RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
PTPDC1-202ENST00000375360 LINC00337Q8N6G1 96 aa12.42□□□□□ -0.42
PTPDC1-202ENST00000375360 ATOX1O00244 68 aa12.42□□□□□ -0.42
PTPDC1-202ENST00000375360 A0A087WYN8 130 aa12.41□□□□□ -0.42
PTPDC1-202ENST00000375360 RPL28P46779 137 aaKnown RBP12.41□□□□□ -0.42
PTPDC1-202ENST00000375360 ENHOQ6UWT2 76 aa12.41□□□□□ -0.42
PTPDC1-202ENST00000375360 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
PTPDC1-202ENST00000375360 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
PTPDC1-202ENST00000375360 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
PTPDC1-202ENST00000375360 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
PTPDC1-202ENST00000375360 PLAC8L1A1L4L8 177 aa12.38□□□□□ -0.43
PTPDC1-202ENST00000375360 CSNK1G2-AS1Q8NCQ2 148 aa12.38□□□□□ -0.43
PTPDC1-202ENST00000375360 DHRS4-AS1Q9P1J3 65 aa12.38□□□□□ -0.43
PTPDC1-202ENST00000375360 HRCT1Q6UXD1 115 aa12.38□□□□□ -0.43
PTPDC1-202ENST00000375360 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
PTPDC1-202ENST00000375360 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
PTPDC1-202ENST00000375360 C10orf25Q5T742 122 aa12.36□□□□□ -0.43
PTPDC1-202ENST00000375360 Q8N814 137 aa12.36□□□□□ -0.43
PTPDC1-202ENST00000375360 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
PTPDC1-202ENST00000375360 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
PTPDC1-202ENST00000375360 NDUFV3P56181 108 aaKnown RBP12.35□□□□□ -0.43
PTPDC1-202ENST00000375360 USP34Q70CQ2 3546 aa12.35□□□□□ -0.43
PTPDC1-202ENST00000375360 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
PTPDC1-202ENST00000375360 SS18L2Q9UHA2 77 aa12.34□□□□□ -0.43
PTPDC1-202ENST00000375360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.34□□□□□ -0.43
PTPDC1-202ENST00000375360 C2orf48Q96LS8 159 aa12.33□□□□□ -0.44
PTPDC1-202ENST00000375360 XGP55808 180 aa12.33□□□□□ -0.44
PTPDC1-202ENST00000375360 MDFIQ99750 246 aa12.33□□□□□ -0.44
PTPDC1-202ENST00000375360 KRTAP10-11P60412 298 aa12.32□□□□□ -0.44
PTPDC1-202ENST00000375360 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
PTPDC1-202ENST00000375360 MP68P56378 58 aa12.32□□□□□ -0.44
PTPDC1-202ENST00000375360 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
PTPDC1-202ENST00000375360 IGLV5-45A0A087WSX0 123 aa12.31□□□□□ -0.44
PTPDC1-202ENST00000375360 LINC00474Q9P2X8 69 aa12.31□□□□□ -0.44
PTPDC1-202ENST00000375360 UTP20O75691 2785 aaKnown RBP12.3□□□□□ -0.44
PTPDC1-202ENST00000375360 ZANQ9Y493 2812 aa12.3□□□□□ -0.44
PTPDC1-202ENST00000375360 IGLV5-52A0A0A0MRZ9 124 aa12.3□□□□□ -0.44
PTPDC1-202ENST00000375360 NDUFC2O95298 119 aa12.29□□□□□ -0.44
PTPDC1-202ENST00000375360 C20orf197Q8N268 126 aa12.29□□□□□ -0.44
PTPDC1-202ENST00000375360 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
PTPDC1-202ENST00000375360 C6orf48Q9UBA6 75 aa12.29□□□□□ -0.44
PTPDC1-202ENST00000375360 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
PTPDC1-202ENST00000375360 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
PTPDC1-202ENST00000375360 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
PTPDC1-202ENST00000375360 REG3GQ6UW15 175 aa12.27□□□□□ -0.44
PTPDC1-202ENST00000375360 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.44
PTPDC1-202ENST00000375360 LINC00588Q9Y4M8 146 aa12.27□□□□□ -0.45
PTPDC1-202ENST00000375360 PRLHP81277 87 aa12.25□□□□□ -0.45
PTPDC1-202ENST00000375360 CR1P17927 2039 aa12.25□□□□□ -0.45
PTPDC1-202ENST00000375360 K7EIL1 84 aa12.25□□□□□ -0.45
PTPDC1-202ENST00000375360 H3BNG1 76 aa12.24□□□□□ -0.45
PTPDC1-202ENST00000375360 WFDC13Q8IUB5 93 aa12.24□□□□□ -0.45
PTPDC1-202ENST00000375360 C22orf24Q9Y442 160 aa12.23□□□□□ -0.45
PTPDC1-202ENST00000375360 C1orf137Q5JT78 98 aa12.22□□□□□ -0.45
PTPDC1-202ENST00000375360 LINC00575Q6W349 94 aa12.21□□□□□ -0.45
PTPDC1-202ENST00000375360 IGKV4-1P06312 121 aa12.21□□□□□ -0.46
PTPDC1-202ENST00000375360 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
PTPDC1-202ENST00000375360 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
PTPDC1-202ENST00000375360 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
PTPDC1-202ENST00000375360 A0A087WVE0 104 aa12.18□□□□□ -0.46
PTPDC1-202ENST00000375360 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
PTPDC1-202ENST00000375360 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
PTPDC1-202ENST00000375360 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
PTPDC1-202ENST00000375360 LINC00167Q96N53 147 aa12.16□□□□□ -0.46
PTPDC1-202ENST00000375360 FAM218AQ96MZ4 157 aa12.16□□□□□ -0.46
PTPDC1-202ENST00000375360 F8WDY8 70 aa12.14□□□□□ -0.47
PTPDC1-202ENST00000375360 CELSR2Q9HCU4 2923 aa12.14□□□□□ -0.47
PTPDC1-202ENST00000375360 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
PTPDC1-202ENST00000375360 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
PTPDC1-202ENST00000375360 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
PTPDC1-202ENST00000375360 DEFB116Q30KQ4 102 aa12.12□□□□□ -0.47
PTPDC1-202ENST00000375360 Q9BRP9 147 aa12.12□□□□□ -0.47
PTPDC1-202ENST00000375360 LITAFQ99732 161 aa12.12□□□□□ -0.47
PTPDC1-202ENST00000375360 UQCRQO14949 82 aa12.11□□□□□ -0.47
PTPDC1-202ENST00000375360 PRYO14603 147 aa12.11□□□□□ -0.47
PTPDC1-202ENST00000375360 A0A087WSZ3 146 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 CRYBG3Q68DQ2 2970 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 APCP25054 2843 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 FAM240AA0A1B0GVK7 77 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 SMCR5Q8TEV8 140 aa12.1□□□□□ -0.47
PTPDC1-202ENST00000375360 CHTF8P0CG12 524 aa12.09□□□□□ -0.47
PTPDC1-202ENST00000375360 C3orf22Q8N5N4 141 aa12.09□□□□□ -0.47
PTPDC1-202ENST00000375360 SNURFQ9Y675 71 aa12.09□□□□□ -0.47
PTPDC1-202ENST00000375360 IMUPQ9GZP8 106 aa12.09□□□□□ -0.47
PTPDC1-202ENST00000375360 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
PTPDC1-202ENST00000375360 Q6ZRP5 223 aa12.07□□□□□ -0.48
PTPDC1-202ENST00000375360 Q6JHZ5 121 aa12.06□□□□□ -0.48
PTPDC1-202ENST00000375360 CHKB-CPT1BH3BT56 60 aa12.06□□□□□ -0.48
PTPDC1-202ENST00000375360 TMEM258P61165 79 aa12.06□□□□□ -0.48
PTPDC1-202ENST00000375360 KIAA0087Q14695 138 aa12.05□□□□□ -0.48
PTPDC1-202ENST00000375360 PRR4Q16378 134 aa12.05□□□□□ -0.48
PTPDC1-202ENST00000375360 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
PTPDC1-202ENST00000375360 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
PTPDC1-202ENST00000375360 NF1P21359 2839 aa12.04□□□□□ -0.48
PTPDC1-202ENST00000375360 C5orf47Q569G3 176 aa12.04□□□□□ -0.48
PTPDC1-202ENST00000375360 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
PTPDC1-202ENST00000375360 SERP2Q8N6R1 65 aa12.04□□□□□ -0.48
PTPDC1-202ENST00000375360 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms