RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 A0A1B0GV90 55 aa15.47■□□□□ 0.07
SNX3-203ENST00000368979 XAGE1AQ9HD64 81 aa15.47■□□□□ 0.07
SNX3-203ENST00000368979 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.46■□□□□ 0.07
SNX3-203ENST00000368979 TSPAN13O95857 204 aa15.46■□□□□ 0.07
SNX3-203ENST00000368979 Q8N814 137 aa15.46■□□□□ 0.07
SNX3-203ENST00000368979 Q8NDZ9 215 aa15.46■□□□□ 0.07
SNX3-203ENST00000368979 H3BUT2 72 aa15.45■□□□□ 0.06
SNX3-203ENST00000368979 NAA38Q9BRA0 125 aaKnown RBP15.45■□□□□ 0.06
SNX3-203ENST00000368979 GAGE2EQ4V326 116 aa15.44■□□□□ 0.06
SNX3-203ENST00000368979 GAGE2DQ9UEU5 116 aa15.44■□□□□ 0.06
SNX3-203ENST00000368979 DNAH2Q9P225 4427 aa15.44■□□□□ 0.06
SNX3-203ENST00000368979 RYR3Q15413 4870 aa15.44■□□□□ 0.06
SNX3-203ENST00000368979 RPL18AQ02543 176 aaKnown RBP15.43■□□□□ 0.06
SNX3-203ENST00000368979 LINC00337Q8N6G1 96 aa15.43■□□□□ 0.06
SNX3-203ENST00000368979 LOC107984640A0A0U1RRK4 108 aa15.42■□□□□ 0.06
SNX3-203ENST00000368979 RPL13AP40429 203 aaKnown RBP15.42■□□□□ 0.06
SNX3-203ENST00000368979 TRAV13-2A0A0B4J235 113 aa15.41■□□□□ 0.06
SNX3-203ENST00000368979 C9orf129Q5T035 196 aaKnown RBP15.41■□□□□ 0.06
SNX3-203ENST00000368979 LCE6AA0A183 80 aa15.38■□□□□ 0.05
SNX3-203ENST00000368979 H7C2G1 150 aa15.38■□□□□ 0.05
SNX3-203ENST00000368979 PRR3P79522 188 aaKnown RBP15.38■□□□□ 0.05
SNX3-203ENST00000368979 A0A1W2PPM0 123 aa15.38■□□□□ 0.05
SNX3-203ENST00000368979 C9orf163Q8N9P6 203 aa15.38■□□□□ 0.05
SNX3-203ENST00000368979 Q1RN00 199 aa15.37■□□□□ 0.05
SNX3-203ENST00000368979 NCR3O14931 201 aa15.36■□□□□ 0.05
SNX3-203ENST00000368979 RTL8CO15255 209 aa15.36■□□□□ 0.05
SNX3-203ENST00000368979 VPREB1P12018 145 aa15.36■□□□□ 0.05
SNX3-203ENST00000368979 GAGE2BQ13066 116 aa15.36■□□□□ 0.05
SNX3-203ENST00000368979 TRBV10-2A0A0K0K1G8 114 aa15.34■□□□□ 0.05
SNX3-203ENST00000368979 TNP2Q05952 138 aa15.33■□□□□ 0.05
SNX3-203ENST00000368979 C16orf90A8MZG2 172 aa15.33■□□□□ 0.04
SNX3-203ENST00000368979 PLA2G2DQ9UNK4 145 aa15.33■□□□□ 0.04
SNX3-203ENST00000368979 DNAH17Q9UFH2 4485 aa15.32■□□□□ 0.04
SNX3-203ENST00000368979 HYDINQ4G0P3 5121 aa15.32■□□□□ 0.04
SNX3-203ENST00000368979 FABP2P12104 132 aa15.32■□□□□ 0.04
SNX3-203ENST00000368979 A0A096LNI7 61 aa15.31■□□□□ 0.04
SNX3-203ENST00000368979 OR13C6PQ8NH95 151 aa15.31■□□□□ 0.04
SNX3-203ENST00000368979 PKIGQ9Y2B9 76 aa15.31■□□□□ 0.04
SNX3-203ENST00000368979 VAMP3Q15836 100 aa15.3■□□□□ 0.04
SNX3-203ENST00000368979 TRIAP1O43715 76 aa15.29■□□□□ 0.04
SNX3-203ENST00000368979 PSMB2P49721 201 aa15.29■□□□□ 0.04
SNX3-203ENST00000368979 SERTAD4-AS1Q5TG53 156 aa15.29■□□□□ 0.04
SNX3-203ENST00000368979 SACSQ9NZJ4 4579 aa15.28■□□□□ 0.04
SNX3-203ENST00000368979 TMEM126AQ9H061 195 aa15.28■□□□□ 0.04
SNX3-203ENST00000368979 SDIM1Q6ZPB5 146 aa15.27■□□□□ 0.04
SNX3-203ENST00000368979 RPL28P46779 137 aaKnown RBP15.27■□□□□ 0.03
SNX3-203ENST00000368979 LINC01620Q4KN68 170 aa15.27■□□□□ 0.03
SNX3-203ENST00000368979 SMIM11BQ8TCY0 68 aa15.27■□□□□ 0.03
SNX3-203ENST00000368979 IGLV5-37A0A075B6J1 123 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 FAM168BA1KXE4 195 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 M0R378 163 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 IGLV6-57P01721 117 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 S100A7L2Q5SY68 101 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 LYRM7Q5U5X0 104 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 SPCS1Q9Y6A9 102 aa15.26■□□□□ 0.03
SNX3-203ENST00000368979 KRTAP7-1Q8IUC3 87 aa15.25■□□□□ 0.03
SNX3-203ENST00000368979 IGKV2-24A0A0C4DH68 120 aa15.24■□□□□ 0.03
SNX3-203ENST00000368979 K7EP34 96 aa15.24■□□□□ 0.03
SNX3-203ENST00000368979 SCGB1C2P0DMR2 95 aa15.22■□□□□ 0.03
SNX3-203ENST00000368979 FUSP35637 526 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNX3-203ENST00000368979 NKAPP1Q8N9T2 125 aa15.22■□□□□ 0.03
SNX3-203ENST00000368979 TRBV10-3A0A0K0K1G6 114 aa15.22■□□□□ 0.03
SNX3-203ENST00000368979 IGLV5-52A0A0A0MRZ9 124 aa15.21■□□□□ 0.03
SNX3-203ENST00000368979 GAGE10A6NGK3 116 aa15.21■□□□□ 0.03
SNX3-203ENST00000368979 COX6CP09669 75 aa15.21■□□□□ 0.03
SNX3-203ENST00000368979 CHTF8P0CG12 524 aa15.21■□□□□ 0.03
SNX3-203ENST00000368979 FRAS1Q86XX4 4008 aa15.2■□□□□ 0.02
SNX3-203ENST00000368979 FAM19A5Q7Z5A7 132 aaPredicted RBP15.2■□□□□ 0.02
SNX3-203ENST00000368979 GTF2H5Q6ZYL4 71 aa15.19■□□□□ 0.02
SNX3-203ENST00000368979 C7orf33Q8WU49 177 aa15.18■□□□□ 0.02
SNX3-203ENST00000368979 LINC00474Q9P2X8 69 aa15.18■□□□□ 0.02
SNX3-203ENST00000368979 A0A1W2PNN7 141 aa15.17■□□□□ 0.02
SNX3-203ENST00000368979 TCL1BO95988 128 aa15.17■□□□□ 0.02
SNX3-203ENST00000368979 UBE2V1Q13404 147 aa15.17■□□□□ 0.02
SNX3-203ENST00000368979 C22orf24Q9Y442 160 aa15.17■□□□□ 0.02
SNX3-203ENST00000368979 TRBV20-1A0A075B6N2 111 aa15.17■□□□□ 0.02
SNX3-203ENST00000368979 TRAV23DV6A0A075B6W5 121 aa15.15■□□□□ 0.02
SNX3-203ENST00000368979 PANO1I0J062 215 aa15.15■□□□□ 0.02
SNX3-203ENST00000368979 KRTAP10-2P60368 255 aa15.15■□□□□ 0.02
SNX3-203ENST00000368979 MRPL55Q7Z7F7 128 aaKnown RBP15.13■□□□□ 0.01
SNX3-203ENST00000368979 SPACA4Q8TDM5 124 aa15.13■□□□□ 0.01
SNX3-203ENST00000368979 CLEC2BQ92478 149 aa15.13■□□□□ 0.01
SNX3-203ENST00000368979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.12■□□□□ 0.01
SNX3-203ENST00000368979 H3BMG7 143 aa15.12■□□□□ 0.01
SNX3-203ENST00000368979 M0QXV9 152 aa15.12■□□□□ 0.01
SNX3-203ENST00000368979 C6orf99Q4VX62 202 aa15.12■□□□□ 0.01
SNX3-203ENST00000368979 LINC00167Q96N53 147 aa15.12■□□□□ 0.01
SNX3-203ENST00000368979 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
SNX3-203ENST00000368979 FAT2Q9NYQ8 4349 aa15.11■□□□□ 0.01
SNX3-203ENST00000368979 RYR2Q92736 4967 aa15.11■□□□□ 0.01
SNX3-203ENST00000368979 DNAH11Q96DT5 4516 aa15.1■□□□□ 0.01
SNX3-203ENST00000368979 H0YGX0 51 aa15.1■□□□□ 0.01
SNX3-203ENST00000368979 LST1O00453 97 aa15.1■□□□□ 0.01
SNX3-203ENST00000368979 ATXN8Q156A1 80 aa15.1■□□□□ 0.01
SNX3-203ENST00000368979 IGLV1-50A0A075B6I6 118 aa15.09■□□□□ 0.01
SNX3-203ENST00000368979 LINC00336Q6ZUF6 198 aa15.09■□□□□ 0.01
SNX3-203ENST00000368979 KCNQ1DNQ9H478 68 aa15.09■□□□□ 0.01
SNX3-203ENST00000368979 ZNF73O43830 326 aaPredicted RBP15.08■□□□□ 0.01
SNX3-203ENST00000368979 FAM218AQ96MZ4 157 aa15.08■□□□□ 0.01
SNX3-203ENST00000368979 HECTD4Q9Y4D8 3996 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms