RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LINC00614P0C842 121 aa9.24□□□□□ -0.93
CKS1B-202ENST00000368436 TPRXLQ17RH7 258 aa9.24□□□□□ -0.93
CKS1B-202ENST00000368436 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
CKS1B-202ENST00000368436 C18orf32Q8TCD1 76 aa9.24□□□□□ -0.93
CKS1B-202ENST00000368436 ZNF625Q96I27 306 aaPredicted RBP9.24□□□□□ -0.93
CKS1B-202ENST00000368436 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
CKS1B-202ENST00000368436 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
CKS1B-202ENST00000368436 HBDP02042 147 aa9.23□□□□□ -0.93
CKS1B-202ENST00000368436 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
CKS1B-202ENST00000368436 RHEBQ15382 184 aa9.22□□□□□ -0.93
CKS1B-202ENST00000368436 IGLV7-46A0A075B6I9 117 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 BAGE3Q86Y29 109 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 CBLN2Q8IUK8 224 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 CDIP1Q9H305 208 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 RPS10P5Q9NQ39 176 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.94
CKS1B-202ENST00000368436 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
CKS1B-202ENST00000368436 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
CKS1B-202ENST00000368436 TRAPPC1Q9Y5R8 145 aa9.2□□□□□ -0.94
CKS1B-202ENST00000368436 COMMD7Q86VX2 200 aa9.19□□□□□ -0.94
CKS1B-202ENST00000368436 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
CKS1B-202ENST00000368436 SPRR4Q96PI1 79 aa9.18□□□□□ -0.94
CKS1B-202ENST00000368436 HIGD2AQ9BW72 106 aa9.18□□□□□ -0.94
CKS1B-202ENST00000368436 LINC00158P58513 81 aa9.17□□□□□ -0.94
CKS1B-202ENST00000368436 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
CKS1B-202ENST00000368436 CHTOPQ9Y3Y2 248 aaKnown RBP9.16□□□□□ -0.94
CKS1B-202ENST00000368436 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
CKS1B-202ENST00000368436 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
CKS1B-202ENST00000368436 A0A0U1RRA0 63 aa9.13□□□□□ -0.95
CKS1B-202ENST00000368436 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
CKS1B-202ENST00000368436 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
CKS1B-202ENST00000368436 PRYO14603 147 aa9.12□□□□□ -0.95
CKS1B-202ENST00000368436 SPRR1AP35321 89 aa9.12□□□□□ -0.95
CKS1B-202ENST00000368436 LINC00337Q8N6G1 96 aa9.12□□□□□ -0.95
CKS1B-202ENST00000368436 SMIM13P0DJ93 91 aa9.11□□□□□ -0.95
CKS1B-202ENST00000368436 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
CKS1B-202ENST00000368436 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
CKS1B-202ENST00000368436 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
CKS1B-202ENST00000368436 BOD1L2Q8IYS8 172 aa9.1□□□□□ -0.95
CKS1B-202ENST00000368436 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
CKS1B-202ENST00000368436 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
CKS1B-202ENST00000368436 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
CKS1B-202ENST00000368436 ATP6V1G1O75348 118 aa9.08□□□□□ -0.96
CKS1B-202ENST00000368436 HERV-K104P63124 156 aa9.08□□□□□ -0.96
CKS1B-202ENST00000368436 MIR7-3HGQ8N6C7 128 aa9.08□□□□□ -0.96
CKS1B-202ENST00000368436 DAND5Q8N907 189 aa9.08□□□□□ -0.96
CKS1B-202ENST00000368436 Q8NBF4 154 aa9.08□□□□□ -0.96
CKS1B-202ENST00000368436 NCR3O14931 201 aa9.07□□□□□ -0.96
CKS1B-202ENST00000368436 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
CKS1B-202ENST00000368436 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
CKS1B-202ENST00000368436 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
CKS1B-202ENST00000368436 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
CKS1B-202ENST00000368436 ETDCA0A1B0GVM5 59 aa9.05□□□□□ -0.96
CKS1B-202ENST00000368436 SPINK1P00995 79 aa9.05□□□□□ -0.96
CKS1B-202ENST00000368436 APOC3P02656 99 aa9.05□□□□□ -0.96
CKS1B-202ENST00000368436 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
CKS1B-202ENST00000368436 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
CKS1B-202ENST00000368436 SNAPINO95295 136 aa9.04□□□□□ -0.96
CKS1B-202ENST00000368436 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
CKS1B-202ENST00000368436 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
CKS1B-202ENST00000368436 SVBPQ8N300 66 aa9.03□□□□□ -0.96
CKS1B-202ENST00000368436 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
CKS1B-202ENST00000368436 B5MCH6 92 aa9.02□□□□□ -0.97
CKS1B-202ENST00000368436 ASB16-AS1Q495Z4 193 aa9.02□□□□□ -0.97
CKS1B-202ENST00000368436 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
CKS1B-202ENST00000368436 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
CKS1B-202ENST00000368436 S100A12P80511 92 aa9□□□□□ -0.97
CKS1B-202ENST00000368436 NDUFA5Q16718 116 aa9□□□□□ -0.97
CKS1B-202ENST00000368436 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
CKS1B-202ENST00000368436 FAM19A2Q8N3H0 131 aa9□□□□□ -0.97
CKS1B-202ENST00000368436 TRBV10-2A0A0K0K1G8 114 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 HSBP1O75506 76 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 TSPEAR-AS2P59090 65 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
CKS1B-202ENST00000368436 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
CKS1B-202ENST00000368436 LEPROTO15243 131 aa8.97□□□□□ -0.97
CKS1B-202ENST00000368436 DDTP30046 118 aa8.97□□□□□ -0.97
CKS1B-202ENST00000368436 MOBPQ13875 183 aa8.97□□□□□ -0.97
CKS1B-202ENST00000368436 Q8N377 158 aa8.97□□□□□ -0.97
CKS1B-202ENST00000368436 Q9BRP9 147 aa8.97□□□□□ -0.97
CKS1B-202ENST00000368436 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
CKS1B-202ENST00000368436 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
CKS1B-202ENST00000368436 Q6ZRX8 168 aa8.96□□□□□ -0.98
CKS1B-202ENST00000368436 H0Y8G0 127 aa8.95□□□□□ -0.98
CKS1B-202ENST00000368436 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
CKS1B-202ENST00000368436 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
CKS1B-202ENST00000368436 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
CKS1B-202ENST00000368436 SPANXB1Q9NS25 103 aaPredicted RBP8.94□□□□□ -0.98
CKS1B-202ENST00000368436 J3QQQ9 107 aa8.93□□□□□ -0.98
CKS1B-202ENST00000368436 NDUFC2O95298 119 aa8.93□□□□□ -0.98
CKS1B-202ENST00000368436 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
CKS1B-202ENST00000368436 PLNP26678 52 aa8.93□□□□□ -0.98
CKS1B-202ENST00000368436 LINC00310P59036 64 aa8.93□□□□□ -0.98
CKS1B-202ENST00000368436 SLC25A20O43772 301 aa8.92□□□□□ -0.98
CKS1B-202ENST00000368436 NMUP48645 174 aa8.92□□□□□ -0.98
CKS1B-202ENST00000368436 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
CKS1B-202ENST00000368436 SERF1AO75920 110 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms