RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 NDUFC2O95298 119 aa10.17□□□□□ -0.78
PRNP-201ENST00000379440 LINC00158P58513 81 aa10.17□□□□□ -0.78
PRNP-201ENST00000379440 REG3AQ06141 175 aa10.17□□□□□ -0.78
PRNP-201ENST00000379440 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
PRNP-201ENST00000379440 CLEC2BQ92478 149 aa10.16□□□□□ -0.78
PRNP-201ENST00000379440 SERP1Q9Y6X1 66 aa10.16□□□□□ -0.78
PRNP-201ENST00000379440 MAST4O15021 2626 aa10.16□□□□□ -0.78
PRNP-201ENST00000379440 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
PRNP-201ENST00000379440 CHCHD10Q8WYQ3 142 aaPredicted RBP10.15□□□□□ -0.78
PRNP-201ENST00000379440 LELP1Q5T871 98 aa10.15□□□□□ -0.78
PRNP-201ENST00000379440 LST1O00453 97 aa10.14□□□□□ -0.79
PRNP-201ENST00000379440 EPM2AB3EWF7 344 aa10.14□□□□□ -0.79
PRNP-201ENST00000379440 CD164L2Q6UWJ8 174 aa10.13□□□□□ -0.79
PRNP-201ENST00000379440 SMIM26A0A096LP01 95 aa10.13□□□□□ -0.79
PRNP-201ENST00000379440 IBA57-AS1B1ANH7 110 aa10.12□□□□□ -0.79
PRNP-201ENST00000379440 Q6ZTC4 211 aa10.12□□□□□ -0.79
PRNP-201ENST00000379440 Q8IZM0 81 aa10.12□□□□□ -0.79
PRNP-201ENST00000379440 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
PRNP-201ENST00000379440 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
PRNP-201ENST00000379440 COX7A2LO14548 114 aa10.11□□□□□ -0.79
PRNP-201ENST00000379440 CCL18P55774 89 aa10.11□□□□□ -0.79
PRNP-201ENST00000379440 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
PRNP-201ENST00000379440 TENM3Q9P273 2699 aa10.11□□□□□ -0.79
PRNP-201ENST00000379440 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
PRNP-201ENST00000379440 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
PRNP-201ENST00000379440 KIAA0087Q14695 138 aa10.1□□□□□ -0.79
PRNP-201ENST00000379440 KPRPQ5T749 579 aaPredicted RBP10.1□□□□□ -0.79
PRNP-201ENST00000379440 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
PRNP-201ENST00000379440 COL6A5A8TX70 2615 aa10.09□□□□□ -0.79
PRNP-201ENST00000379440 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
PRNP-201ENST00000379440 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
PRNP-201ENST00000379440 BAHCC1Q9P281 2608 aa10.08□□□□□ -0.8
PRNP-201ENST00000379440 DNAH3Q8TD57 4116 aa10.08□□□□□ -0.8
PRNP-201ENST00000379440 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
PRNP-201ENST00000379440 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
PRNP-201ENST00000379440 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
PRNP-201ENST00000379440 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
PRNP-201ENST00000379440 NANOS2P60321 138 aaKnown RBP10.07□□□□□ -0.8
PRNP-201ENST00000379440 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
PRNP-201ENST00000379440 CRPP02741 224 aa10.06□□□□□ -0.8
PRNP-201ENST00000379440 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
PRNP-201ENST00000379440 PRR34Q9NV39 138 aa10.06□□□□□ -0.8
PRNP-201ENST00000379440 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
PRNP-201ENST00000379440 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
PRNP-201ENST00000379440 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
PRNP-201ENST00000379440 H3BNG1 76 aa10.03□□□□□ -0.8
PRNP-201ENST00000379440 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
PRNP-201ENST00000379440 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
PRNP-201ENST00000379440 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
PRNP-201ENST00000379440 ESRGQ1W209 222 aa10.02□□□□□ -0.81
PRNP-201ENST00000379440 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
PRNP-201ENST00000379440 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
PRNP-201ENST00000379440 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
PRNP-201ENST00000379440 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
PRNP-201ENST00000379440 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
PRNP-201ENST00000379440 SPAG11BQ08648 103 aa10.01□□□□□ -0.81
PRNP-201ENST00000379440 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
PRNP-201ENST00000379440 IGKV3D-7A0A0C4DH55 119 aa10□□□□□ -0.81
PRNP-201ENST00000379440 CD164Q04900 197 aa10□□□□□ -0.81
PRNP-201ENST00000379440 A0A087WVE0 104 aa9.99□□□□□ -0.81
PRNP-201ENST00000379440 Q6JHZ5 121 aa9.99□□□□□ -0.81
PRNP-201ENST00000379440 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
PRNP-201ENST00000379440 COX17Q14061 63 aa9.98□□□□□ -0.81
PRNP-201ENST00000379440 NBEAL1Q6ZS30 2694 aa9.98□□□□□ -0.81
PRNP-201ENST00000379440 Q9HAA7 133 aa9.96□□□□□ -0.81
PRNP-201ENST00000379440 K7EIL1 84 aa9.96□□□□□ -0.82
PRNP-201ENST00000379440 Q8NDZ9 215 aa9.96□□□□□ -0.82
PRNP-201ENST00000379440 A0A087WYN8 130 aa9.95□□□□□ -0.82
PRNP-201ENST00000379440 GHRHP01286 108 aa9.95□□□□□ -0.82
PRNP-201ENST00000379440 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
PRNP-201ENST00000379440 H7BZZ5 65 aa9.94□□□□□ -0.82
PRNP-201ENST00000379440 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
PRNP-201ENST00000379440 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
PRNP-201ENST00000379440 DNAL4O96015 105 aa9.93□□□□□ -0.82
PRNP-201ENST00000379440 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
PRNP-201ENST00000379440 HUWE1Q7Z6Z7 4374 aaKnown RBP9.92□□□□□ -0.82
PRNP-201ENST00000379440 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
PRNP-201ENST00000379440 NCR3O14931 201 aa9.91□□□□□ -0.82
PRNP-201ENST00000379440 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
PRNP-201ENST00000379440 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
PRNP-201ENST00000379440 CCKP06307 115 aa9.91□□□□□ -0.82
PRNP-201ENST00000379440 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
PRNP-201ENST00000379440 TRBV7-6A0A0J9YX20 115 aa9.9□□□□□ -0.82
PRNP-201ENST00000379440 H0YGX0 51 aa9.9□□□□□ -0.82
PRNP-201ENST00000379440 LINC01556Q5JQF7 62 aa9.89□□□□□ -0.83
PRNP-201ENST00000379440 LECT2O14960 151 aa9.89□□□□□ -0.83
PRNP-201ENST00000379440 MGAM2Q2M2H8 2515 aa9.89□□□□□ -0.83
PRNP-201ENST00000379440 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
PRNP-201ENST00000379440 PRR15Q8IV56 129 aa9.88□□□□□ -0.83
PRNP-201ENST00000379440 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
PRNP-201ENST00000379440 Q6ZRU5 148 aa9.88□□□□□ -0.83
PRNP-201ENST00000379440 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
PRNP-201ENST00000379440 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
PRNP-201ENST00000379440 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
PRNP-201ENST00000379440 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
PRNP-201ENST00000379440 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
PRNP-201ENST00000379440 SLPIP03973 132 aa9.87□□□□□ -0.83
PRNP-201ENST00000379440 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
PRNP-201ENST00000379440 TRAV23DV6A0A075B6W5 121 aa9.85□□□□□ -0.83
PRNP-201ENST00000379440 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms