RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 A0A096LNI7 61 aa6.36□□□□□ -1.39
SYNE1-209ENST00000367257 PRM2P04554 102 aa6.36□□□□□ -1.39
SYNE1-209ENST00000367257 PTPRBP23467 1997 aa6.35□□□□□ -1.39
SYNE1-209ENST00000367257 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
SYNE1-209ENST00000367257 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SYNE1-209ENST00000367257 KALRNO60229 2985 aa6.35□□□□□ -1.39
SYNE1-209ENST00000367257 C7orf65Q6ZTY9 151 aa6.35□□□□□ -1.39
SYNE1-209ENST00000367257 H3BS24 57 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 PRR15Q8IV56 129 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 DMXL2Q8TDJ6 3036 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 ARHGAP32A7KAX9 2087 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 MUC4Q99102 2169 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 CPAMD8Q8IZJ3 1885 aa6.34□□□□□ -1.39
SYNE1-209ENST00000367257 AKAP13Q12802 2813 aa6.34□□□□□ -1.4
SYNE1-209ENST00000367257 H0Y9P7 68 aa6.34□□□□□ -1.4
SYNE1-209ENST00000367257 ZNF843Q8N446 348 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 MYO9AB2RTY4 2548 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 WISP2O76076 250 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
SYNE1-209ENST00000367257 AGRNO00468 2067 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 NCOA6Q14686 2063 aaPredicted RBP6.33□□□□□ -1.4
SYNE1-209ENST00000367257 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
SYNE1-209ENST00000367257 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
SYNE1-209ENST00000367257 ITPR1Q14643 2758 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 LY6G6DO95868 133 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 H3BNG1 76 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 Q9BRP9 147 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 IGHV4-30-4P0DP06 118 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 ATP11AUNQ6ZP68 121 aa6.32□□□□□ -1.4
SYNE1-209ENST00000367257 SMCR5Q8TEV8 140 aa6.31□□□□□ -1.4
SYNE1-209ENST00000367257 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
SYNE1-209ENST00000367257 COX6A2Q02221 97 aa6.31□□□□□ -1.4
SYNE1-209ENST00000367257 KIF25-AS1Q9Y6Z4 181 aa6.31□□□□□ -1.4
SYNE1-209ENST00000367257 NAV2Q8IVL1 2488 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 C10orf99Q6UWK7 81 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 A8MUN3 132 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 KLKP1Q107X0 134 aa6.3□□□□□ -1.4
SYNE1-209ENST00000367257 PCNX3Q9H6A9 2034 aa6.29□□□□□ -1.4
SYNE1-209ENST00000367257 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
SYNE1-209ENST00000367257 CHD8Q9HCK8 2581 aa6.29□□□□□ -1.4
SYNE1-209ENST00000367257 JMJD1CQ15652 2540 aa6.29□□□□□ -1.4
SYNE1-209ENST00000367257 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
SYNE1-209ENST00000367257 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
SYNE1-209ENST00000367257 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
SYNE1-209ENST00000367257 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
SYNE1-209ENST00000367257 C6orf223Q8N319 242 aa6.28□□□□□ -1.4
SYNE1-209ENST00000367257 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.4
SYNE1-209ENST00000367257 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 H7BZZ5 65 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 TM2D3Q9BRN9 247 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 RBM12B-AS1Q9P1G2 102 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 A0A087WSZ3 146 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 ACYP2P14621 99 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 KLK9Q2XQG4 91 aa6.26□□□□□ -1.41
SYNE1-209ENST00000367257 TLN1Q9Y490 2541 aaKnown RBP6.26□□□□□ -1.41
SYNE1-209ENST00000367257 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
SYNE1-209ENST00000367257 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
SYNE1-209ENST00000367257 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
SYNE1-209ENST00000367257 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 Q5XG85 94 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 C9orf116Q5BN46 136 aaPredicted RBP6.24□□□□□ -1.41
SYNE1-209ENST00000367257 C18orf65Q6ZTR6 163 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 Q6ZTC4 211 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 Q9UF83 564 aa6.24□□□□□ -1.41
SYNE1-209ENST00000367257 CDSNQ15517 529 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 FSHBP01225 129 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 ZFYVE26Q68DK2 2539 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 RELNP78509 3460 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
SYNE1-209ENST00000367257 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
SYNE1-209ENST00000367257 SPATA3Q8NHX4 192 aa6.22□□□□□ -1.41
SYNE1-209ENST00000367257 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
SYNE1-209ENST00000367257 CIRBP-AS1Q8TBR5 109 aa6.22□□□□□ -1.41
SYNE1-209ENST00000367257 FAM218AQ96MZ4 157 aa6.21□□□□□ -1.42
SYNE1-209ENST00000367257 LINC00315P59091 139 aa6.21□□□□□ -1.42
SYNE1-209ENST00000367257 ZFHX3Q15911 3703 aa6.21□□□□□ -1.42
SYNE1-209ENST00000367257 CEP295Q9C0D2 2601 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 AVPP01185 164 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 Q6ZRU5 148 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 Q8NBF4 154 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 ACANP16112 2415 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 A0A1B0GU69 56 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 C22orf24Q9Y442 160 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 MOBPQ13875 183 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 DSCAMO60469 2012 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 PIEZO2Q9H5I5 2752 aa6.2□□□□□ -1.42
SYNE1-209ENST00000367257 LRRK2Q5S007 2527 aa6.19□□□□□ -1.42
SYNE1-209ENST00000367257 Q6ZQT0 140 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms