RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CFC1P0CG37 223 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 SPCS1Q9Y6A9 102 aa10.3□□□□□ -0.76
PFDN4-201ENST00000371419 CDK2AP2O75956 126 aa10.29□□□□□ -0.76
PFDN4-201ENST00000371419 C2orf48Q96LS8 159 aa10.29□□□□□ -0.76
PFDN4-201ENST00000371419 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
PFDN4-201ENST00000371419 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
PFDN4-201ENST00000371419 PRO1854Q9UHT4 67 aa10.29□□□□□ -0.76
PFDN4-201ENST00000371419 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
PFDN4-201ENST00000371419 LYRM7Q5U5X0 104 aa10.28□□□□□ -0.76
PFDN4-201ENST00000371419 CARD19Q96LW7 228 aa10.27□□□□□ -0.77
PFDN4-201ENST00000371419 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.77
PFDN4-201ENST00000371419 APOBP04114 4563 aaKnown RBP10.26□□□□□ -0.77
PFDN4-201ENST00000371419 F8WDY8 70 aa10.26□□□□□ -0.77
PFDN4-201ENST00000371419 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
PFDN4-201ENST00000371419 SDIM1Q6ZPB5 146 aa10.26□□□□□ -0.77
PFDN4-201ENST00000371419 Q8IZM0 81 aa10.26□□□□□ -0.77
PFDN4-201ENST00000371419 DNAH8Q96JB1 4490 aa10.25□□□□□ -0.77
PFDN4-201ENST00000371419 Q6ZSA8 131 aa10.25□□□□□ -0.77
PFDN4-201ENST00000371419 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
PFDN4-201ENST00000371419 TSPAN13O95857 204 aa10.24□□□□□ -0.77
PFDN4-201ENST00000371419 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
PFDN4-201ENST00000371419 Q6ZRU5 148 aa10.24□□□□□ -0.77
PFDN4-201ENST00000371419 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
PFDN4-201ENST00000371419 CXCL5P42830 114 aa10.23□□□□□ -0.77
PFDN4-201ENST00000371419 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
PFDN4-201ENST00000371419 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
PFDN4-201ENST00000371419 XGP55808 180 aa10.23□□□□□ -0.77
PFDN4-201ENST00000371419 PKIGQ9Y2B9 76 aa10.23□□□□□ -0.77
PFDN4-201ENST00000371419 DAND5Q8N907 189 aa10.21□□□□□ -0.78
PFDN4-201ENST00000371419 HSPG2P98160 4391 aa10.21□□□□□ -0.78
PFDN4-201ENST00000371419 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
PFDN4-201ENST00000371419 CKS1BP61024 79 aa10.2□□□□□ -0.78
PFDN4-201ENST00000371419 NPC2P61916 151 aa10.2□□□□□ -0.78
PFDN4-201ENST00000371419 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
PFDN4-201ENST00000371419 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
PFDN4-201ENST00000371419 LOC107984156A0A0G2JMH3 177 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 LINC00158P58513 81 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 HAMPP81172 84 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 ARL17AQ8IVW1 177 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 RYR1P21817 5038 aa10.19□□□□□ -0.78
PFDN4-201ENST00000371419 TRBV20-1A0A075B6N2 111 aa10.18□□□□□ -0.78
PFDN4-201ENST00000371419 LCE2BO14633 110 aa10.18□□□□□ -0.78
PFDN4-201ENST00000371419 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
PFDN4-201ENST00000371419 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
PFDN4-201ENST00000371419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
PFDN4-201ENST00000371419 LOC107984640A0A0U1RRK4 108 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 PSMB2P49721 201 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 Q1RN00 199 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 C6orf48Q9UBA6 75 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 PANO1I0J062 215 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 COX17Q14061 63 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
PFDN4-201ENST00000371419 A0A096LNI7 61 aa10.16□□□□□ -0.78
PFDN4-201ENST00000371419 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
PFDN4-201ENST00000371419 CIRBP-AS1Q8TBR5 109 aa10.16□□□□□ -0.78
PFDN4-201ENST00000371419 DPH3Q96FX2 82 aa10.16□□□□□ -0.78
PFDN4-201ENST00000371419 H7C2G1 150 aa10.15□□□□□ -0.78
PFDN4-201ENST00000371419 SPACA4Q8TDM5 124 aa10.15□□□□□ -0.78
PFDN4-201ENST00000371419 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.78
PFDN4-201ENST00000371419 F8W1H4 67 aa10.14□□□□□ -0.79
PFDN4-201ENST00000371419 HERC2O95714 4834 aa10.14□□□□□ -0.79
PFDN4-201ENST00000371419 COX6CP09669 75 aa10.13□□□□□ -0.79
PFDN4-201ENST00000371419 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
PFDN4-201ENST00000371419 PFN2P35080 140 aa10.13□□□□□ -0.79
PFDN4-201ENST00000371419 RPL18AQ02543 176 aaKnown RBP10.13□□□□□ -0.79
PFDN4-201ENST00000371419 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
PFDN4-201ENST00000371419 H3BMG7 143 aa10.12□□□□□ -0.79
PFDN4-201ENST00000371419 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
PFDN4-201ENST00000371419 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
PFDN4-201ENST00000371419 A0A087WYN8 130 aa10.11□□□□□ -0.79
PFDN4-201ENST00000371419 TRAV13-2A0A0B4J235 113 aa10.11□□□□□ -0.79
PFDN4-201ENST00000371419 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
PFDN4-201ENST00000371419 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
PFDN4-201ENST00000371419 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
PFDN4-201ENST00000371419 TCL1BO95988 128 aa10.1□□□□□ -0.79
PFDN4-201ENST00000371419 Q6ZRP5 223 aa10.1□□□□□ -0.79
PFDN4-201ENST00000371419 Q8N1X5 172 aa10.1□□□□□ -0.79
PFDN4-201ENST00000371419 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
PFDN4-201ENST00000371419 TRIAP1O43715 76 aa10.09□□□□□ -0.79
PFDN4-201ENST00000371419 ATXN8Q156A1 80 aa10.08□□□□□ -0.8
PFDN4-201ENST00000371419 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
PFDN4-201ENST00000371419 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
PFDN4-201ENST00000371419 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
PFDN4-201ENST00000371419 FAT1Q14517 4588 aa10.07□□□□□ -0.8
PFDN4-201ENST00000371419 PRO0461Q9UI25 63 aa10.06□□□□□ -0.8
PFDN4-201ENST00000371419 NDUFC2O95298 119 aa10.05□□□□□ -0.8
PFDN4-201ENST00000371419 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
PFDN4-201ENST00000371419 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
PFDN4-201ENST00000371419 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms