RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 DSCR9P59020 149 aa7.23□□□□□ -1.25
PRPF38B-201ENST00000370021 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
PRPF38B-201ENST00000370021 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
PRPF38B-201ENST00000370021 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
PRPF38B-201ENST00000370021 NREPQ16612 68 aa7.22□□□□□ -1.25
PRPF38B-201ENST00000370021 C10orf25Q5T742 122 aa7.22□□□□□ -1.25
PRPF38B-201ENST00000370021 ATRQ13535 2644 aa7.21□□□□□ -1.26
PRPF38B-201ENST00000370021 TRAV7A0A075B6U4 112 aa7.21□□□□□ -1.26
PRPF38B-201ENST00000370021 IGHV4-31P0DP07 118 aa7.21□□□□□ -1.26
PRPF38B-201ENST00000370021 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 J3QLI3 93 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 ATP5EP2Q5VTU8 51 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 CYSRT1A8MQ03 144 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 DIRC1Q969H9 104 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 PRO0255Q9UI72 69 aa7.2□□□□□ -1.26
PRPF38B-201ENST00000370021 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
PRPF38B-201ENST00000370021 Q8IZM0 81 aa7.19□□□□□ -1.26
PRPF38B-201ENST00000370021 SPATA3Q8NHX4 192 aa7.19□□□□□ -1.26
PRPF38B-201ENST00000370021 DNAJC9-AS1A6NH13 148 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 MIFP14174 115 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 CAMK2N2Q96S95 79 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 LINC00575Q6W349 94 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 TRBV7-6A0A0J9YX20 115 aa7.18□□□□□ -1.26
PRPF38B-201ENST00000370021 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 BPY2O14599 106 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 COX7BP24311 80 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 Q5XG85 94 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 FAM30AQ9NZY2 134 aa7.17□□□□□ -1.26
PRPF38B-201ENST00000370021 A0A096LNT2 108 aa7.16□□□□□ -1.26
PRPF38B-201ENST00000370021 H7BZZ5 65 aa7.16□□□□□ -1.26
PRPF38B-201ENST00000370021 FASNP49327 2511 aaKnown RBP7.16□□□□□ -1.26
PRPF38B-201ENST00000370021 Q6ZQT0 140 aa7.15□□□□□ -1.26
PRPF38B-201ENST00000370021 MUC7Q8TAX7 377 aa7.15□□□□□ -1.26
PRPF38B-201ENST00000370021 FUSP35637 526 aaKnown RBP eCLIP7.15□□□□□ -1.27
PRPF38B-201ENST00000370021 TEP1Q99973 2627 aaKnown RBP7.14□□□□□ -1.27
PRPF38B-201ENST00000370021 TMEM254Q8TBM7 123 aa7.14□□□□□ -1.27
PRPF38B-201ENST00000370021 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 CMC4P56277 68 aaPredicted RBP7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 HECTD1Q9ULT8 2610 aa7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
PRPF38B-201ENST00000370021 GIG44P09565 113 aaPredicted RBP7.12□□□□□ -1.27
PRPF38B-201ENST00000370021 Q8NDZ9 215 aa7.12□□□□□ -1.27
PRPF38B-201ENST00000370021 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
PRPF38B-201ENST00000370021 NKAPP1Q8N9T2 125 aa7.12□□□□□ -1.27
PRPF38B-201ENST00000370021 PSPHP1O15172 72 aa7.12□□□□□ -1.27
PRPF38B-201ENST00000370021 HIVEP1P15822 2718 aa7.11□□□□□ -1.27
PRPF38B-201ENST00000370021 OBSCN-AS1Q96MR7 158 aa7.11□□□□□ -1.27
PRPF38B-201ENST00000370021 DEFB113Q30KQ7 82 aa7.11□□□□□ -1.27
PRPF38B-201ENST00000370021 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
PRPF38B-201ENST00000370021 DEFB116Q30KQ4 102 aa7.11□□□□□ -1.27
PRPF38B-201ENST00000370021 PLAC8L1A1L4L8 177 aa7.1□□□□□ -1.27
PRPF38B-201ENST00000370021 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
PRPF38B-201ENST00000370021 HELZ2Q9BYK8 2649 aaKnown RBP7.09□□□□□ -1.27
PRPF38B-201ENST00000370021 FAM19A3Q7Z5A8 133 aa7.09□□□□□ -1.27
PRPF38B-201ENST00000370021 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.27
PRPF38B-201ENST00000370021 PDE6GP18545 87 aa7.09□□□□□ -1.28
PRPF38B-201ENST00000370021 LY6G6DO95868 133 aa7.08□□□□□ -1.28
PRPF38B-201ENST00000370021 COX17Q14061 63 aa7.07□□□□□ -1.28
PRPF38B-201ENST00000370021 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
PRPF38B-201ENST00000370021 V9GYY9 64 aa7.07□□□□□ -1.28
PRPF38B-201ENST00000370021 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
PRPF38B-201ENST00000370021 UBE2BP63146 152 aa7.06□□□□□ -1.28
PRPF38B-201ENST00000370021 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
PRPF38B-201ENST00000370021 PRYO14603 147 aa7.06□□□□□ -1.28
PRPF38B-201ENST00000370021 IGLV1-51P01701 117 aa7.06□□□□□ -1.28
PRPF38B-201ENST00000370021 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
PRPF38B-201ENST00000370021 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
PRPF38B-201ENST00000370021 A0A096LNI7 61 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 A0A0J9YWU9 116 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 SMR3AQ99954 134 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
PRPF38B-201ENST00000370021 NDUFC1O43677 76 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 SPTSSBQ8NFR3 76 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
PRPF38B-201ENST00000370021 CXCL6P80162 114 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 NBEAL1Q6ZS30 2694 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 CSNK1G2-AS1Q8NCQ2 148 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
PRPF38B-201ENST00000370021 ESRGQ1W209 222 aa7.01□□□□□ -1.29
PRPF38B-201ENST00000370021 Q6ZRU5 148 aa7.01□□□□□ -1.29
PRPF38B-201ENST00000370021 LOC110117498A0A087WWA1 95 aa7.01□□□□□ -1.29
PRPF38B-201ENST00000370021 PDZD2O15018 2839 aa7□□□□□ -1.29
PRPF38B-201ENST00000370021 FLNBO75369 2602 aaKnown RBP7□□□□□ -1.29
PRPF38B-201ENST00000370021 WIPF1O43516 503 aa7□□□□□ -1.29
PRPF38B-201ENST00000370021 M0R378 163 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms