RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 Q9H8V8 135 aa4.64□□□□□ -1.67
RIPK1-202ENST00000380409 ZNF469Q96JG9 3925 aaPredicted RBP4.63□□□□□ -1.67
RIPK1-202ENST00000380409 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
RIPK1-202ENST00000380409 CHCHD7Q9BUK0 85 aa4.63□□□□□ -1.67
RIPK1-202ENST00000380409 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
RIPK1-202ENST00000380409 hDV103S1A0JD37 113 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 C18orf65Q6ZTR6 163 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 H0YGX0 51 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
RIPK1-202ENST00000380409 SPATA3Q8NHX4 192 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 A6NDX4 124 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 CXCL6P80162 114 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 Q8N6K4 173 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 SMIM1B2RUZ4 78 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 LINC01547P58512 204 aaPredicted RBP4.61□□□□□ -1.67
RIPK1-202ENST00000380409 C11orf71Q6IPW1 123 aa4.61□□□□□ -1.67
RIPK1-202ENST00000380409 LOC110117498A0A087WWA1 95 aa4.6□□□□□ -1.67
RIPK1-202ENST00000380409 LCE6AA0A183 80 aa4.6□□□□□ -1.67
RIPK1-202ENST00000380409 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
RIPK1-202ENST00000380409 ANGP03950 147 aaKnown RBP4.6□□□□□ -1.67
RIPK1-202ENST00000380409 COX6A2Q02221 97 aa4.6□□□□□ -1.67
RIPK1-202ENST00000380409 ORMDL1Q9P0S3 153 aa4.6□□□□□ -1.67
RIPK1-202ENST00000380409 K7EQG2 157 aa4.59□□□□□ -1.67
RIPK1-202ENST00000380409 DEFB113Q30KQ7 82 aa4.59□□□□□ -1.67
RIPK1-202ENST00000380409 Q6ZQT0 140 aa4.59□□□□□ -1.67
RIPK1-202ENST00000380409 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.67
RIPK1-202ENST00000380409 MXRA5Q9NR99 2828 aa4.59□□□□□ -1.67
RIPK1-202ENST00000380409 A0A096LNT2 108 aa4.59□□□□□ -1.68
RIPK1-202ENST00000380409 H3BUA1 57 aa4.59□□□□□ -1.68
RIPK1-202ENST00000380409 Q6ZTI0 123 aa4.59□□□□□ -1.68
RIPK1-202ENST00000380409 WFDC10AQ9H1F0 79 aa4.59□□□□□ -1.68
RIPK1-202ENST00000380409 DAD1P61803 113 aa4.58□□□□□ -1.68
RIPK1-202ENST00000380409 A0A087WZ39 114 aa4.58□□□□□ -1.68
RIPK1-202ENST00000380409 INAFM1C9JVW0 142 aa4.58□□□□□ -1.68
RIPK1-202ENST00000380409 LECT2O14960 151 aa4.58□□□□□ -1.68
RIPK1-202ENST00000380409 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
RIPK1-202ENST00000380409 LINC00242Q5T6M2 205 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 A8MU10 97 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 GYPEP15421 78 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 C9orf66Q5T8R8 295 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 PRYO14603 147 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
RIPK1-202ENST00000380409 M0R2N4 97 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 NREPQ16612 68 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 DEFB135Q30KP9 77 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 LINC00467Q9BRT7 94 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 M0R378 163 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
RIPK1-202ENST00000380409 Q6ZVQ6 151 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 PHF5AQ7RTV0 110 aaKnown RBP4.56□□□□□ -1.68
RIPK1-202ENST00000380409 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 SLPIP03973 132 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 Q8N3U1 123 aa4.56□□□□□ -1.68
RIPK1-202ENST00000380409 FBN1P35555 2871 aaKnown RBP4.56□□□□□ -1.68
RIPK1-202ENST00000380409 AKAP9Q99996 3911 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 A6NN06 94 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 TRAV22A0A0B4J277 110 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 IGHV4-31P0DP07 118 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 HAMPP81172 84 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 MDFIQ99750 246 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 SND1-IT1Q9HBX3 110 aa4.55□□□□□ -1.68
RIPK1-202ENST00000380409 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
RIPK1-202ENST00000380409 Q8N814 137 aa4.54□□□□□ -1.68
RIPK1-202ENST00000380409 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
RIPK1-202ENST00000380409 LOC100131303A0A0U1RQF7 123 aa4.54□□□□□ -1.68
RIPK1-202ENST00000380409 DNAJC9-AS1A6NH13 148 aa4.54□□□□□ -1.68
RIPK1-202ENST00000380409 K7EQD1 137 aa4.54□□□□□ -1.68
RIPK1-202ENST00000380409 CMC4P56277 68 aaPredicted RBP4.54□□□□□ -1.68
RIPK1-202ENST00000380409 TMEM256-PLSCR3K7ERE1 68 aa4.53□□□□□ -1.68
RIPK1-202ENST00000380409 FUSP35637 526 aaKnown RBP eCLIP4.53□□□□□ -1.68
RIPK1-202ENST00000380409 Q5VV11 94 aa4.53□□□□□ -1.68
RIPK1-202ENST00000380409 DEFB114Q30KQ6 69 aa4.53□□□□□ -1.68
RIPK1-202ENST00000380409 CCL18P55774 89 aa4.53□□□□□ -1.68
RIPK1-202ENST00000380409 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
RIPK1-202ENST00000380409 CYP4F30PQ9H0H9 118 aa4.52□□□□□ -1.69
RIPK1-202ENST00000380409 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
RIPK1-202ENST00000380409 DEFB105AQ8NG35 78 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 Q6YL49 198 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 C16orf90A8MZG2 172 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 BPY2O14599 106 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 COX7B2Q8TF08 81 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 TENM1Q9UKZ4 2725 aa4.51□□□□□ -1.69
RIPK1-202ENST00000380409 IGKV2D-24A0A075B6R9 120 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 Q6ZSN1 163 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 TRBV10-1A0A0K0K1A3 114 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 UBE2BP63146 152 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 PSCAO43653 123 aa4.5□□□□□ -1.69
RIPK1-202ENST00000380409 NDUFS5O43920 106 aa4.49□□□□□ -1.69
RIPK1-202ENST00000380409 IGLV1-40P01703 118 aa4.49□□□□□ -1.69
RIPK1-202ENST00000380409 C4orf3Q8WVX3 66 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms