RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 HIGD2AQ9BW72 106 aa8.54□□□□□ -1.04
CLCN6-204ENST00000376491 SEC11CQ9BY50 192 aa8.54□□□□□ -1.04
CLCN6-204ENST00000376491 PPDPFQ9H3Y8 114 aa8.54□□□□□ -1.04
CLCN6-204ENST00000376491 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
CLCN6-204ENST00000376491 IFITM2Q01629 132 aa8.52□□□□□ -1.05
CLCN6-204ENST00000376491 C18orf32Q8TCD1 76 aa8.52□□□□□ -1.05
CLCN6-204ENST00000376491 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
CLCN6-204ENST00000376491 HBDP02042 147 aa8.51□□□□□ -1.05
CLCN6-204ENST00000376491 LINC00614P0C842 121 aa8.51□□□□□ -1.05
CLCN6-204ENST00000376491 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
CLCN6-204ENST00000376491 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
CLCN6-204ENST00000376491 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
CLCN6-204ENST00000376491 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
CLCN6-204ENST00000376491 LINC00158P58513 81 aa8.49□□□□□ -1.05
CLCN6-204ENST00000376491 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
CLCN6-204ENST00000376491 C10orf91Q5T1B1 145 aa8.48□□□□□ -1.05
CLCN6-204ENST00000376491 RPS10P5Q9NQ39 176 aa8.48□□□□□ -1.05
CLCN6-204ENST00000376491 TRAPPC1Q9Y5R8 145 aa8.48□□□□□ -1.05
CLCN6-204ENST00000376491 DAND5Q8N907 189 aa8.47□□□□□ -1.05
CLCN6-204ENST00000376491 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
CLCN6-204ENST00000376491 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
CLCN6-204ENST00000376491 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.06
CLCN6-204ENST00000376491 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
CLCN6-204ENST00000376491 TMEM223A0PJW6 202 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 SPRR1AP35321 89 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 RHEBQ15382 184 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 COMMD7Q86VX2 200 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 Q8NBF4 154 aa8.45□□□□□ -1.06
CLCN6-204ENST00000376491 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
CLCN6-204ENST00000376491 PRYO14603 147 aa8.44□□□□□ -1.06
CLCN6-204ENST00000376491 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
CLCN6-204ENST00000376491 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
CLCN6-204ENST00000376491 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
CLCN6-204ENST00000376491 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
CLCN6-204ENST00000376491 NCR3O14931 201 aa8.43□□□□□ -1.06
CLCN6-204ENST00000376491 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
CLCN6-204ENST00000376491 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
CLCN6-204ENST00000376491 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
CLCN6-204ENST00000376491 KRTAP4-1Q9BYQ7 146 aa8.42□□□□□ -1.06
CLCN6-204ENST00000376491 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
CLCN6-204ENST00000376491 MIR7-3HGQ8N6C7 128 aa8.41□□□□□ -1.06
CLCN6-204ENST00000376491 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
CLCN6-204ENST00000376491 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 ATP6V1G1O75348 118 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 SPINK1P00995 79 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
CLCN6-204ENST00000376491 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
CLCN6-204ENST00000376491 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
CLCN6-204ENST00000376491 GAGE2AQ6NT46 116 aa8.37□□□□□ -1.07
CLCN6-204ENST00000376491 B5MCH6 92 aa8.36□□□□□ -1.07
CLCN6-204ENST00000376491 HERV-K104P63124 156 aa8.36□□□□□ -1.07
CLCN6-204ENST00000376491 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
CLCN6-204ENST00000376491 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
CLCN6-204ENST00000376491 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
CLCN6-204ENST00000376491 MOBPQ13875 183 aa8.34□□□□□ -1.07
CLCN6-204ENST00000376491 Q8N377 158 aa8.34□□□□□ -1.07
CLCN6-204ENST00000376491 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
CLCN6-204ENST00000376491 TSPEAR-AS2P59090 65 aa8.33□□□□□ -1.08
CLCN6-204ENST00000376491 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
CLCN6-204ENST00000376491 Q9BRP9 147 aa8.33□□□□□ -1.08
CLCN6-204ENST00000376491 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 APOC3P02656 99 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
CLCN6-204ENST00000376491 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
CLCN6-204ENST00000376491 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
CLCN6-204ENST00000376491 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
CLCN6-204ENST00000376491 DDTP30046 118 aa8.31□□□□□ -1.08
CLCN6-204ENST00000376491 MAP1LC3CQ9BXW4 147 aa8.31□□□□□ -1.08
CLCN6-204ENST00000376491 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
CLCN6-204ENST00000376491 SNAPINO95295 136 aa8.29□□□□□ -1.08
CLCN6-204ENST00000376491 S100A12P80511 92 aa8.29□□□□□ -1.08
CLCN6-204ENST00000376491 Q6ZRX8 168 aa8.29□□□□□ -1.08
CLCN6-204ENST00000376491 H0Y8G0 127 aa8.28□□□□□ -1.08
CLCN6-204ENST00000376491 LEPROTO15243 131 aa8.28□□□□□ -1.08
CLCN6-204ENST00000376491 HSBP1O75506 76 aa8.28□□□□□ -1.08
CLCN6-204ENST00000376491 SLC25A20O43772 301 aa8.27□□□□□ -1.09
CLCN6-204ENST00000376491 XP32Q5T750 250 aa8.27□□□□□ -1.09
CLCN6-204ENST00000376491 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
CLCN6-204ENST00000376491 SVBPQ8N300 66 aa8.27□□□□□ -1.09
CLCN6-204ENST00000376491 IGLV6-57P01721 117 aa8.25□□□□□ -1.09
CLCN6-204ENST00000376491 SPANXB1Q9NS25 103 aaPredicted RBP8.25□□□□□ -1.09
CLCN6-204ENST00000376491 J3QQQ9 107 aa8.24□□□□□ -1.09
CLCN6-204ENST00000376491 LINC00310P59036 64 aa8.24□□□□□ -1.09
CLCN6-204ENST00000376491 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
CLCN6-204ENST00000376491 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
CLCN6-204ENST00000376491 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
CLCN6-204ENST00000376491 NDUFC2O95298 119 aa8.23□□□□□ -1.09
CLCN6-204ENST00000376491 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
CLCN6-204ENST00000376491 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
CLCN6-204ENST00000376491 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CLCN6-204ENST00000376491 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
CLCN6-204ENST00000376491 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
CLCN6-204ENST00000376491 TRAV23DV6A0A075B6W5 121 aa8.21□□□□□ -1.1
CLCN6-204ENST00000376491 SERF1AO75920 110 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms