RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 COX7B2Q8TF08 81 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 CARD19Q96LW7 228 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 PRO0255Q9UI72 69 aa3.27□□□□□ -1.89
USP48-202ENST00000374730 FN1P02751 2386 aaKnown RBP3.27□□□□□ -1.89
USP48-202ENST00000374730 ANK2Q01484 3957 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 DNAH1Q9P2D7 4330 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 APOC4P55056 127 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 NPC2P61916 151 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 SOSTDC1Q6X4U4 206 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 DAND5Q8N907 189 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 CHCHD5Q9BSY4 110 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
USP48-202ENST00000374730 IGLV7-46A0A075B6I9 117 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 IBA57-AS1B1ANH7 110 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 TMEM262E9PQX1 116 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 COX7A2LO14548 114 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 DEFB130BP0DP73 79 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 DEFB130AP0DP74 79 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
USP48-202ENST00000374730 TRAV13-2A0A0B4J235 113 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 TRACP01848 142 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 MIFP14174 115 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 SS18Q15532 418 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 DEFB121Q5J5C9 76 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 C2orf82Q6UX34 121 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 Q8NAQ8 132 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 WFDC9Q8NEX5 89 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 UBE2WQ96B02 151 aa3.24□□□□□ -1.89
USP48-202ENST00000374730 DYNC2H1Q8NCM8 4307 aaKnown RBP3.23□□□□□ -1.89
USP48-202ENST00000374730 CRPP02741 224 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 ATP5G1P05496 136 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 RPL28P46779 137 aaKnown RBP3.23□□□□□ -1.89
USP48-202ENST00000374730 DEFB135Q30KP9 77 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 Q8IZM0 81 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 TOMM7Q9P0U1 55 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
USP48-202ENST00000374730 STAB1Q9NY15 2570 aa3.23□□□□□ -1.89
USP48-202ENST00000374730 IGKV3OR2-268A0A0C4DH90 116 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 FAM240AA0A1B0GVK7 77 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 CXCL5P42830 114 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 CCL18P55774 89 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 DAD1P61803 113 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 C5orf38Q86SI9 138 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
USP48-202ENST00000374730 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 TRAV8-4A0A0B4J246 113 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 SPART-AS1P0CW21 52 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 XCL1P47992 114 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 LINC00158P58513 81 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 MRPL23Q16540 153 aaKnown RBP3.21□□□□□ -1.9
USP48-202ENST00000374730 LELP1Q5T871 98 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 LINC00337Q8N6G1 96 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 MUC7Q8TAX7 377 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 CELA1Q9UNI1 258 aa3.21□□□□□ -1.9
USP48-202ENST00000374730 A0A096LPF7 62 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 H0YGX0 51 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 NDUFC2O95298 119 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 REG3AQ06141 175 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 COX17Q14061 63 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 Q6Q795 121 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 LINC00269Q8N2A0 174 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 CHCHD10Q8WYQ3 142 aaPredicted RBP3.2□□□□□ -1.9
USP48-202ENST00000374730 DNAH9Q9NYC9 4486 aa3.2□□□□□ -1.9
USP48-202ENST00000374730 PKD1L1Q8TDX9 2849 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 A0A1B0GV72 72 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 H3BNG1 76 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 DEFB4AO15263 64 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 ANGP03950 147 aaKnown RBP3.19□□□□□ -1.9
USP48-202ENST00000374730 ACYP1P07311 99 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 PFN2P35080 140 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 CKS1BP61024 79 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 CLPSL2Q6UWE3 100 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 SMIM11BQ8TCY0 68 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 PRR34Q9NV39 138 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 KLK5Q9Y337 293 aaPredicted RBP3.19□□□□□ -1.9
USP48-202ENST00000374730 COL6A5A8TX70 2615 aa3.19□□□□□ -1.9
USP48-202ENST00000374730 A0A1B0GX51 115 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 SNCGO76070 127 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 DNAL4O96015 105 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 BAALC-AS2P0C853 105 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 INAFM2P0DMQ5 153 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 EGFEM1PQ0D2K5 195 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 C11orf68Q9H3H3 251 aaKnown RBP3.18□□□□□ -1.9
USP48-202ENST00000374730 C22orf24Q9Y442 160 aa3.18□□□□□ -1.9
USP48-202ENST00000374730 GVQW2A0A096LPI5 108 aaPredicted RBP3.17□□□□□ -1.9
USP48-202ENST00000374730 HTN3P15516 51 aa3.17□□□□□ -1.9
USP48-202ENST00000374730 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
USP48-202ENST00000374730 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
USP48-202ENST00000374730 LYPD5Q6UWN5 251 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms