RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 F8P00451 2351 aa11.1□□□□□ -0.63
COL2A1-202ENST00000380518 PSPHP1O15172 72 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 SBSPONQ8IVN8 264 aa11.09□□□□□ -0.63
COL2A1-202ENST00000380518 ACANP16112 2415 aa11.08□□□□□ -0.64
COL2A1-202ENST00000380518 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
COL2A1-202ENST00000380518 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 H3BNG1 76 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
COL2A1-202ENST00000380518 Q9UF83 564 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 C1orf64Q8NEQ6 169 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 X6R8D5 127 aa11.06□□□□□ -0.64
COL2A1-202ENST00000380518 SPINK1P00995 79 aa11.05□□□□□ -0.64
COL2A1-202ENST00000380518 FAM218AQ96MZ4 157 aa11.05□□□□□ -0.64
COL2A1-202ENST00000380518 A0A1B0GW54 56 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 BCE1O60756 84 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 FSHBP01225 129 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 SMIM29Q86T20 159 aa11.04□□□□□ -0.64
COL2A1-202ENST00000380518 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
COL2A1-202ENST00000380518 CRYGAP11844 174 aa11.01□□□□□ -0.65
COL2A1-202ENST00000380518 MDFIQ99750 246 aa11□□□□□ -0.65
COL2A1-202ENST00000380518 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
COL2A1-202ENST00000380518 KLK9Q2XQG4 91 aa11□□□□□ -0.65
COL2A1-202ENST00000380518 TP53AIP1Q9HCN2 124 aa10.99□□□□□ -0.65
COL2A1-202ENST00000380518 PTPRBP23467 1997 aa10.98□□□□□ -0.65
COL2A1-202ENST00000380518 Q6ZQT0 140 aa10.97□□□□□ -0.65
COL2A1-202ENST00000380518 Q8NBF4 154 aa10.97□□□□□ -0.65
COL2A1-202ENST00000380518 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 IGKV2-30P06310 120 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 Q6ZRX8 168 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 MOBPQ13875 183 aa10.96□□□□□ -0.66
COL2A1-202ENST00000380518 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
COL2A1-202ENST00000380518 Q8NAQ8 132 aa10.93□□□□□ -0.66
COL2A1-202ENST00000380518 LINC00476Q8WZB0 136 aa10.92□□□□□ -0.66
COL2A1-202ENST00000380518 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
COL2A1-202ENST00000380518 SPACA4Q8TDM5 124 aa10.9□□□□□ -0.66
COL2A1-202ENST00000380518 LITAFQ99732 161 aa10.9□□□□□ -0.66
COL2A1-202ENST00000380518 GVQW2A0A096LPI5 108 aaPredicted RBP10.89□□□□□ -0.67
COL2A1-202ENST00000380518 COL4A2P08572 1712 aa10.89□□□□□ -0.67
COL2A1-202ENST00000380518 H3BPC8 53 aa10.89□□□□□ -0.67
COL2A1-202ENST00000380518 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
COL2A1-202ENST00000380518 C16orf90A8MZG2 172 aa10.88□□□□□ -0.67
COL2A1-202ENST00000380518 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
COL2A1-202ENST00000380518 KRTAP24-1Q3LI83 254 aa10.87□□□□□ -0.67
COL2A1-202ENST00000380518 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 ACYP2P14621 99 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 PRO0628Q9UI54 55 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
COL2A1-202ENST00000380518 COL27A1Q8IZC6 1860 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-202ENST00000380518 A0A1B0GU69 56 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 NBDYA0A0U1RRE5 68 aa10.85□□□□□ -0.67
COL2A1-202ENST00000380518 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
COL2A1-202ENST00000380518 VPREB1P12018 145 aa10.83□□□□□ -0.68
COL2A1-202ENST00000380518 IGLV6-57P01721 117 aa10.83□□□□□ -0.68
COL2A1-202ENST00000380518 Q6ZRP5 223 aa10.82□□□□□ -0.68
COL2A1-202ENST00000380518 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
COL2A1-202ENST00000380518 RTL8CO15255 209 aa10.81□□□□□ -0.68
COL2A1-202ENST00000380518 DNAH10OSP0CZ25 163 aa10.8□□□□□ -0.68
COL2A1-202ENST00000380518 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
COL2A1-202ENST00000380518 FLNBO75369 2602 aaKnown RBP10.77□□□□□ -0.69
COL2A1-202ENST00000380518 LINC00313P59037 77 aa10.77□□□□□ -0.69
COL2A1-202ENST00000380518 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
COL2A1-202ENST00000380518 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
COL2A1-202ENST00000380518 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
COL2A1-202ENST00000380518 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
COL2A1-202ENST00000380518 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
COL2A1-202ENST00000380518 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
COL2A1-202ENST00000380518 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
COL2A1-202ENST00000380518 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
COL2A1-202ENST00000380518 A8MWP4 228 aa10.71□□□□□ -0.7
COL2A1-202ENST00000380518 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.7
COL2A1-202ENST00000380518 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 SERTAD4-AS1Q5TG53 156 aa10.7□□□□□ -0.7
COL2A1-202ENST00000380518 PRRC2CQ9Y520 2896 aaKnown RBP10.7□□□□□ -0.7
COL2A1-202ENST00000380518 LOC101927531A0A1B0GV80 90 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 EIF4EBP3O60516 100 aaPredicted RBP10.69□□□□□ -0.7
COL2A1-202ENST00000380518 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
COL2A1-202ENST00000380518 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 PCSK5Q92824 1860 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 K7EQZ3 153 aa10.68□□□□□ -0.7
COL2A1-202ENST00000380518 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
COL2A1-202ENST00000380518 C8orf87E5RJ46 101 aa10.67□□□□□ -0.7
COL2A1-202ENST00000380518 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
COL2A1-202ENST00000380518 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
COL2A1-202ENST00000380518 Q96NJ1 140 aa10.62□□□□□ -0.71
COL2A1-202ENST00000380518 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
COL2A1-202ENST00000380518 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 HECTD1Q9ULT8 2610 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 A0A096LNT2 108 aa10.61□□□□□ -0.71
COL2A1-202ENST00000380518 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 IGFL1Q6UW32 110 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 LINC00612Q8N6U2 182 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 WWC2-AS2Q96NR7 200 aa10.6□□□□□ -0.71
COL2A1-202ENST00000380518 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms