RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 LINC01561Q8N1V8 128 aa12.43□□□□□ -0.42
SNX27-202ENST00000368841 IGHV3OR16-9A0A0B4J2B5 98 aa12.4□□□□□ -0.42
SNX27-202ENST00000368841 SPINT4Q6UDR6 99 aa12.4□□□□□ -0.42
SNX27-202ENST00000368841 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
SNX27-202ENST00000368841 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
SNX27-202ENST00000368841 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
SNX27-202ENST00000368841 J3QL48 77 aa12.38□□□□□ -0.43
SNX27-202ENST00000368841 PIEZO2Q9H5I5 2752 aa12.38□□□□□ -0.43
SNX27-202ENST00000368841 C9orf92A6NGG3 77 aa12.37□□□□□ -0.43
SNX27-202ENST00000368841 EP400Q96L91 3159 aa12.36□□□□□ -0.43
SNX27-202ENST00000368841 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
SNX27-202ENST00000368841 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
SNX27-202ENST00000368841 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
SNX27-202ENST00000368841 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
SNX27-202ENST00000368841 Q6ZRX8 168 aa12.33□□□□□ -0.44
SNX27-202ENST00000368841 FAM19A4Q96LR4 140 aa12.33□□□□□ -0.44
SNX27-202ENST00000368841 Q8NBF4 154 aa12.33□□□□□ -0.44
SNX27-202ENST00000368841 Q6ZQT0 140 aa12.33□□□□□ -0.44
SNX27-202ENST00000368841 COL4A2P08572 1712 aa12.33□□□□□ -0.44
SNX27-202ENST00000368841 Q6ZRP5 223 aa12.32□□□□□ -0.44
SNX27-202ENST00000368841 ACACBO00763 2458 aa12.32□□□□□ -0.44
SNX27-202ENST00000368841 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
SNX27-202ENST00000368841 DNAH10OSP0CZ25 163 aa12.31□□□□□ -0.44
SNX27-202ENST00000368841 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
SNX27-202ENST00000368841 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 COX6B2Q6YFQ2 88 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 DSCR10P59022 87 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 SSBP3-AS1Q7Z2R9 100 aa12.28□□□□□ -0.44
SNX27-202ENST00000368841 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
SNX27-202ENST00000368841 C10orf142B7Z368 130 aa12.27□□□□□ -0.45
SNX27-202ENST00000368841 SMR3BP02814 79 aaPredicted RBP12.26□□□□□ -0.45
SNX27-202ENST00000368841 Q8NAQ8 132 aa12.26□□□□□ -0.45
SNX27-202ENST00000368841 BCE1O60756 84 aa12.24□□□□□ -0.45
SNX27-202ENST00000368841 K7EQZ3 153 aa12.23□□□□□ -0.45
SNX27-202ENST00000368841 TRAV22A0A0B4J277 110 aa12.22□□□□□ -0.45
SNX27-202ENST00000368841 ANAPC11Q9NYG5 84 aa12.21□□□□□ -0.45
SNX27-202ENST00000368841 TTC28Q96AY4 2481 aa12.21□□□□□ -0.45
SNX27-202ENST00000368841 CCDC168Q8NDH2 2452 aa12.2□□□□□ -0.46
SNX27-202ENST00000368841 ATRXP46100 2492 aa12.2□□□□□ -0.46
SNX27-202ENST00000368841 KRTAP10-11P60412 298 aa12.19□□□□□ -0.46
SNX27-202ENST00000368841 IGLV6-57P01721 117 aa12.18□□□□□ -0.46
SNX27-202ENST00000368841 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
SNX27-202ENST00000368841 OBSCN-AS1Q96MR7 158 aa12.18□□□□□ -0.46
SNX27-202ENST00000368841 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
SNX27-202ENST00000368841 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
SNX27-202ENST00000368841 WDR87Q6ZQQ6 2873 aa12.16□□□□□ -0.46
SNX27-202ENST00000368841 GVQW2A0A096LPI5 108 aaPredicted RBP12.15□□□□□ -0.46
SNX27-202ENST00000368841 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
SNX27-202ENST00000368841 PRO0628Q9UI54 55 aa12.14□□□□□ -0.47
SNX27-202ENST00000368841 IGF2RP11717 2491 aa12.13□□□□□ -0.47
SNX27-202ENST00000368841 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
SNX27-202ENST00000368841 LINC01600Q96MT4 127 aa12.13□□□□□ -0.47
SNX27-202ENST00000368841 H3BNG1 76 aa12.12□□□□□ -0.47
SNX27-202ENST00000368841 WWC2-AS2Q96NR7 200 aa12.12□□□□□ -0.47
SNX27-202ENST00000368841 C8orf87E5RJ46 101 aa12.12□□□□□ -0.47
SNX27-202ENST00000368841 COA5Q86WW8 74 aa12.12□□□□□ -0.47
SNX27-202ENST00000368841 PCSK5Q92824 1860 aa12.11□□□□□ -0.47
SNX27-202ENST00000368841 PRO0461Q9UI25 63 aa12.11□□□□□ -0.47
SNX27-202ENST00000368841 LINC01554Q52M75 96 aa12.1□□□□□ -0.47
SNX27-202ENST00000368841 A8MWP4 228 aa12.1□□□□□ -0.47
SNX27-202ENST00000368841 MRPL34Q9BQ48 92 aaKnown RBP12.09□□□□□ -0.47
SNX27-202ENST00000368841 VPREB1P12018 145 aa12.09□□□□□ -0.47
SNX27-202ENST00000368841 C15orf56Q8N910 161 aa12.09□□□□□ -0.47
SNX27-202ENST00000368841 A8MUN3 132 aa12.07□□□□□ -0.48
SNX27-202ENST00000368841 IGLV1-50A0A075B6I6 118 aa12.06□□□□□ -0.48
SNX27-202ENST00000368841 IGFL1Q6UW32 110 aa12.05□□□□□ -0.48
SNX27-202ENST00000368841 A0A0D9SG42 100 aa12.05□□□□□ -0.48
SNX27-202ENST00000368841 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
SNX27-202ENST00000368841 K7EIL1 84 aa12.03□□□□□ -0.48
SNX27-202ENST00000368841 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
SNX27-202ENST00000368841 LITAFQ99732 161 aa12.03□□□□□ -0.48
SNX27-202ENST00000368841 KRTAP10-3P60369 221 aa12.02□□□□□ -0.49
SNX27-202ENST00000368841 LRRK2Q5S007 2527 aa12.02□□□□□ -0.49
SNX27-202ENST00000368841 NCOR2Q9Y618 2525 aa12□□□□□ -0.49
SNX27-202ENST00000368841 LOC101927531A0A1B0GV80 90 aa12□□□□□ -0.49
SNX27-202ENST00000368841 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
SNX27-202ENST00000368841 CENPFP49454 3210 aa11.99□□□□□ -0.49
SNX27-202ENST00000368841 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
SNX27-202ENST00000368841 H3BPC8 53 aa11.98□□□□□ -0.49
SNX27-202ENST00000368841 DOPEY1Q5JWR5 2465 aa11.97□□□□□ -0.49
SNX27-202ENST00000368841 UTRNP46939 3433 aa11.97□□□□□ -0.49
SNX27-202ENST00000368841 C8orf17Q9NRJ1 99 aa11.95□□□□□ -0.5
SNX27-202ENST00000368841 IGLV5-37A0A075B6J1 123 aa11.95□□□□□ -0.5
SNX27-202ENST00000368841 CASC10Q5T4H9 136 aa11.94□□□□□ -0.5
SNX27-202ENST00000368841 CSNK1G2-AS1Q8NCQ2 148 aa11.94□□□□□ -0.5
SNX27-202ENST00000368841 Q8N1X5 172 aa11.93□□□□□ -0.5
SNX27-202ENST00000368841 MIR22HGQ0VDD5 57 aa11.92□□□□□ -0.5
SNX27-202ENST00000368841 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
SNX27-202ENST00000368841 PRR15Q8IV56 129 aa11.89□□□□□ -0.51
SNX27-202ENST00000368841 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
SNX27-202ENST00000368841 Q8N377 158 aa11.89□□□□□ -0.51
SNX27-202ENST00000368841 A0A1B0GW54 56 aa11.89□□□□□ -0.51
SNX27-202ENST00000368841 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
SNX27-202ENST00000368841 A0A087WTM6 91 aa11.88□□□□□ -0.51
SNX27-202ENST00000368841 A0A1B0GVX0 72 aa11.88□□□□□ -0.51
SNX27-202ENST00000368841 ZNF861PO60384 105 aa11.88□□□□□ -0.51
SNX27-202ENST00000368841 UQCR11O14957 56 aa11.87□□□□□ -0.51
SNX27-202ENST00000368841 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms