RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 RAB5BP61020 215 aa2.73□□□□□ -1.97
PMS1-202ENST00000374826 CNBPP62633 177 aaKnown RBP2.73□□□□□ -1.97
PMS1-202ENST00000374826 FAM19A2Q8N3H0 131 aa2.73□□□□□ -1.97
PMS1-202ENST00000374826 C9orf163Q8N9P6 203 aa2.73□□□□□ -1.97
PMS1-202ENST00000374826 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
PMS1-202ENST00000374826 IGHV3-64A0A075B6Q5 118 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 IGKV2-24A0A0C4DH68 120 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 LINC01549A6NIU2 74 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 PANO1I0J062 215 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 APOMO95445 188 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
PMS1-202ENST00000374826 HERVK_113P63121 156 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 PMVKQ15126 192 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 PDZD11Q5EBL8 140 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 Q6ZRU5 148 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 Q6ZSA8 131 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 SCXQ7RTU7 201 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 CEND1Q8N111 149 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 LINC00469Q8N7U9 141 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 OR10D4PQ8NGN7 298 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 CHCHD1Q96BP2 118 aaKnown RBP2.72□□□□□ -1.97
PMS1-202ENST00000374826 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 CST9LQ9H4G1 147 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
PMS1-202ENST00000374826 TOMM7Q9P0U1 55 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 CDKN2A-AS1Q9UH64 79 aa2.72□□□□□ -1.97
PMS1-202ENST00000374826 A0A096LNI7 61 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 TINCRA0A1B0GVN0 87 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 H0Y8G0 127 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 NDUFA1O15239 70 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 NUPR1O60356 82 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BKO60814 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 ATP5LO75964 103 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BJP06899 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 SPINK8P0C7L1 97 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 S100A1P23297 94 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BOP23527 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BBP33778 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BDP58876 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BCP62807 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST2H2BEQ16778 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.71□□□□□ -1.98
PMS1-202ENST00000374826 C2orf82Q6UX34 121 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 FAM19A3Q7Z5A8 133 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 LINC00518Q8N0U6 118 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BHQ93079 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 IFI27L1Q96BM0 104 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 PACRGQ96M98 296 aaPredicted RBP2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BNQ99877 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 HIST1H2BMQ99879 126 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 CHTOPQ9Y3Y2 248 aaKnown RBP2.71□□□□□ -1.98
PMS1-202ENST00000374826 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 VPS13BQ7Z7G8 4022 aa2.71□□□□□ -1.98
PMS1-202ENST00000374826 C11orf86A6NJI1 115 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 FABP4P15090 132 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 ZNF22P17026 224 aaPredicted RBP2.7□□□□□ -1.98
PMS1-202ENST00000374826 SEC11AP67812 179 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 RPL18AQ02543 176 aaKnown RBP2.7□□□□□ -1.98
PMS1-202ENST00000374826 KIAA0087Q14695 138 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 Q5VSD8 79 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 UNQ6190/PRO20217Q6UXQ8 127 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 C6orf48Q9UBA6 75 aa2.7□□□□□ -1.98
PMS1-202ENST00000374826 FAT1Q14517 4588 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 ABCA13Q86UQ4 5058 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 IGLV8-61A0A075B6I0 122 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 LOC107984640A0A0U1RRK4 108 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 H3BRM9 83 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 LEPROTL1O95214 131 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 CKS1BP61024 79 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 CIRBPQ14011 172 aaKnown RBP2.69□□□□□ -1.98
PMS1-202ENST00000374826 C9orf116Q5BN46 136 aaPredicted RBP2.69□□□□□ -1.98
PMS1-202ENST00000374826 TMEM170BQ5T4T1 132 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 Q8IZM0 81 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 LINC01561Q8N1V8 128 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 COX7B2Q8TF08 81 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 DPH3Q96FX2 82 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 PMCHL2Q9BQD1 86 aa2.69□□□□□ -1.98
PMS1-202ENST00000374826 MRPL35Q9NZE8 188 aaKnown RBP2.69□□□□□ -1.98
PMS1-202ENST00000374826 MUC2Q02817 5179 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 TRBV30A0A0K0K1B3 111 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 F8VRH5 84 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 HNRNPA3P51991 378 aaKnown RBP2.68□□□□□ -1.98
PMS1-202ENST00000374826 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 HSPB8Q9UJY1 196 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 PKIGQ9Y2B9 76 aa2.68□□□□□ -1.98
PMS1-202ENST00000374826 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
PMS1-202ENST00000374826 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
PMS1-202ENST00000374826 NDUFC2-KCTD14E9PQ53 114 aa2.67□□□□□ -1.98
PMS1-202ENST00000374826 F8WDY8 70 aa2.67□□□□□ -1.98
PMS1-202ENST00000374826 ZNF861PO60384 105 aa2.67□□□□□ -1.98
PMS1-202ENST00000374826 CXCL5P42830 114 aa2.67□□□□□ -1.98
PMS1-202ENST00000374826 FAM19A5Q7Z5A7 132 aaPredicted RBP2.67□□□□□ -1.98
PMS1-202ENST00000374826 MAP1LC3CQ9BXW4 147 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms