RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
RPF1-201ENST00000370654 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
RPF1-201ENST00000370654 C18orf32Q8TCD1 76 aa7.59□□□□□ -1.19
RPF1-201ENST00000370654 C10orf91Q5T1B1 145 aa7.59□□□□□ -1.2
RPF1-201ENST00000370654 COMMD7Q86VX2 200 aa7.59□□□□□ -1.2
RPF1-201ENST00000370654 RPS10P5Q9NQ39 176 aa7.59□□□□□ -1.2
RPF1-201ENST00000370654 LINC00614P0C842 121 aa7.58□□□□□ -1.2
RPF1-201ENST00000370654 COX19Q49B96 90 aa7.58□□□□□ -1.2
RPF1-201ENST00000370654 PLEKHB2Q96CS7 222 aa7.58□□□□□ -1.2
RPF1-201ENST00000370654 BAGE3Q86Y29 109 aa7.57□□□□□ -1.2
RPF1-201ENST00000370654 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
RPF1-201ENST00000370654 HBDP02042 147 aa7.56□□□□□ -1.2
RPF1-201ENST00000370654 TRAPPC1Q9Y5R8 145 aa7.56□□□□□ -1.2
RPF1-201ENST00000370654 A0A0U1RRA0 63 aa7.55□□□□□ -1.2
RPF1-201ENST00000370654 TMEM170BQ5T4T1 132 aa7.55□□□□□ -1.2
RPF1-201ENST00000370654 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
RPF1-201ENST00000370654 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
RPF1-201ENST00000370654 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
RPF1-201ENST00000370654 COX17Q14061 63 aa7.54□□□□□ -1.2
RPF1-201ENST00000370654 RHEBQ15382 184 aa7.54□□□□□ -1.2
RPF1-201ENST00000370654 CBLN2Q8IUK8 224 aa7.54□□□□□ -1.2
RPF1-201ENST00000370654 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
RPF1-201ENST00000370654 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
RPF1-201ENST00000370654 LINC00158P58513 81 aa7.52□□□□□ -1.21
RPF1-201ENST00000370654 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
RPF1-201ENST00000370654 A0A0U1RQV1 116 aa7.51□□□□□ -1.21
RPF1-201ENST00000370654 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
RPF1-201ENST00000370654 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
RPF1-201ENST00000370654 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
RPF1-201ENST00000370654 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
RPF1-201ENST00000370654 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
RPF1-201ENST00000370654 DAND5Q8N907 189 aa7.49□□□□□ -1.21
RPF1-201ENST00000370654 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
RPF1-201ENST00000370654 NCR3O14931 201 aa7.48□□□□□ -1.21
RPF1-201ENST00000370654 YPEL4Q96NS1 127 aa7.47□□□□□ -1.21
RPF1-201ENST00000370654 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.21
RPF1-201ENST00000370654 APOC3P02656 99 aa7.46□□□□□ -1.21
RPF1-201ENST00000370654 SPRR1AP35321 89 aa7.46□□□□□ -1.21
RPF1-201ENST00000370654 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.21
RPF1-201ENST00000370654 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.21
RPF1-201ENST00000370654 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
RPF1-201ENST00000370654 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
RPF1-201ENST00000370654 Q8NBF4 154 aa7.46□□□□□ -1.22
RPF1-201ENST00000370654 SMCR5Q8TEV8 140 aa7.46□□□□□ -1.22
RPF1-201ENST00000370654 IFI27L1Q96BM0 104 aa7.46□□□□□ -1.22
RPF1-201ENST00000370654 CTAG1AP78358 180 aa7.45□□□□□ -1.22
RPF1-201ENST00000370654 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
RPF1-201ENST00000370654 TRBV10-3A0A0K0K1G6 114 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 PRYO14603 147 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 SVIPQ8NHG7 77 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
RPF1-201ENST00000370654 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
RPF1-201ENST00000370654 ERC2-IT1O76042 136 aa7.43□□□□□ -1.22
RPF1-201ENST00000370654 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
RPF1-201ENST00000370654 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
RPF1-201ENST00000370654 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
RPF1-201ENST00000370654 C21orf62-AS1Q17RA5 79 aa7.42□□□□□ -1.22
RPF1-201ENST00000370654 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
RPF1-201ENST00000370654 NDUFA12Q9UI09 145 aa7.41□□□□□ -1.22
RPF1-201ENST00000370654 B5MCH6 92 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 H0Y8G0 127 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 ATP6V1G1O75348 118 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 SNAPINO95295 136 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 LINC00310P59036 64 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
RPF1-201ENST00000370654 ZNF706Q9Y5V0 76 aaPredicted RBP7.4□□□□□ -1.22
RPF1-201ENST00000370654 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
RPF1-201ENST00000370654 HERV-K104P63124 156 aa7.39□□□□□ -1.23
RPF1-201ENST00000370654 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
RPF1-201ENST00000370654 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
RPF1-201ENST00000370654 SVBPQ8N300 66 aa7.39□□□□□ -1.23
RPF1-201ENST00000370654 Q9BRP9 147 aa7.39□□□□□ -1.23
RPF1-201ENST00000370654 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
RPF1-201ENST00000370654 MOBPQ13875 183 aa7.37□□□□□ -1.23
RPF1-201ENST00000370654 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
RPF1-201ENST00000370654 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
RPF1-201ENST00000370654 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
RPF1-201ENST00000370654 HSBP1O75506 76 aa7.36□□□□□ -1.23
RPF1-201ENST00000370654 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 LEPROTO15243 131 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 SPINK1P00995 79 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 ASB16-AS1Q495Z4 193 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 PMCHL2Q9BQD1 86 aa7.35□□□□□ -1.23
RPF1-201ENST00000370654 A6NJY4 79 aa7.34□□□□□ -1.23
RPF1-201ENST00000370654 TRGC2P03986 189 aa7.34□□□□□ -1.23
RPF1-201ENST00000370654 DDTP30046 118 aa7.34□□□□□ -1.23
RPF1-201ENST00000370654 Q8N377 158 aa7.34□□□□□ -1.23
RPF1-201ENST00000370654 SERF1AO75920 110 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 LINC00587B1AMM8 73 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 J3QQQ9 107 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
RPF1-201ENST00000370654 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
RPF1-201ENST00000370654 LEPROTL1O95214 131 aa7.32□□□□□ -1.24
RPF1-201ENST00000370654 NPC2P61916 151 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms