RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TMEM256-PLSCR3K7ERE1 68 aa8.45□□□□□ -1.06
PHGDH-201ENST00000369407 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
PHGDH-201ENST00000369407 FASNP49327 2511 aaKnown RBP8.45□□□□□ -1.06
PHGDH-201ENST00000369407 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
PHGDH-201ENST00000369407 LYPD5Q6UWN5 251 aa8.45□□□□□ -1.06
PHGDH-201ENST00000369407 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
PHGDH-201ENST00000369407 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
PHGDH-201ENST00000369407 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 PRB2P02812 416 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-201ENST00000369407 Q8IZM0 81 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 LINC00167Q96N53 147 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 TRAV10A0A0B4J240 114 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 DEFB4AO15263 64 aa8.43□□□□□ -1.06
PHGDH-201ENST00000369407 DNAJC9-AS1A6NH13 148 aa8.41□□□□□ -1.06
PHGDH-201ENST00000369407 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
PHGDH-201ENST00000369407 C19orf73Q9NVV2 129 aa8.41□□□□□ -1.06
PHGDH-201ENST00000369407 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
PHGDH-201ENST00000369407 DAD1P61803 113 aa8.4□□□□□ -1.06
PHGDH-201ENST00000369407 ZNF843Q8N446 348 aa8.4□□□□□ -1.06
PHGDH-201ENST00000369407 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
PHGDH-201ENST00000369407 ANGP03950 147 aaKnown RBP8.4□□□□□ -1.06
PHGDH-201ENST00000369407 CHCHD10Q8WYQ3 142 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-201ENST00000369407 C16orf95Q9H693 158 aa8.4□□□□□ -1.07
PHGDH-201ENST00000369407 Q6ZQT0 140 aa8.39□□□□□ -1.07
PHGDH-201ENST00000369407 LINC01006Q8NI28 216 aa8.39□□□□□ -1.07
PHGDH-201ENST00000369407 UNQ6190/PRO20217Q6UXQ8 127 aa8.39□□□□□ -1.07
PHGDH-201ENST00000369407 LINC00575Q6W349 94 aa8.39□□□□□ -1.07
PHGDH-201ENST00000369407 LINC01547P58512 204 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-201ENST00000369407 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
PHGDH-201ENST00000369407 Q6ZQY7 126 aa8.38□□□□□ -1.07
PHGDH-201ENST00000369407 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
PHGDH-201ENST00000369407 TENM4Q6N022 2769 aa8.37□□□□□ -1.07
PHGDH-201ENST00000369407 Q6ZVQ6 151 aa8.37□□□□□ -1.07
PHGDH-201ENST00000369407 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-201ENST00000369407 RETNQ9HD89 108 aa8.37□□□□□ -1.07
PHGDH-201ENST00000369407 VWFP04275 2813 aa8.36□□□□□ -1.07
PHGDH-201ENST00000369407 REG3AQ06141 175 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 TM2D3Q9BRN9 247 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
PHGDH-201ENST00000369407 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
PHGDH-201ENST00000369407 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
PHGDH-201ENST00000369407 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
PHGDH-201ENST00000369407 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
PHGDH-201ENST00000369407 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 Q8N9L7 120 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 CYSRT1A8MQ03 144 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 HTN3P15516 51 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 COX17Q14061 63 aa8.32□□□□□ -1.08
PHGDH-201ENST00000369407 MIFP14174 115 aa8.3□□□□□ -1.08
PHGDH-201ENST00000369407 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
PHGDH-201ENST00000369407 X6R8D5 127 aa8.3□□□□□ -1.08
PHGDH-201ENST00000369407 CMC4P56277 68 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-201ENST00000369407 MUC7Q8TAX7 377 aa8.29□□□□□ -1.08
PHGDH-201ENST00000369407 IGHV4-28A0A0C4DH34 117 aa8.29□□□□□ -1.08
PHGDH-201ENST00000369407 PSPHP1O15172 72 aa8.29□□□□□ -1.08
PHGDH-201ENST00000369407 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 PRR4Q16378 134 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 KLK12Q9UKR0 248 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-201ENST00000369407 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
PHGDH-201ENST00000369407 IGLV6-57P01721 117 aa8.27□□□□□ -1.09
PHGDH-201ENST00000369407 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
PHGDH-201ENST00000369407 LINC00612Q8N6U2 182 aa8.26□□□□□ -1.09
PHGDH-201ENST00000369407 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
PHGDH-201ENST00000369407 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
PHGDH-201ENST00000369407 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
PHGDH-201ENST00000369407 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 NREPQ16612 68 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 C6orf48Q9UBA6 75 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 EPM2AB3EWF7 344 aa8.24□□□□□ -1.09
PHGDH-201ENST00000369407 F8P00451 2351 aa8.23□□□□□ -1.09
PHGDH-201ENST00000369407 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-201ENST00000369407 FUSP35637 526 aaKnown RBP eCLIP8.23□□□□□ -1.09
PHGDH-201ENST00000369407 BPY2O14599 106 aa8.22□□□□□ -1.09
PHGDH-201ENST00000369407 COX7BP24311 80 aa8.22□□□□□ -1.09
PHGDH-201ENST00000369407 CXCL6P80162 114 aa8.22□□□□□ -1.09
PHGDH-201ENST00000369407 ATRQ13535 2644 aa8.22□□□□□ -1.09
PHGDH-201ENST00000369407 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
PHGDH-201ENST00000369407 C3orf84H3BNL1 204 aa8.21□□□□□ -1.1
PHGDH-201ENST00000369407 ESRGQ1W209 222 aa8.21□□□□□ -1.1
PHGDH-201ENST00000369407 C9orf66Q5T8R8 295 aa8.21□□□□□ -1.1
PHGDH-201ENST00000369407 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
PHGDH-201ENST00000369407 IGHV4-30-4P0DP06 118 aa8.2□□□□□ -1.1
PHGDH-201ENST00000369407 HIGD2AQ9BW72 106 aa8.2□□□□□ -1.1
PHGDH-201ENST00000369407 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
PHGDH-201ENST00000369407 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
PHGDH-201ENST00000369407 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
PHGDH-201ENST00000369407 TRRAPQ9Y4A5 3859 aa8.18□□□□□ -1.1
PHGDH-201ENST00000369407 PDE6GP18545 87 aa8.18□□□□□ -1.1
PHGDH-201ENST00000369407 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
PHGDH-201ENST00000369407 BCE1O60756 84 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms