RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 FAM236DA0A1B0GTK5 79 aa6.92□□□□□ -1.3
PRPF38B-203ENST00000370025 FAM236CP0DP71 79 aa6.92□□□□□ -1.3
PRPF38B-203ENST00000370025 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
PRPF38B-203ENST00000370025 MAST4O15021 2626 aa6.91□□□□□ -1.3
PRPF38B-203ENST00000370025 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
PRPF38B-203ENST00000370025 TIMM17BO60830 172 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 HAMPP81172 84 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 Q6JHZ5 121 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 TRRAPQ9Y4A5 3859 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 STAB1Q9NY15 2570 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.3
PRPF38B-203ENST00000370025 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.31
PRPF38B-203ENST00000370025 IGKV2D-28P01615 120 aa6.9□□□□□ -1.31
PRPF38B-203ENST00000370025 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.31
PRPF38B-203ENST00000370025 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 RMI2Q96E14 147 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 FBN1P35555 2871 aaKnown RBP6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 MRAPQ8TCY5 172 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 MGAM2Q2M2H8 2515 aa6.89□□□□□ -1.31
PRPF38B-203ENST00000370025 SCXQ7RTU7 201 aa6.88□□□□□ -1.31
PRPF38B-203ENST00000370025 COPS9Q8WXC6 57 aa6.88□□□□□ -1.31
PRPF38B-203ENST00000370025 ANGP03950 147 aaKnown RBP6.87□□□□□ -1.31
PRPF38B-203ENST00000370025 RETNQ9HD89 108 aa6.87□□□□□ -1.31
PRPF38B-203ENST00000370025 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
PRPF38B-203ENST00000370025 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
PRPF38B-203ENST00000370025 CCL18P55774 89 aa6.86□□□□□ -1.31
PRPF38B-203ENST00000370025 F8WEM9 126 aa6.86□□□□□ -1.31
PRPF38B-203ENST00000370025 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
PRPF38B-203ENST00000370025 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
PRPF38B-203ENST00000370025 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
PRPF38B-203ENST00000370025 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
PRPF38B-203ENST00000370025 SS18Q15532 418 aa6.85□□□□□ -1.31
PRPF38B-203ENST00000370025 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
PRPF38B-203ENST00000370025 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
PRPF38B-203ENST00000370025 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
PRPF38B-203ENST00000370025 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.31
PRPF38B-203ENST00000370025 NDUFC2O95298 119 aa6.84□□□□□ -1.31
PRPF38B-203ENST00000370025 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
PRPF38B-203ENST00000370025 CCKP06307 115 aa6.83□□□□□ -1.32
PRPF38B-203ENST00000370025 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
PRPF38B-203ENST00000370025 H7BZZ5 65 aa6.82□□□□□ -1.32
PRPF38B-203ENST00000370025 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
PRPF38B-203ENST00000370025 H0YGX0 51 aa6.82□□□□□ -1.32
PRPF38B-203ENST00000370025 M0R2N4 97 aa6.82□□□□□ -1.32
PRPF38B-203ENST00000370025 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
PRPF38B-203ENST00000370025 LRCOL1A6NCL2 159 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 LELP1Q5T871 98 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 LYPD5Q6UWN5 251 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 Q8N3U1 123 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 A0A0J9YWU9 116 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
PRPF38B-203ENST00000370025 H3BNG1 76 aa6.8□□□□□ -1.32
PRPF38B-203ENST00000370025 PRB2P02812 416 aaPredicted RBP6.8□□□□□ -1.32
PRPF38B-203ENST00000370025 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
PRPF38B-203ENST00000370025 Q6ZTC4 211 aa6.8□□□□□ -1.32
PRPF38B-203ENST00000370025 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
PRPF38B-203ENST00000370025 C11orf45Q8TAV5 145 aa6.79□□□□□ -1.32
PRPF38B-203ENST00000370025 PKD1L1Q8TDX9 2849 aa6.79□□□□□ -1.32
PRPF38B-203ENST00000370025 A0A087WZ39 114 aa6.79□□□□□ -1.32
PRPF38B-203ENST00000370025 KPRPQ5T749 579 aaPredicted RBP6.79□□□□□ -1.32
PRPF38B-203ENST00000370025 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
PRPF38B-203ENST00000370025 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 K7EIL1 84 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 SEC61GP60059 68 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 NANOS2P60321 138 aaKnown RBP6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 REG3AQ06141 175 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
PRPF38B-203ENST00000370025 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
PRPF38B-203ENST00000370025 Q8N9L7 120 aa6.77□□□□□ -1.33
PRPF38B-203ENST00000370025 KLK12Q9UKR0 248 aa6.77□□□□□ -1.33
PRPF38B-203ENST00000370025 V9GYY9 64 aa6.77□□□□□ -1.33
PRPF38B-203ENST00000370025 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
PRPF38B-203ENST00000370025 MDFIQ99750 246 aa6.76□□□□□ -1.33
PRPF38B-203ENST00000370025 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
PRPF38B-203ENST00000370025 C6orf99Q4VX62 202 aa6.76□□□□□ -1.33
PRPF38B-203ENST00000370025 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 CHCHD10Q8WYQ3 142 aaPredicted RBP6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 OBSCN-AS1Q96MR7 158 aa6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 CMYA5Q8N3K9 4069 aa6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 Q8N814 137 aa6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 LINC01547P58512 204 aaPredicted RBP6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 HIGD2BQ4VC39 106 aa6.75□□□□□ -1.33
PRPF38B-203ENST00000370025 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
PRPF38B-203ENST00000370025 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
PRPF38B-203ENST00000370025 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
PRPF38B-203ENST00000370025 TMEM256-PLSCR3K7ERE1 68 aa6.74□□□□□ -1.33
PRPF38B-203ENST00000370025 DEFB105AQ8NG35 78 aa6.73□□□□□ -1.33
PRPF38B-203ENST00000370025 C6orf223Q8N319 242 aa6.73□□□□□ -1.33
PRPF38B-203ENST00000370025 Q6ZVQ6 151 aa6.72□□□□□ -1.33
PRPF38B-203ENST00000370025 Q8IZM0 81 aa6.72□□□□□ -1.33
PRPF38B-203ENST00000370025 PRR34Q9NV39 138 aa6.72□□□□□ -1.33
PRPF38B-203ENST00000370025 ESRGQ1W209 222 aa6.71□□□□□ -1.33
PRPF38B-203ENST00000370025 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
PRPF38B-203ENST00000370025 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
PRPF38B-203ENST00000370025 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms