RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ARMC1Q9NVT9 282 aa-2.44□□□□□ -2.8
RNU6-540P-201ENST00000384622 AKAP12Q02952 1782 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 J3QLW9 94 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 MYL12BO14950 172 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 POLR2DO15514 142 aaKnown RBP-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 HMGN2P05204 90 aaKnown RBP-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 FABP1P07148 127 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 KCNE1P15382 129 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 ATP6V1C1P21283 382 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 HSD11B1P28845 292 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 RANBP1P43487 201 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 SPANXN3Q5MJ09 141 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 ST13P4Q8IZP2 240 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 JAGN1Q8N5M9 183 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 GAFA1Q96PS6 74 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 COPS8Q99627 209 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 COPS4Q9BT78 406 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 MAP1LC3CQ9BXW4 147 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 TMEM133Q9H2Q1 129 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 COPS7AQ9UBW8 275 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 LENEPQ9Y5L5 61 aa-2.45□□□□□ -2.8
RNU6-540P-201ENST00000384622 ABCC9O60706 1549 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 F8VZ95 297 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 PSPHP1O15172 72 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 VPS26AO75436 327 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 DPM2O94777 84 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 SNAP29O95721 258 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 MYL9P24844 172 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 CKS1BP61024 79 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 HBBP68871 147 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 FABP5Q01469 135 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 SAPCD1Q5SSQ6 148 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 CST9Q5W186 159 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 ULK3Q6PHR2 472 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 SMIM7Q9BQ49 75 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 DDA1Q9BW61 102 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 SNHG12Q9BXW3 62 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 COA1Q9GZY4 146 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 STMN4Q9H169 189 aaPredicted RBP-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 ANXA10Q9UJ72 324 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 MROH2BQ7Z745 1585 aa-2.46□□□□□ -2.8
RNU6-540P-201ENST00000384622 CLTCQ00610 1675 aaKnown RBP-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 NAIPQ13075 1403 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 NAP1L6A6NFF2 107 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 E7EQ34 232 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 M0R3G1 203 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 GOSR2O14653 212 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 ATP5HO75947 161 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 ANXA5P08758 320 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 RAB10P61026 200 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 MYL5Q02045 173 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 NKAIN1Q4KMZ8 207 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 PTRHD1Q6GMV3 140 aaKnown RBP-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 SLC35F2Q8IXU6 374 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 SYS1Q8N2H4 156 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 FAM24BQ8N5W8 94 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 OR13C6PQ8NH95 151 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 SLC35B4Q969S0 331 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 SMIM8Q96KF7 97 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 SCLT1Q96NL6 688 aa-2.47□□□□□ -2.8
RNU6-540P-201ENST00000384622 ARHGAP5Q13017 1502 aa-2.47□□□□□ -2.81
RNU6-540P-201ENST00000384622 UGGT2Q9NYU1 1516 aa-2.47□□□□□ -2.81
RNU6-540P-201ENST00000384622 SAMD9Q5K651 1589 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 M0QZK8 103 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 CRCPO75575 148 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 TNFAIP8O95379 198 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 CSTAP01040 98 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 UCHL3P15374 230 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 IFI27P40305 119 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 GUCA1AP43080 201 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 CRIP1P50238 77 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 PCBD1P61457 104 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 S100A7L2Q5SY68 101 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 MPHOSPH6Q99547 160 aaKnown RBP-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 HIST1H2BLQ99880 126 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 PDCD10Q9BUL8 212 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 RPRMQ9NS64 109 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 GSKIPQ9P0R6 139 aa-2.48□□□□□ -2.81
RNU6-540P-201ENST00000384622 KCNE1BA0A087WTH5 132 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 A0A1B0GV72 72 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 LOC285095A0A1B0GVY8 99 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 A0A1B0GW54 56 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 NDUFB3O43676 98 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 IGLC2P0DOY2 106 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 IGLC3P0DOY3 106 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 CD9P21926 228 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 MP68P56378 58 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 CCL20P78556 96 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 LAMTOR4Q0VGL1 99 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 SMCO1Q147U7 214 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 CLLU1OSQ5K130 101 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 CCDC122Q5T0U0 273 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 DPY30Q9C005 99 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 OTORQ9NRC9 128 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 PRO0628Q9UI54 55 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 TPRKBQ9Y3C4 175 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 KCNE3Q9Y6H6 103 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 TTC37Q6PGP7 1564 aa-2.49□□□□□ -2.81
RNU6-540P-201ENST00000384622 TRBV25-1A0A075B6N4 114 aa-2.5□□□□□ -2.81
RNU6-540P-201ENST00000384622 DISC1C4P0D8 188 aa-2.5□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms