RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
CDKAL1-202ENST00000378610 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
CDKAL1-202ENST00000378610 PTPRQQ9UMZ3 2332 aa4.44□□□□□ -1.7
CDKAL1-202ENST00000378610 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDKAL1-202ENST00000378610 OTOGLQ3ZCN5 2332 aa4.43□□□□□ -1.7
CDKAL1-202ENST00000378610 MSMBP08118 114 aa4.43□□□□□ -1.7
CDKAL1-202ENST00000378610 LINC00612Q8N6U2 182 aa4.43□□□□□ -1.7
CDKAL1-202ENST00000378610 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
CDKAL1-202ENST00000378610 A8MUN3 132 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 COX7BP24311 80 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 COL12A1Q99715 3063 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 ANKHD1Q8IWZ3 2542 aaKnown RBP4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 CEP250Q9BV73 2442 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 A0A0J9YWU9 116 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 ANKRD11Q6UB99 2663 aaPredicted RBP4.42□□□□□ -1.7
CDKAL1-202ENST00000378610 ELOF1P60002 83 aaKnown RBP4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 CSMD2Q7Z408 3487 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 EP300Q09472 2414 aaPredicted RBP4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 TRGV2A0A075B6R0 118 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 GVQW2A0A096LPI5 108 aaPredicted RBP4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 A0A1B0GW54 56 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 B4DSR2 109 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 Q6ZQY7 126 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 C4orf3Q8WVX3 66 aa4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 KMT2BQ9UMN6 2715 aaPredicted RBP4.41□□□□□ -1.7
CDKAL1-202ENST00000378610 ANK3Q12955 4377 aaKnown RBP4.4□□□□□ -1.71
CDKAL1-202ENST00000378610 TRGV4A0A0C4DH28 118 aa4.4□□□□□ -1.71
CDKAL1-202ENST00000378610 PRR4Q16378 134 aa4.4□□□□□ -1.71
CDKAL1-202ENST00000378610 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
CDKAL1-202ENST00000378610 HIGD2AQ9BW72 106 aa4.4□□□□□ -1.71
CDKAL1-202ENST00000378610 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 PCNX1Q96RV3 2341 aa4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 LINC01006Q8NI28 216 aa4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 SPTBN1Q01082 2364 aaKnown RBP4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 DEFB112Q30KQ8 113 aa4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 CCL19Q99731 98 aa4.39□□□□□ -1.71
CDKAL1-202ENST00000378610 TTC28Q96AY4 2481 aa4.38□□□□□ -1.71
CDKAL1-202ENST00000378610 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
CDKAL1-202ENST00000378610 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
CDKAL1-202ENST00000378610 IGLV5-48A0A075B6I7 105 aa4.37□□□□□ -1.71
CDKAL1-202ENST00000378610 PSCAO43653 123 aa4.37□□□□□ -1.71
CDKAL1-202ENST00000378610 CMC4P56277 68 aaPredicted RBP4.37□□□□□ -1.71
CDKAL1-202ENST00000378610 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
CDKAL1-202ENST00000378610 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
CDKAL1-202ENST00000378610 DIRC1Q969H9 104 aa4.36□□□□□ -1.71
CDKAL1-202ENST00000378610 KRTAP4-16G5E9R7 235 aaPredicted RBP4.36□□□□□ -1.71
CDKAL1-202ENST00000378610 DEFB136Q30KP8 78 aa4.36□□□□□ -1.71
CDKAL1-202ENST00000378610 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 SYCNQ0VAF6 134 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 Q5VV11 94 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 Q8N9L7 120 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 LINC00588Q9Y4M8 146 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 NCOR1O75376 2440 aa4.35□□□□□ -1.71
CDKAL1-202ENST00000378610 ZNF292O60281 2723 aa4.34□□□□□ -1.71
CDKAL1-202ENST00000378610 LINC00269Q8N2A0 174 aa4.34□□□□□ -1.71
CDKAL1-202ENST00000378610 MAP1BP46821 2468 aaKnown RBP4.34□□□□□ -1.71
CDKAL1-202ENST00000378610 RP1L1Q8IWN7 2480 aaPredicted RBP4.34□□□□□ -1.71
CDKAL1-202ENST00000378610 SMIM29Q86T20 159 aa4.34□□□□□ -1.72
CDKAL1-202ENST00000378610 MAP1AP78559 2803 aaPredicted RBP4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 PIEZO1Q92508 2521 aa4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 TPRP12270 2363 aaKnown RBP4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 BDP1A6H8Y1 2624 aa4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 CHD6Q8TD26 2715 aa4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 SPRR4Q96PI1 79 aa4.33□□□□□ -1.72
CDKAL1-202ENST00000378610 PHF5AQ7RTV0 110 aaKnown RBP4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 Q8NBF4 154 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 PRR34Q9NV39 138 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 Q9BRP9 147 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 CELSR2Q9HCU4 2923 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 IGLV8-61A0A075B6I0 122 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
CDKAL1-202ENST00000378610 CYSRT1A8MQ03 144 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 DSCR10P59022 87 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 ETDCA0A1B0GVM5 59 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 A6NN06 94 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 UBE2BP63146 152 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 KCNQ1DNQ9H478 68 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 COL6A6A6NMZ7 2263 aa4.31□□□□□ -1.72
CDKAL1-202ENST00000378610 M0R378 163 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 SORL1Q92673 2214 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 A8MU10 97 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.3□□□□□ -1.728e-9■■■■■ 36
CDKAL1-202ENST00000378610 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 A0A087X002 238 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 C16orf90A8MZG2 172 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 NDUFB1O75438 58 aa4.3□□□□□ -1.72
CDKAL1-202ENST00000378610 Q8N377 158 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms