RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CBY1Q9Y3M2 126 aa6.82□□□□□ -1.32
PDPN-203ENST00000376061 A0A087WTM6 91 aa6.81□□□□□ -1.32
PDPN-203ENST00000376061 FXYD2P54710 66 aa6.81□□□□□ -1.32
PDPN-203ENST00000376061 NPC2P61916 151 aa6.81□□□□□ -1.32
PDPN-203ENST00000376061 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
PDPN-203ENST00000376061 SOSTDC1Q6X4U4 206 aa6.81□□□□□ -1.32
PDPN-203ENST00000376061 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
PDPN-203ENST00000376061 BATFQ16520 125 aa6.8□□□□□ -1.32
PDPN-203ENST00000376061 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
PDPN-203ENST00000376061 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
PDPN-203ENST00000376061 LINC00308Q8TCZ7 52 aa6.8□□□□□ -1.32
PDPN-203ENST00000376061 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
PDPN-203ENST00000376061 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
PDPN-203ENST00000376061 RTL8CO15255 209 aa6.79□□□□□ -1.32
PDPN-203ENST00000376061 IFITM1P13164 125 aa6.79□□□□□ -1.32
PDPN-203ENST00000376061 Q8N814 137 aa6.79□□□□□ -1.32
PDPN-203ENST00000376061 NDUFC2-KCTD14E9PQ53 114 aa6.78□□□□□ -1.32
PDPN-203ENST00000376061 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
PDPN-203ENST00000376061 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
PDPN-203ENST00000376061 FRAS1Q86XX4 4008 aa6.78□□□□□ -1.32
PDPN-203ENST00000376061 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
PDPN-203ENST00000376061 TLX1NBP0CAT3 122 aa6.77□□□□□ -1.33
PDPN-203ENST00000376061 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
PDPN-203ENST00000376061 SERTAD4-AS1Q5TG53 156 aa6.77□□□□□ -1.33
PDPN-203ENST00000376061 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
PDPN-203ENST00000376061 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
PDPN-203ENST00000376061 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 K7ERJ3 54 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
PDPN-203ENST00000376061 Q6ZRP5 223 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 HYDINQ4G0P3 5121 aa6.75□□□□□ -1.33
PDPN-203ENST00000376061 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
PDPN-203ENST00000376061 A0A1B0GWB2 263 aa6.74□□□□□ -1.33
PDPN-203ENST00000376061 A6NDN8 102 aa6.74□□□□□ -1.33
PDPN-203ENST00000376061 GAGE2EQ4V326 116 aa6.74□□□□□ -1.33
PDPN-203ENST00000376061 LBHQ53QV2 105 aaPredicted RBP6.74□□□□□ -1.33
PDPN-203ENST00000376061 GAGE2DQ9UEU5 116 aa6.74□□□□□ -1.33
PDPN-203ENST00000376061 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
PDPN-203ENST00000376061 Q8NDZ9 215 aa6.73□□□□□ -1.33
PDPN-203ENST00000376061 FAT2Q9NYQ8 4349 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 A0A0B4J2C4 111 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 H3BS24 57 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 CFC1P0CG37 223 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
PDPN-203ENST00000376061 COL5A1-AS1Q5SY13 56 aa6.72□□□□□ -1.33
PDPN-203ENST00000376061 C9orf129Q5T035 196 aaKnown RBP6.72□□□□□ -1.33
PDPN-203ENST00000376061 IGKV2-28A0A075B6P5 120 aa6.71□□□□□ -1.33
PDPN-203ENST00000376061 A0A096LNI7 61 aa6.71□□□□□ -1.33
PDPN-203ENST00000376061 IGKV2D-28P01615 120 aa6.71□□□□□ -1.33
PDPN-203ENST00000376061 GAGE2BQ13066 116 aa6.71□□□□□ -1.33
PDPN-203ENST00000376061 LINC01620Q4KN68 170 aa6.71□□□□□ -1.33
PDPN-203ENST00000376061 KMT2CQ8NEZ4 4911 aaKnown RBP6.71□□□□□ -1.34
PDPN-203ENST00000376061 NDUFC2O95298 119 aa6.7□□□□□ -1.34
PDPN-203ENST00000376061 IGLV5-52A0A0A0MRZ9 124 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 VPREB1P12018 145 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 RAB37Q96AX2 223 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 DNAH11Q96DT5 4516 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 NCR3O14931 201 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 KRTAP10-2P60368 255 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
PDPN-203ENST00000376061 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
PDPN-203ENST00000376061 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 RYR2Q92736 4967 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 RPL13AP40429 203 aaKnown RBP6.68□□□□□ -1.34
PDPN-203ENST00000376061 LINC00336Q6ZUF6 198 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
PDPN-203ENST00000376061 TSPAN13O95857 204 aa6.67□□□□□ -1.34
PDPN-203ENST00000376061 KRTAP7-1Q8IUC3 87 aa6.67□□□□□ -1.34
PDPN-203ENST00000376061 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
PDPN-203ENST00000376061 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
PDPN-203ENST00000376061 PKD1P98161 4303 aa6.66□□□□□ -1.34
PDPN-203ENST00000376061 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
PDPN-203ENST00000376061 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
PDPN-203ENST00000376061 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
PDPN-203ENST00000376061 C9orf118A6NHY6 69 aa6.65□□□□□ -1.35
PDPN-203ENST00000376061 H7C2G1 150 aa6.65□□□□□ -1.35
PDPN-203ENST00000376061 PANO1I0J062 215 aa6.65□□□□□ -1.35
PDPN-203ENST00000376061 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.35
PDPN-203ENST00000376061 NAA38Q9BRA0 125 aaKnown RBP6.65□□□□□ -1.35
PDPN-203ENST00000376061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.35
PDPN-203ENST00000376061 Q1RN00 199 aa6.64□□□□□ -1.35
PDPN-203ENST00000376061 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
PDPN-203ENST00000376061 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
PDPN-203ENST00000376061 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
PDPN-203ENST00000376061 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
PDPN-203ENST00000376061 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
PDPN-203ENST00000376061 M0R378 163 aa6.63□□□□□ -1.35
PDPN-203ENST00000376061 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
PDPN-203ENST00000376061 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms