RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
PHGDH-202ENST00000369409 GAGE10A6NGK3 116 aa11□□□□□ -0.65
PHGDH-202ENST00000369409 SLPIP03973 132 aa11□□□□□ -0.65
PHGDH-202ENST00000369409 PSMB2P49721 201 aa11□□□□□ -0.65
PHGDH-202ENST00000369409 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
PHGDH-202ENST00000369409 XAGE1AQ9HD64 81 aa10.98□□□□□ -0.65
PHGDH-202ENST00000369409 TRAV13-2A0A0B4J235 113 aa10.98□□□□□ -0.65
PHGDH-202ENST00000369409 GTF2H5Q6ZYL4 71 aa10.98□□□□□ -0.65
PHGDH-202ENST00000369409 Q8NDZ9 215 aa10.98□□□□□ -0.65
PHGDH-202ENST00000369409 TRIAP1O43715 76 aa10.97□□□□□ -0.65
PHGDH-202ENST00000369409 NDUFC2O95298 119 aa10.96□□□□□ -0.65
PHGDH-202ENST00000369409 LYRM7Q5U5X0 104 aa10.96□□□□□ -0.65
PHGDH-202ENST00000369409 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-202ENST00000369409 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
PHGDH-202ENST00000369409 LY6G6CO95867 125 aa10.95□□□□□ -0.66
PHGDH-202ENST00000369409 SCGB1C2P0DMR2 95 aa10.95□□□□□ -0.66
PHGDH-202ENST00000369409 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
PHGDH-202ENST00000369409 Q6ZRP5 223 aa10.95□□□□□ -0.66
PHGDH-202ENST00000369409 GAGE2DQ9UEU5 116 aa10.95□□□□□ -0.66
PHGDH-202ENST00000369409 NCR3O14931 201 aa10.94□□□□□ -0.66
PHGDH-202ENST00000369409 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
PHGDH-202ENST00000369409 RPL18AQ02543 176 aaKnown RBP10.93□□□□□ -0.66
PHGDH-202ENST00000369409 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
PHGDH-202ENST00000369409 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
PHGDH-202ENST00000369409 Q6ZR54 194 aa10.93□□□□□ -0.66
PHGDH-202ENST00000369409 LINC00476Q8WZB0 136 aa10.93□□□□□ -0.66
PHGDH-202ENST00000369409 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
PHGDH-202ENST00000369409 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
PHGDH-202ENST00000369409 LRCOL1A6NCL2 159 aa10.91□□□□□ -0.66
PHGDH-202ENST00000369409 TCL1BO95988 128 aa10.91□□□□□ -0.66
PHGDH-202ENST00000369409 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
PHGDH-202ENST00000369409 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
PHGDH-202ENST00000369409 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-202ENST00000369409 H3BMG7 143 aa10.91□□□□□ -0.66
PHGDH-202ENST00000369409 DNAH6Q9C0G6 4158 aa10.9□□□□□ -0.66
PHGDH-202ENST00000369409 COX6CP09669 75 aa10.89□□□□□ -0.67
PHGDH-202ENST00000369409 CNBPP62633 177 aaKnown RBP10.89□□□□□ -0.67
PHGDH-202ENST00000369409 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
PHGDH-202ENST00000369409 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
PHGDH-202ENST00000369409 TRBV20-1A0A075B6N2 111 aa10.88□□□□□ -0.67
PHGDH-202ENST00000369409 VPREB1P12018 145 aa10.87□□□□□ -0.67
PHGDH-202ENST00000369409 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
PHGDH-202ENST00000369409 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
PHGDH-202ENST00000369409 CLEC2BQ92478 149 aa10.87□□□□□ -0.67
PHGDH-202ENST00000369409 DNAH2Q9P225 4427 aa10.87□□□□□ -0.67
PHGDH-202ENST00000369409 GAGE2BQ13066 116 aa10.86□□□□□ -0.67
PHGDH-202ENST00000369409 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
PHGDH-202ENST00000369409 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
PHGDH-202ENST00000369409 TRBV10-2A0A0K0K1G8 114 aa10.85□□□□□ -0.67
PHGDH-202ENST00000369409 MTURNQ8N3F0 131 aa10.85□□□□□ -0.67
PHGDH-202ENST00000369409 A0A1B0GV72 72 aa10.84□□□□□ -0.67
PHGDH-202ENST00000369409 ATXN8Q156A1 80 aa10.84□□□□□ -0.67
PHGDH-202ENST00000369409 C1orf134Q5TEV5 83 aa10.83□□□□□ -0.68
PHGDH-202ENST00000369409 Q8N814 137 aa10.83□□□□□ -0.68
PHGDH-202ENST00000369409 A0A087WTM6 91 aa10.82□□□□□ -0.68
PHGDH-202ENST00000369409 IGLV6-57P01721 117 aa10.82□□□□□ -0.68
PHGDH-202ENST00000369409 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
PHGDH-202ENST00000369409 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
PHGDH-202ENST00000369409 LST1O00453 97 aa10.81□□□□□ -0.68
PHGDH-202ENST00000369409 A0A096LNI7 61 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 FAM168BA1KXE4 195 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 J3QR89 54 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 M0R378 163 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 NKAPP1Q8N9T2 125 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
PHGDH-202ENST00000369409 FAM218AQ96MZ4 157 aa10.79□□□□□ -0.68
PHGDH-202ENST00000369409 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
PHGDH-202ENST00000369409 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
PHGDH-202ENST00000369409 PLA2G2DQ9UNK4 145 aa10.78□□□□□ -0.68
PHGDH-202ENST00000369409 C9JAW5 83 aa10.78□□□□□ -0.68
PHGDH-202ENST00000369409 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
PHGDH-202ENST00000369409 C16orf90A8MZG2 172 aa10.77□□□□□ -0.69
PHGDH-202ENST00000369409 F8W1H4 67 aa10.77□□□□□ -0.69
PHGDH-202ENST00000369409 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
PHGDH-202ENST00000369409 TRAV23DV6A0A075B6W5 121 aa10.76□□□□□ -0.69
PHGDH-202ENST00000369409 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-202ENST00000369409 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
PHGDH-202ENST00000369409 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
PHGDH-202ENST00000369409 DNAH17Q9UFH2 4485 aa10.75□□□□□ -0.69
PHGDH-202ENST00000369409 H0YGX0 51 aa10.75□□□□□ -0.69
PHGDH-202ENST00000369409 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-202ENST00000369409 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
PHGDH-202ENST00000369409 IGLV5-37A0A075B6J1 123 aa10.74□□□□□ -0.69
PHGDH-202ENST00000369409 A0A087WYN8 130 aa10.74□□□□□ -0.69
PHGDH-202ENST00000369409 SLC25A20O43772 301 aa10.73□□□□□ -0.69
PHGDH-202ENST00000369409 CHTF8P0CG12 524 aa10.73□□□□□ -0.69
PHGDH-202ENST00000369409 FRAS1Q86XX4 4008 aa10.73□□□□□ -0.69
PHGDH-202ENST00000369409 HYDINQ4G0P3 5121 aa10.73□□□□□ -0.69
PHGDH-202ENST00000369409 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHGDH-202ENST00000369409 PKIGQ9Y2B9 76 aa10.72□□□□□ -0.69
PHGDH-202ENST00000369409 TRACP01848 142 aa10.72□□□□□ -0.69
PHGDH-202ENST00000369409 DIRC1Q969H9 104 aa10.72□□□□□ -0.69
PHGDH-202ENST00000369409 ZNF73O43830 326 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-202ENST00000369409 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
PHGDH-202ENST00000369409 RTL8CO15255 209 aa10.7□□□□□ -0.7
PHGDH-202ENST00000369409 TNP2Q05952 138 aa10.7□□□□□ -0.7
PHGDH-202ENST00000369409 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
PHGDH-202ENST00000369409 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
PHGDH-202ENST00000369409 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
PHGDH-202ENST00000369409 A0A1W2PNN7 141 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms