RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TLN2Q9Y4G6 2542 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 A0A0G2JMZ2 1700 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 LOC730098B7Z3J9 87 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 LYSTQ99698 3801 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 CSPG4Q6UVK1 2322 aa-0.2□□□□□ -2.44
RNU6-40P-201ENST00000384254 XRN1Q8IZH2 1706 aaKnown RBP-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 PRM1P04553 51 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPRR2EP22531 72 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPRR2BP35325 72 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPRR2AP35326 72 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 KRTAP20-2Q3LI61 65 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 AP4S1Q9Y587 144 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 FAM186AA6NE01 2351 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 ABCC5O15440 1437 aa-0.21□□□□□ -2.44
RNU6-40P-201ENST00000384254 ZFYVE16Q7Z3T8 1539 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 SRCAPQ6ZRS2 3230 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 SPEGQ15772 3267 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 C7orf77A4D0Y5 90 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 CACFD1Q9UGQ2 172 aa-0.22□□□□□ -2.44
RNU6-40P-201ENST00000384254 LRP1BQ9NZR2 4599 aa-0.22□□□□□ -2.45
RNU6-40P-201ENST00000384254 MYO9AB2RTY4 2548 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 ZFHX3Q15911 3703 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 A0A0G2JND7 137 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 PMCHL1Q16048 86 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 NBEAQ8NFP9 2946 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 CSMD1Q96PZ7 3565 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 REV3LO60673 3130 aa-0.23□□□□□ -2.45
RNU6-40P-201ENST00000384254 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.24□□□□□ -2.45
RNU6-40P-201ENST00000384254 A0A087WVE0 104 aa-0.24□□□□□ -2.45
RNU6-40P-201ENST00000384254 H3BQF6 201 aa-0.24□□□□□ -2.45
RNU6-40P-201ENST00000384254 DEFB105AQ8NG35 78 aa-0.24□□□□□ -2.45
RNU6-40P-201ENST00000384254 DNAH7Q8WXX0 4024 aa-0.24□□□□□ -2.45
RNU6-40P-201ENST00000384254 LOC400499M0QZD8 3231 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 CUBNO60494 3623 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 S100A10P60903 97 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 PSMG4Q5JS54 123 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 C14orf144Q96I85 54 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 CCDC141Q6ZP82 1450 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 PLEKHH2Q8IVE3 1493 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 NLRP1Q9C000 1473 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 KIAA0556O60303 1618 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 EYSQ5T1H1 3165 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 ZFHX4Q86UP3 3567 aa-0.25□□□□□ -2.45
RNU6-40P-201ENST00000384254 MYCBP2O75592 4640 aa-0.26□□□□□ -2.45
RNU6-40P-201ENST00000384254 TRAV30A0A087WSZ9 112 aa-0.26□□□□□ -2.45
RNU6-40P-201ENST00000384254 A0A1B0GU69 56 aa-0.26□□□□□ -2.45
RNU6-40P-201ENST00000384254 MKI67P46013 3256 aaKnown RBP-0.26□□□□□ -2.45
RNU6-40P-201ENST00000384254 CFAP47Q6ZTR5 3102 aa-0.26□□□□□ -2.45
RNU6-40P-201ENST00000384254 HSPG2P98160 4391 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 PEG3Q9GZU2 1588 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 CNOT1A5YKK6 2376 aaKnown RBP-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 TRBV25-1A0A075B6N4 114 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 PMCHL2Q9BQD1 86 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 MTORP42345 2549 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 NBPF19A0A087WUL8 3843 aa-0.27□□□□□ -2.45
RNU6-40P-201ENST00000384254 MLH3Q9UHC1 1453 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 CEP290O15078 2479 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 DMXL2Q8TDJ6 3036 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 UQCRHP07919 91 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 FREM2Q5SZK8 3169 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 COL4A6Q14031 1691 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 HECTD4Q9Y4D8 3996 aa-0.28□□□□□ -2.45
RNU6-40P-201ENST00000384254 DYNC1H1Q14204 4646 aaKnown RBP-0.29□□□□□ -2.46
RNU6-40P-201ENST00000384254 LRBAP50851 2863 aa-0.29□□□□□ -2.46
RNU6-40P-201ENST00000384254 SPTA1P02549 2419 aa-0.29□□□□□ -2.46
RNU6-40P-201ENST00000384254 C6orf201Q7Z4U5 140 aa-0.29□□□□□ -2.46
RNU6-40P-201ENST00000384254 PRKDCP78527 4128 aaKnown RBP-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 MGAQ8IWI9 3026 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 ATP6V1G2-DDX39BF2Z307 99 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 MPC2O95563 127 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 LINC00032P0C843 101 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 RBP2P50120 134 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 GNGT1P63211 74 aa-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 URB1O60287 2271 aaKnown RBP-0.3□□□□□ -2.46
RNU6-40P-201ENST00000384254 H0Y9P7 68 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 ATOX1O00244 68 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 ASIPP42127 132 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 LELP1Q5T871 98 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 TRGV9Q99603 122 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 ADGRG4Q8IZF6 3080 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 C5orf42Q9H799 3197 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
RNU6-40P-201ENST00000384254 KLK9Q2XQG4 91 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 DEFB107AQ8IZN7 70 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 CRIPTQ9P021 101 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 SVEP1Q4LDE5 3571 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 CEP350Q5VT06 3117 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 VCANP13611 3396 aa-0.32□□□□□ -2.46
RNU6-40P-201ENST00000384254 FMN2Q9NZ56 1722 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 PRDM15P57071 1507 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 CSMD2Q7Z408 3487 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 LPAP08519 4548 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 DNAH1Q9P2D7 4330 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 NBASA2RRP1 2371 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 WNK1Q9H4A3 2382 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 APC2O95996 2303 aa-0.33□□□□□ -2.46
RNU6-40P-201ENST00000384254 PCNTO95613 3336 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms