RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 A0A096LNI7 61 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 REG3AQ06141 175 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 PLA2G2AP14555 144 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
PTPN1-201ENST00000371621 LINC01006Q8NI28 216 aa8.28□□□□□ -1.08
PTPN1-201ENST00000371621 WFDC10AQ9H1F0 79 aa8.28□□□□□ -1.08
PTPN1-201ENST00000371621 ADORA2A-AS1P86434 159 aa8.28□□□□□ -1.08
PTPN1-201ENST00000371621 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
PTPN1-201ENST00000371621 UBE2AP49459 152 aa8.27□□□□□ -1.08
PTPN1-201ENST00000371621 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.08
PTPN1-201ENST00000371621 ZNF73O43830 326 aaPredicted RBP8.27□□□□□ -1.09
PTPN1-201ENST00000371621 LYPD5Q6UWN5 251 aa8.27□□□□□ -1.09
PTPN1-201ENST00000371621 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
PTPN1-201ENST00000371621 BBC3Q96PG8 261 aaPredicted RBP8.27□□□□□ -1.09
PTPN1-201ENST00000371621 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
PTPN1-201ENST00000371621 CR1P17927 2039 aa8.26□□□□□ -1.09
PTPN1-201ENST00000371621 Q6ZQT0 140 aa8.26□□□□□ -1.09
PTPN1-201ENST00000371621 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 M0R2N4 97 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
PTPN1-201ENST00000371621 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 K7ENP7 123 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 CXCL6P80162 114 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 TMEM89A2RUT3 159 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 CCL24O00175 119 aa8.25□□□□□ -1.09
PTPN1-201ENST00000371621 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
PTPN1-201ENST00000371621 H0Y9J4 135 aa8.24□□□□□ -1.09
PTPN1-201ENST00000371621 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
PTPN1-201ENST00000371621 H3BQ85 93 aa8.24□□□□□ -1.09
PTPN1-201ENST00000371621 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
PTPN1-201ENST00000371621 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
PTPN1-201ENST00000371621 Q8IZM0 81 aa8.23□□□□□ -1.09
PTPN1-201ENST00000371621 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
PTPN1-201ENST00000371621 CD164Q04900 197 aa8.21□□□□□ -1.09
PTPN1-201ENST00000371621 DEFB114Q30KQ6 69 aa8.21□□□□□ -1.09
PTPN1-201ENST00000371621 LINC01600Q96MT4 127 aa8.21□□□□□ -1.09
PTPN1-201ENST00000371621 NDUFB1O75438 58 aa8.21□□□□□ -1.1
PTPN1-201ENST00000371621 PRO0255Q9UI72 69 aa8.21□□□□□ -1.1
PTPN1-201ENST00000371621 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
PTPN1-201ENST00000371621 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
PTPN1-201ENST00000371621 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
PTPN1-201ENST00000371621 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
PTPN1-201ENST00000371621 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
PTPN1-201ENST00000371621 C11orf71Q6IPW1 123 aa8.19□□□□□ -1.1
PTPN1-201ENST00000371621 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
PTPN1-201ENST00000371621 IGKV4-1P06312 121 aa8.18□□□□□ -1.1
PTPN1-201ENST00000371621 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
PTPN1-201ENST00000371621 DEFB135Q30KP9 77 aa8.18□□□□□ -1.1
PTPN1-201ENST00000371621 TRAV22A0A0B4J277 110 aa8.17□□□□□ -1.1
PTPN1-201ENST00000371621 BCE1O60756 84 aa8.17□□□□□ -1.1
PTPN1-201ENST00000371621 DCHS2Q6V1P9 2916 aa8.17□□□□□ -1.1
PTPN1-201ENST00000371621 GCN1Q92616 2671 aaKnown RBP8.17□□□□□ -1.1
PTPN1-201ENST00000371621 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
PTPN1-201ENST00000371621 IGHV4-30-4P0DP06 118 aa8.15□□□□□ -1.1
PTPN1-201ENST00000371621 IGHV4-31P0DP07 118 aa8.15□□□□□ -1.1
PTPN1-201ENST00000371621 B9D2Q9BPU9 175 aa8.15□□□□□ -1.1
PTPN1-201ENST00000371621 A0A1W2PPR1 153 aa8.15□□□□□ -1.1
PTPN1-201ENST00000371621 DSCR9P59020 149 aa8.15□□□□□ -1.1
PTPN1-201ENST00000371621 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.11
PTPN1-201ENST00000371621 C1orf137Q5JT78 98 aa8.15□□□□□ -1.11
PTPN1-201ENST00000371621 AVPP01185 164 aa8.14□□□□□ -1.11
PTPN1-201ENST00000371621 COL27A1Q8IZC6 1860 aaPredicted RBP8.14□□□□□ -1.11
PTPN1-201ENST00000371621 FSHBP01225 129 aa8.14□□□□□ -1.11
PTPN1-201ENST00000371621 COX17Q14061 63 aa8.14□□□□□ -1.11
PTPN1-201ENST00000371621 C22orf24Q9Y442 160 aa8.14□□□□□ -1.11
PTPN1-201ENST00000371621 C10orf25Q5T742 122 aa8.13□□□□□ -1.11
PTPN1-201ENST00000371621 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
PTPN1-201ENST00000371621 CUBNO60494 3623 aa8.12□□□□□ -1.11
PTPN1-201ENST00000371621 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
PTPN1-201ENST00000371621 CELSR1Q9NYQ6 3014 aa8.1□□□□□ -1.11
PTPN1-201ENST00000371621 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
PTPN1-201ENST00000371621 UNC79Q9P2D8 2635 aa8.1□□□□□ -1.11
PTPN1-201ENST00000371621 LOC110117498A0A087WWA1 95 aa8.1□□□□□ -1.11
PTPN1-201ENST00000371621 M0R378 163 aa8.09□□□□□ -1.11
PTPN1-201ENST00000371621 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
PTPN1-201ENST00000371621 MDFIQ99750 246 aa8.09□□□□□ -1.11
PTPN1-201ENST00000371621 APOC4P55056 127 aa8.09□□□□□ -1.11
PTPN1-201ENST00000371621 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
PTPN1-201ENST00000371621 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
PTPN1-201ENST00000371621 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
PTPN1-201ENST00000371621 TRBV7-4A0A0J9YYF1 115 aa8.08□□□□□ -1.12
PTPN1-201ENST00000371621 H0Y9P7 68 aa8.08□□□□□ -1.12
PTPN1-201ENST00000371621 KPRPQ5T749 579 aaPredicted RBP8.08□□□□□ -1.12
PTPN1-201ENST00000371621 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
PTPN1-201ENST00000371621 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
PTPN1-201ENST00000371621 CRYBG3Q68DQ2 2970 aa8.07□□□□□ -1.12
PTPN1-201ENST00000371621 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 A0A087WSZ3 146 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 KIAA0087Q14695 138 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 KTN1-AS1Q86SY8 53 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 C4orf48Q5BLP8 95 aa8.06□□□□□ -1.12
PTPN1-201ENST00000371621 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
PTPN1-201ENST00000371621 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
PTPN1-201ENST00000371621 PSCAO43653 123 aa8.04□□□□□ -1.12
PTPN1-201ENST00000371621 SPART-AS1P0CW21 52 aa8.04□□□□□ -1.12
PTPN1-201ENST00000371621 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
PTPN1-201ENST00000371621 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms