RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 NDUFC2-KCTD14E9PQ53 114 aa12.27□□□□□ -0.44
UBL3-201ENST00000380680 KRTAP24-1Q3LI83 254 aa12.27□□□□□ -0.44
UBL3-201ENST00000380680 ATP5EP2Q5VTU8 51 aa12.27□□□□□ -0.44
UBL3-201ENST00000380680 LITAFQ99732 161 aa12.27□□□□□ -0.44
UBL3-201ENST00000380680 Q6ZRU5 148 aa12.26□□□□□ -0.45
UBL3-201ENST00000380680 Q8NAQ8 132 aa12.26□□□□□ -0.45
UBL3-201ENST00000380680 LOC107984640A0A0U1RRK4 108 aa12.26□□□□□ -0.45
UBL3-201ENST00000380680 UQCRQO14949 82 aa12.26□□□□□ -0.45
UBL3-201ENST00000380680 SETXQ7Z333 2677 aaKnown RBP12.26□□□□□ -0.45
UBL3-201ENST00000380680 C20orf197Q8N268 126 aa12.25□□□□□ -0.45
UBL3-201ENST00000380680 CDIP1Q9H305 208 aa12.25□□□□□ -0.45
UBL3-201ENST00000380680 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
UBL3-201ENST00000380680 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
UBL3-201ENST00000380680 ESRGQ1W209 222 aa12.25□□□□□ -0.45
UBL3-201ENST00000380680 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
UBL3-201ENST00000380680 COL6A5A8TX70 2615 aa12.24□□□□□ -0.45
UBL3-201ENST00000380680 STAB1Q9NY15 2570 aa12.24□□□□□ -0.45
UBL3-201ENST00000380680 M0QXV9 152 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 DHRS4-AS1Q9P1J3 65 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 KRTAP1-1Q07627 177 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 NDUFS5O43920 106 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
UBL3-201ENST00000380680 WFDC9Q8NEX5 89 aa12.23□□□□□ -0.45
UBL3-201ENST00000380680 NDUFB1O75438 58 aa12.22□□□□□ -0.45
UBL3-201ENST00000380680 KRTAP10-3P60369 221 aa12.21□□□□□ -0.45
UBL3-201ENST00000380680 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.46
UBL3-201ENST00000380680 C2orf48Q96LS8 159 aa12.21□□□□□ -0.46
UBL3-201ENST00000380680 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.46
UBL3-201ENST00000380680 PPDPFQ9H3Y8 114 aa12.21□□□□□ -0.46
UBL3-201ENST00000380680 Q6Q795 121 aa12.2□□□□□ -0.46
UBL3-201ENST00000380680 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
UBL3-201ENST00000380680 CR1P17927 2039 aa12.19□□□□□ -0.46
UBL3-201ENST00000380680 LINC00575Q6W349 94 aa12.18□□□□□ -0.46
UBL3-201ENST00000380680 C3orf22Q8N5N4 141 aa12.18□□□□□ -0.46
UBL3-201ENST00000380680 A0A087WVE0 104 aa12.18□□□□□ -0.46
UBL3-201ENST00000380680 Q6JHZ5 121 aa12.18□□□□□ -0.46
UBL3-201ENST00000380680 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
UBL3-201ENST00000380680 H0Y9J4 135 aa12.16□□□□□ -0.46
UBL3-201ENST00000380680 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
UBL3-201ENST00000380680 C6orf48Q9UBA6 75 aa12.16□□□□□ -0.46
UBL3-201ENST00000380680 ITPR2Q14571 2701 aa12.16□□□□□ -0.46
UBL3-201ENST00000380680 LINC01556Q5JQF7 62 aa12.16□□□□□ -0.46
UBL3-201ENST00000380680 LINC00846Q9NV44 126 aa12.15□□□□□ -0.46
UBL3-201ENST00000380680 MP68P56378 58 aa12.14□□□□□ -0.47
UBL3-201ENST00000380680 SERP2Q8N6R1 65 aa12.14□□□□□ -0.47
UBL3-201ENST00000380680 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
UBL3-201ENST00000380680 H3BNG1 76 aa12.11□□□□□ -0.47
UBL3-201ENST00000380680 J3KT08 172 aa12.1□□□□□ -0.47
UBL3-201ENST00000380680 COX7CP15954 63 aa12.1□□□□□ -0.47
UBL3-201ENST00000380680 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
UBL3-201ENST00000380680 WDFY3Q8IZQ1 3526 aa12.09□□□□□ -0.47
UBL3-201ENST00000380680 F8WDY8 70 aa12.08□□□□□ -0.48
UBL3-201ENST00000380680 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
UBL3-201ENST00000380680 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
UBL3-201ENST00000380680 LY6G6CO95867 125 aa12.07□□□□□ -0.48
UBL3-201ENST00000380680 MRPL55Q7Z7F7 128 aaKnown RBP12.07□□□□□ -0.48
UBL3-201ENST00000380680 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
UBL3-201ENST00000380680 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
UBL3-201ENST00000380680 LRCOL1A6NCL2 159 aa12.04□□□□□ -0.48
UBL3-201ENST00000380680 TMEM258P61165 79 aa12.04□□□□□ -0.48
UBL3-201ENST00000380680 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
UBL3-201ENST00000380680 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
UBL3-201ENST00000380680 SNURFQ9Y675 71 aa12.03□□□□□ -0.48
UBL3-201ENST00000380680 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
UBL3-201ENST00000380680 LINC00474Q9P2X8 69 aa12.02□□□□□ -0.49
UBL3-201ENST00000380680 C22orf24Q9Y442 160 aa12.02□□□□□ -0.49
UBL3-201ENST00000380680 KRTAP10-11P60412 298 aa12.01□□□□□ -0.49
UBL3-201ENST00000380680 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
UBL3-201ENST00000380680 Q6ZVQ6 151 aa12□□□□□ -0.49
UBL3-201ENST00000380680 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
UBL3-201ENST00000380680 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
UBL3-201ENST00000380680 PRYO14603 147 aa11.99□□□□□ -0.49
UBL3-201ENST00000380680 KIAA0087Q14695 138 aa11.99□□□□□ -0.49
UBL3-201ENST00000380680 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
UBL3-201ENST00000380680 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
UBL3-201ENST00000380680 IGLV9-49A0A0B4J1Y8 123 aa11.98□□□□□ -0.49
UBL3-201ENST00000380680 HRNRQ86YZ3 2850 aaPredicted RBP11.98□□□□□ -0.49
UBL3-201ENST00000380680 PRLHP81277 87 aa11.97□□□□□ -0.49
UBL3-201ENST00000380680 FAM236DA0A1B0GTK5 79 aa11.97□□□□□ -0.49
UBL3-201ENST00000380680 FAM236CP0DP71 79 aa11.97□□□□□ -0.49
UBL3-201ENST00000380680 HRCT1Q6UXD1 115 aa11.97□□□□□ -0.49
UBL3-201ENST00000380680 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
UBL3-201ENST00000380680 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
UBL3-201ENST00000380680 PRR34Q9NV39 138 aa11.95□□□□□ -0.5
UBL3-201ENST00000380680 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
UBL3-201ENST00000380680 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
UBL3-201ENST00000380680 APCP25054 2843 aa11.93□□□□□ -0.5
UBL3-201ENST00000380680 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
UBL3-201ENST00000380680 SPINK6Q6UWN8 80 aa11.93□□□□□ -0.5
UBL3-201ENST00000380680 Q6ZRP5 223 aa11.93□□□□□ -0.5
UBL3-201ENST00000380680 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
UBL3-201ENST00000380680 TRAV7A0A075B6U4 112 aa11.91□□□□□ -0.5
UBL3-201ENST00000380680 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
UBL3-201ENST00000380680 NF1P21359 2839 aa11.9□□□□□ -0.5
UBL3-201ENST00000380680 Q9BRP9 147 aa11.9□□□□□ -0.5
UBL3-201ENST00000380680 ASPMQ8IZT6 3477 aa11.9□□□□□ -0.5
UBL3-201ENST00000380680 A0A087WSZ3 146 aa11.9□□□□□ -0.51
UBL3-201ENST00000380680 VPREB1P12018 145 aa11.9□□□□□ -0.51
UBL3-201ENST00000380680 MDFIQ99750 246 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms