97
TRAPPC9-201ENST00000389328 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
TRAPPC9-201ENST00000389328 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
TRAPPC9-201ENST00000389328 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
TRAPPC9-201ENST00000389328 LY6G6DO95868 133 aa8.98□□□□□ -0.97
TRAPPC9-201ENST00000389328 LYPD5Q6UWN5 251 aa8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 CHD6Q8TD26 2715 aa8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 LOC110117498A0A087WWA1 95 aa8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 LINC00208Q96KT6 92 aa8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 ESRGQ1W209 222 aa8.97□□□□□ -0.97
TRAPPC9-201ENST00000389328 Q6ZTC4 211 aa8.96□□□□□ -0.97
TRAPPC9-201ENST00000389328 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.98
TRAPPC9-201ENST00000389328 X6R8D5 127 aa8.95□□□□□ -0.98
TRAPPC9-201ENST00000389328 FLNAP21333 2647 aaKnown RBP8.95□□□□□ -0.98
TRAPPC9-201ENST00000389328 BCE1O60756 84 aa8.95□□□□□ -0.98
TRAPPC9-201ENST00000389328 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
TRAPPC9-201ENST00000389328 KIAA0087Q14695 138 aa8.95□□□□□ -0.98
TRAPPC9-201ENST00000389328 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 GIG44P09565 113 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 C16orf95Q9H693 158 aa8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 FSHBP01225 129 aa8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
TRAPPC9-201ENST00000389328 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
TRAPPC9-201ENST00000389328 ELOF1P60002 83 aaKnown RBP8.92□□□□□ -0.98
TRAPPC9-201ENST00000389328 LINC00474Q9P2X8 69 aa8.92□□□□□ -0.98
TRAPPC9-201ENST00000389328 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
TRAPPC9-201ENST00000389328 A0A087WSZ3 146 aa8.9□□□□□ -0.98
TRAPPC9-201ENST00000389328 A6NED7 52 aa8.9□□□□□ -0.98
TRAPPC9-201ENST00000389328 B9D2Q9BPU9 175 aa8.9□□□□□ -0.98
TRAPPC9-201ENST00000389328 M0R2N4 97 aa8.9□□□□□ -0.99
TRAPPC9-201ENST00000389328 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.99
TRAPPC9-201ENST00000389328 ZZEF1O43149 2961 aa8.9□□□□□ -0.99
TRAPPC9-201ENST00000389328 H7BZZ5 65 aa8.9□□□□□ -0.99
TRAPPC9-201ENST00000389328 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
TRAPPC9-201ENST00000389328 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
TRAPPC9-201ENST00000389328 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
TRAPPC9-201ENST00000389328 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
TRAPPC9-201ENST00000389328 ITPR3Q14573 2671 aa8.87□□□□□ -0.99
TRAPPC9-201ENST00000389328 PMAIP1Q13794 54 aa8.87□□□□□ -0.99
TRAPPC9-201ENST00000389328 MRPL55Q7Z7F7 128 aaKnown RBP8.87□□□□□ -0.99
TRAPPC9-201ENST00000389328 DCHS1Q96JQ0 3298 aa8.87□□□□□ -0.99
TRAPPC9-201ENST00000389328 OBSCN-AS1Q96MR7 158 aa8.86□□□□□ -0.99
TRAPPC9-201ENST00000389328 CFAP46Q8IYW2 2715 aa8.86□□□□□ -0.99
TRAPPC9-201ENST00000389328 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
TRAPPC9-201ENST00000389328 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
TRAPPC9-201ENST00000389328 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
TRAPPC9-201ENST00000389328 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
TRAPPC9-201ENST00000389328 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
TRAPPC9-201ENST00000389328 A0A096LNT2 108 aa8.84□□□□□ -0.99
TRAPPC9-201ENST00000389328 PRLHP81277 87 aa8.83□□□□□ -1
TRAPPC9-201ENST00000389328 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
TRAPPC9-201ENST00000389328 VPREB1P12018 145 aa8.83□□□□□ -1
TRAPPC9-201ENST00000389328 COL12A1Q99715 3063 aa8.83□□□□□ -1
TRAPPC9-201ENST00000389328 CASC2Q6XLA1 102 aa8.82□□□□□ -1
TRAPPC9-201ENST00000389328 C22orf24Q9Y442 160 aa8.82□□□□□ -1
TRAPPC9-201ENST00000389328 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
TRAPPC9-201ENST00000389328 LINC00167Q96N53 147 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms