RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 A0A096LNJ9 63 aa10.82□□□□□ -0.68
GTF3C4-201ENST00000372146 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
GTF3C4-201ENST00000372146 LCA10Q71F78 164 aa10.82□□□□□ -0.68
GTF3C4-201ENST00000372146 MIR22HGQ0VDD5 57 aa10.82□□□□□ -0.68
GTF3C4-201ENST00000372146 LMO4P61968 165 aa10.82□□□□□ -0.68
GTF3C4-201ENST00000372146 Q6ZQT0 140 aa10.81□□□□□ -0.68
GTF3C4-201ENST00000372146 MOBPQ13875 183 aa10.8□□□□□ -0.68
GTF3C4-201ENST00000372146 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
GTF3C4-201ENST00000372146 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 LINC00313P59037 77 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 ERC2-IT1O76042 136 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 LINC01006Q8NI28 216 aa10.78□□□□□ -0.68
GTF3C4-201ENST00000372146 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 BPTFQ12830 3046 aa10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 LINC01554Q52M75 96 aa10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 ABCA12Q86UK0 2595 aa10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 A0A1B0GUV1 79 aa10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 NHLRC4P0CG21 123 aaPredicted RBP10.77□□□□□ -0.69
GTF3C4-201ENST00000372146 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
GTF3C4-201ENST00000372146 Q6ZSN1 163 aa10.76□□□□□ -0.69
GTF3C4-201ENST00000372146 H3BS24 57 aa10.76□□□□□ -0.69
GTF3C4-201ENST00000372146 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
GTF3C4-201ENST00000372146 LOC101927531A0A1B0GV80 90 aa10.75□□□□□ -0.69
GTF3C4-201ENST00000372146 USP9XQ93008 2570 aaPredicted RBP10.75□□□□□ -0.69
GTF3C4-201ENST00000372146 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
GTF3C4-201ENST00000372146 LUZP6Q538Z0 58 aa10.75□□□□□ -0.69
GTF3C4-201ENST00000372146 C19orf84I3L1E1 186 aa10.75□□□□□ -0.69
GTF3C4-201ENST00000372146 PRR15Q8IV56 129 aa10.74□□□□□ -0.69
GTF3C4-201ENST00000372146 Q8N2B8 174 aa10.74□□□□□ -0.69
GTF3C4-201ENST00000372146 Q6ZRU5 148 aa10.73□□□□□ -0.69
GTF3C4-201ENST00000372146 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
GTF3C4-201ENST00000372146 USP24Q9UPU5 2620 aa10.72□□□□□ -0.69
GTF3C4-201ENST00000372146 A0A1B0GW54 56 aa10.72□□□□□ -0.69
GTF3C4-201ENST00000372146 A0A1W2PNU3 283 aaPredicted RBP10.72□□□□□ -0.69
GTF3C4-201ENST00000372146 IGLV1-40P01703 118 aa10.71□□□□□ -0.7
GTF3C4-201ENST00000372146 LINC01546A6NGU7 62 aa10.69□□□□□ -0.7
GTF3C4-201ENST00000372146 FBXL19-AS1Q494R0 122 aa10.69□□□□□ -0.7
GTF3C4-201ENST00000372146 LINC00476Q8WZB0 136 aa10.68□□□□□ -0.7
GTF3C4-201ENST00000372146 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
GTF3C4-201ENST00000372146 C9orf129Q5T035 196 aaKnown RBP10.68□□□□□ -0.7
GTF3C4-201ENST00000372146 PRRC2CQ9Y520 2896 aaKnown RBP10.67□□□□□ -0.7
GTF3C4-201ENST00000372146 ELOF1P60002 83 aaKnown RBP10.67□□□□□ -0.7
GTF3C4-201ENST00000372146 WISP2O76076 250 aa10.67□□□□□ -0.7
GTF3C4-201ENST00000372146 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
GTF3C4-201ENST00000372146 C1orf134Q5TEV5 83 aa10.65□□□□□ -0.7
GTF3C4-201ENST00000372146 TRBV7-4A0A0J9YYF1 115 aa10.65□□□□□ -0.71
GTF3C4-201ENST00000372146 Q8NBF4 154 aa10.64□□□□□ -0.71
GTF3C4-201ENST00000372146 IGLV5-39A0A0G2JS06 123 aa10.64□□□□□ -0.71
GTF3C4-201ENST00000372146 K7EQZ3 153 aa10.64□□□□□ -0.71
GTF3C4-201ENST00000372146 BRI3O95415 125 aa10.63□□□□□ -0.71
GTF3C4-201ENST00000372146 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
GTF3C4-201ENST00000372146 CDC42SE1Q9NRR8 79 aa10.63□□□□□ -0.71
GTF3C4-201ENST00000372146 LYPD5Q6UWN5 251 aa10.63□□□□□ -0.71
GTF3C4-201ENST00000372146 Q96NJ1 140 aa10.62□□□□□ -0.71
GTF3C4-201ENST00000372146 Q8NA96 180 aa10.61□□□□□ -0.71
GTF3C4-201ENST00000372146 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
GTF3C4-201ENST00000372146 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
GTF3C4-201ENST00000372146 A8MWP4 228 aa10.6□□□□□ -0.71
GTF3C4-201ENST00000372146 CENPFP49454 3210 aa10.59□□□□□ -0.71
GTF3C4-201ENST00000372146 Q6ZRX8 168 aa10.59□□□□□ -0.71
GTF3C4-201ENST00000372146 FASNP49327 2511 aaKnown RBP10.59□□□□□ -0.71
GTF3C4-201ENST00000372146 LINC00167Q96N53 147 aa10.59□□□□□ -0.71
GTF3C4-201ENST00000372146 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
GTF3C4-201ENST00000372146 KLKP1Q107X0 134 aa10.58□□□□□ -0.72
GTF3C4-201ENST00000372146 EPG5Q9HCE0 2579 aa10.58□□□□□ -0.72
GTF3C4-201ENST00000372146 JMJD1CQ15652 2540 aa10.58□□□□□ -0.72
GTF3C4-201ENST00000372146 C11orf71Q6IPW1 123 aa10.57□□□□□ -0.72
GTF3C4-201ENST00000372146 FHL3Q13643 280 aa10.56□□□□□ -0.72
GTF3C4-201ENST00000372146 LY6G6DO95868 133 aa10.54□□□□□ -0.72
GTF3C4-201ENST00000372146 H7BZZ5 65 aa10.54□□□□□ -0.72
GTF3C4-201ENST00000372146 IGLV6-57P01721 117 aa10.53□□□□□ -0.72
GTF3C4-201ENST00000372146 RBM12B-AS1Q9P1G2 102 aa10.52□□□□□ -0.72
GTF3C4-201ENST00000372146 A0A0D9SG42 100 aa10.52□□□□□ -0.72
GTF3C4-201ENST00000372146 IGHV3OR16-9A0A0B4J2B5 98 aa10.52□□□□□ -0.73
GTF3C4-201ENST00000372146 ST20-AS1Q8NBB2 130 aa10.52□□□□□ -0.73
GTF3C4-201ENST00000372146 WIPF1O43516 503 aa10.51□□□□□ -0.73
GTF3C4-201ENST00000372146 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
GTF3C4-201ENST00000372146 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
GTF3C4-201ENST00000372146 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
GTF3C4-201ENST00000372146 PRO3102Q9H379 93 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 UTRNP46939 3433 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 CHD8Q9HCK8 2581 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 TYMSOSQ8TAI1 123 aa10.47□□□□□ -0.73
GTF3C4-201ENST00000372146 DNAH12Q6ZR08 3092 aa10.46□□□□□ -0.73
GTF3C4-201ENST00000372146 PHF5AQ7RTV0 110 aaKnown RBP10.46□□□□□ -0.73
GTF3C4-201ENST00000372146 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
GTF3C4-201ENST00000372146 IGF2RP11717 2491 aa10.44□□□□□ -0.74
GTF3C4-201ENST00000372146 DMBT1Q9UGM3 2413 aaPredicted RBP10.43□□□□□ -0.74
GTF3C4-201ENST00000372146 KIF25-AS1Q9Y6Z4 181 aa10.42□□□□□ -0.74
GTF3C4-201ENST00000372146 Q1T7F1 81 aa10.41□□□□□ -0.74
GTF3C4-201ENST00000372146 CDSNQ15517 529 aa10.4□□□□□ -0.74
GTF3C4-201ENST00000372146 A0A0A0MQY5 61 aa10.37□□□□□ -0.75
GTF3C4-201ENST00000372146 FAM168BA1KXE4 195 aa10.37□□□□□ -0.75
GTF3C4-201ENST00000372146 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
GTF3C4-201ENST00000372146 DSCR10P59022 87 aa10.37□□□□□ -0.75
GTF3C4-201ENST00000372146 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms