RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 IGHV6-1A0A0B4J1U7 121 aa13.39□□□□□ -0.27
PCDH8-202ENST00000377942 Q6ZVQ6 151 aa13.37□□□□□ -0.27
PCDH8-202ENST00000377942 SOSTDC1Q6X4U4 206 aa13.37□□□□□ -0.27
PCDH8-202ENST00000377942 Q8N3U1 123 aa13.37□□□□□ -0.27
PCDH8-202ENST00000377942 PRR15LQ9BU68 103 aa13.36□□□□□ -0.27
PCDH8-202ENST00000377942 C16orf90A8MZG2 172 aa13.36□□□□□ -0.27
PCDH8-202ENST00000377942 K7EIL1 84 aa13.36□□□□□ -0.27
PCDH8-202ENST00000377942 KIAA0087Q14695 138 aa13.35□□□□□ -0.27
PCDH8-202ENST00000377942 LINC01547P58512 204 aaPredicted RBP13.34□□□□□ -0.27
PCDH8-202ENST00000377942 KRTAP10-11P60412 298 aa13.34□□□□□ -0.27
PCDH8-202ENST00000377942 CEP350Q5VT06 3117 aa13.34□□□□□ -0.27
PCDH8-202ENST00000377942 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
PCDH8-202ENST00000377942 ELOF1P60002 83 aaKnown RBP13.34□□□□□ -0.27
PCDH8-202ENST00000377942 A0A1B0GW54 56 aa13.33□□□□□ -0.28
PCDH8-202ENST00000377942 RTL8CO15255 209 aa13.33□□□□□ -0.28
PCDH8-202ENST00000377942 LINC00846Q9NV44 126 aa13.33□□□□□ -0.28
PCDH8-202ENST00000377942 A0A087WVE0 104 aa13.32□□□□□ -0.28
PCDH8-202ENST00000377942 LINC00208Q96KT6 92 aa13.32□□□□□ -0.28
PCDH8-202ENST00000377942 KRTAP1-1Q07627 177 aa13.32□□□□□ -0.28
PCDH8-202ENST00000377942 SPTSSBQ8NFR3 76 aa13.32□□□□□ -0.28
PCDH8-202ENST00000377942 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
PCDH8-202ENST00000377942 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
PCDH8-202ENST00000377942 CHD7Q9P2D1 2997 aa13.3□□□□□ -0.28
PCDH8-202ENST00000377942 MPLKIPQ8TAP9 179 aa13.3□□□□□ -0.28
PCDH8-202ENST00000377942 CXCL6P80162 114 aa13.29□□□□□ -0.28
PCDH8-202ENST00000377942 K7ERS5 55 aa13.29□□□□□ -0.28
PCDH8-202ENST00000377942 Q6ZRX8 168 aa13.29□□□□□ -0.28
PCDH8-202ENST00000377942 CCDC179H3BU77 68 aa13.28□□□□□ -0.28
PCDH8-202ENST00000377942 SVIPQ8NHG7 77 aa13.27□□□□□ -0.28
PCDH8-202ENST00000377942 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.28
PCDH8-202ENST00000377942 PRR4Q16378 134 aa13.27□□□□□ -0.29
PCDH8-202ENST00000377942 SERP1Q9Y6X1 66 aa13.27□□□□□ -0.29
PCDH8-202ENST00000377942 Q6ZRP5 223 aa13.26□□□□□ -0.29
PCDH8-202ENST00000377942 PHF5AQ7RTV0 110 aaKnown RBP13.26□□□□□ -0.29
PCDH8-202ENST00000377942 HCG22E2RYF7 251 aa13.25□□□□□ -0.29
PCDH8-202ENST00000377942 UTRNP46939 3433 aa13.25□□□□□ -0.29
PCDH8-202ENST00000377942 BRK1Q8WUW1 75 aa13.24□□□□□ -0.29
PCDH8-202ENST00000377942 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
PCDH8-202ENST00000377942 DEFB116Q30KQ4 102 aa13.22□□□□□ -0.29
PCDH8-202ENST00000377942 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
PCDH8-202ENST00000377942 LITAFQ99732 161 aa13.21□□□□□ -0.29
PCDH8-202ENST00000377942 MOBPQ13875 183 aa13.21□□□□□ -0.29
PCDH8-202ENST00000377942 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
PCDH8-202ENST00000377942 VPREB1P12018 145 aa13.2□□□□□ -0.3
PCDH8-202ENST00000377942 TM2D3Q9BRN9 247 aa13.2□□□□□ -0.3
PCDH8-202ENST00000377942 FAM229AH3BQW9 127 aa13.19□□□□□ -0.3
PCDH8-202ENST00000377942 CHD9Q3L8U1 2897 aa13.19□□□□□ -0.3
PCDH8-202ENST00000377942 EPM2AB3EWF7 344 aa13.19□□□□□ -0.3
PCDH8-202ENST00000377942 CRYGAP11844 174 aa13.18□□□□□ -0.3
PCDH8-202ENST00000377942 TRBV7-7A0A0K0K1E9 115 aa13.18□□□□□ -0.3
PCDH8-202ENST00000377942 BCE1O60756 84 aa13.18□□□□□ -0.3
PCDH8-202ENST00000377942 H0Y9P7 68 aa13.18□□□□□ -0.3
PCDH8-202ENST00000377942 Q8NBF4 154 aa13.17□□□□□ -0.3
PCDH8-202ENST00000377942 MGAM2Q2M2H8 2515 aa13.17□□□□□ -0.3
PCDH8-202ENST00000377942 IGLV6-57P01721 117 aa13.16□□□□□ -0.3
PCDH8-202ENST00000377942 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
PCDH8-202ENST00000377942 SMCPP49901 116 aaPredicted RBP13.16□□□□□ -0.3
PCDH8-202ENST00000377942 LOC110117498A0A087WWA1 95 aa13.15□□□□□ -0.3
PCDH8-202ENST00000377942 PRO0461Q9UI25 63 aa13.14□□□□□ -0.31
PCDH8-202ENST00000377942 LINC00476Q8WZB0 136 aa13.13□□□□□ -0.31
PCDH8-202ENST00000377942 SMIM26A0A096LP01 95 aa13.12□□□□□ -0.31
PCDH8-202ENST00000377942 CDIP1Q9H305 208 aa13.12□□□□□ -0.31
PCDH8-202ENST00000377942 CHTF8P0CG12 524 aa13.12□□□□□ -0.31
PCDH8-202ENST00000377942 TMEM254Q8TBM7 123 aa13.12□□□□□ -0.31
PCDH8-202ENST00000377942 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
PCDH8-202ENST00000377942 Q6ZQT0 140 aa13.11□□□□□ -0.31
PCDH8-202ENST00000377942 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
PCDH8-202ENST00000377942 hDV103S1A0JD37 113 aa13.1□□□□□ -0.31
PCDH8-202ENST00000377942 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
PCDH8-202ENST00000377942 TP53AIP1Q9HCN2 124 aa13.09□□□□□ -0.31
PCDH8-202ENST00000377942 PCOTHQ58A44 107 aa13.08□□□□□ -0.32
PCDH8-202ENST00000377942 KCNQ1DNQ9H478 68 aa13.08□□□□□ -0.32
PCDH8-202ENST00000377942 RETNLBQ9BQ08 111 aa13.07□□□□□ -0.32
PCDH8-202ENST00000377942 ST20-AS1Q8NBB2 130 aa13.07□□□□□ -0.32
PCDH8-202ENST00000377942 IGLV1-50A0A075B6I6 118 aa13.06□□□□□ -0.32
PCDH8-202ENST00000377942 A6NED7 52 aa13.06□□□□□ -0.32
PCDH8-202ENST00000377942 C15orf56Q8N910 161 aa13.06□□□□□ -0.32
PCDH8-202ENST00000377942 TYMSOSQ8TAI1 123 aa13.06□□□□□ -0.32
PCDH8-202ENST00000377942 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
PCDH8-202ENST00000377942 C1orf64Q8NEQ6 169 aa13.03□□□□□ -0.32
PCDH8-202ENST00000377942 FAM168BA1KXE4 195 aa13.02□□□□□ -0.32
PCDH8-202ENST00000377942 HTTP42858 3142 aa13.02□□□□□ -0.33
PCDH8-202ENST00000377942 TLX1NBP0CAT3 122 aa13.02□□□□□ -0.33
PCDH8-202ENST00000377942 SMIM29Q86T20 159 aa13.02□□□□□ -0.33
PCDH8-202ENST00000377942 TRBV7-4A0A0J9YYF1 115 aa13.01□□□□□ -0.33
PCDH8-202ENST00000377942 PLA2G1BP04054 148 aaKnown RBP13.01□□□□□ -0.33
PCDH8-202ENST00000377942 CFAP46Q8IYW2 2715 aa13□□□□□ -0.33
PCDH8-202ENST00000377942 C9orf163Q8N9P6 203 aa12.99□□□□□ -0.33
PCDH8-202ENST00000377942 LINC00528Q8N1L1 170 aa12.99□□□□□ -0.33
PCDH8-202ENST00000377942 A0A087WTM6 91 aa12.99□□□□□ -0.33
PCDH8-202ENST00000377942 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
PCDH8-202ENST00000377942 ATRQ13535 2644 aa12.98□□□□□ -0.33
PCDH8-202ENST00000377942 APLNQ9ULZ1 77 aa12.98□□□□□ -0.33
PCDH8-202ENST00000377942 ZNF292O60281 2723 aa12.97□□□□□ -0.33
PCDH8-202ENST00000377942 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
PCDH8-202ENST00000377942 TRANK1O15050 2925 aa12.96□□□□□ -0.33
PCDH8-202ENST00000377942 IGKV2D-30A0A075B6S6 120 aa12.95□□□□□ -0.34
PCDH8-202ENST00000377942 IGKV2-30P06310 120 aa12.95□□□□□ -0.34
PCDH8-202ENST00000377942 WIPF1O43516 503 aa12.94□□□□□ -0.34
PCDH8-202ENST00000377942 H3BPC8 53 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms