RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
SYNE1-205ENST00000367251 SETD2Q9BYW2 2564 aaPredicted RBP6.3□□□□□ -1.4
SYNE1-205ENST00000367251 GOLGB1Q14789 3259 aaKnown RBP6.3□□□□□ -1.4
SYNE1-205ENST00000367251 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 H3BNG1 76 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
SYNE1-205ENST00000367251 TYMSOSQ8TAI1 123 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 PTPRBP23467 1997 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 CRYGAP11844 174 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
SYNE1-205ENST00000367251 ARHGAP32A7KAX9 2087 aa6.29□□□□□ -1.4
SYNE1-205ENST00000367251 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
SYNE1-205ENST00000367251 USP9YO00507 2555 aaPredicted RBP6.28□□□□□ -1.4
SYNE1-205ENST00000367251 A0A087WVE0 104 aa6.28□□□□□ -1.4
SYNE1-205ENST00000367251 Q8N3U1 123 aa6.28□□□□□ -1.4
SYNE1-205ENST00000367251 HCG22E2RYF7 251 aa6.27□□□□□ -1.41
SYNE1-205ENST00000367251 COL27A1Q8IZC6 1860 aaPredicted RBP6.27□□□□□ -1.41
SYNE1-205ENST00000367251 EP400Q96L91 3159 aa6.27□□□□□ -1.41
SYNE1-205ENST00000367251 MOBPQ13875 183 aa6.25□□□□□ -1.41
SYNE1-205ENST00000367251 A8MTW9 85 aa6.25□□□□□ -1.41
SYNE1-205ENST00000367251 H0Y9P7 68 aa6.24□□□□□ -1.41
SYNE1-205ENST00000367251 Q6ZRU5 148 aa6.24□□□□□ -1.41
SYNE1-205ENST00000367251 SMCR5Q8TEV8 140 aa6.24□□□□□ -1.41
SYNE1-205ENST00000367251 LOC110117498A0A087WWA1 95 aa6.24□□□□□ -1.41
SYNE1-205ENST00000367251 LITAFQ99732 161 aa6.22□□□□□ -1.41
SYNE1-205ENST00000367251 TMEM254Q8TBM7 123 aa6.22□□□□□ -1.41
SYNE1-205ENST00000367251 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
SYNE1-205ENST00000367251 Q6ZRP5 223 aa6.22□□□□□ -1.41
SYNE1-205ENST00000367251 RTL8CO15255 209 aa6.21□□□□□ -1.42
SYNE1-205ENST00000367251 RPL37AP61513 92 aaKnown RBP6.21□□□□□ -1.42
SYNE1-205ENST00000367251 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
SYNE1-205ENST00000367251 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
SYNE1-205ENST00000367251 C22orf24Q9Y442 160 aa6.21□□□□□ -1.42
SYNE1-205ENST00000367251 GVQW2A0A096LPI5 108 aaPredicted RBP6.21□□□□□ -1.42
SYNE1-205ENST00000367251 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
SYNE1-205ENST00000367251 SPATA3Q8NHX4 192 aa6.2□□□□□ -1.42
SYNE1-205ENST00000367251 SPTBN4Q9H254 2564 aa6.2□□□□□ -1.42
SYNE1-205ENST00000367251 FAM218AQ96MZ4 157 aa6.19□□□□□ -1.42
SYNE1-205ENST00000367251 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
SYNE1-205ENST00000367251 AGRNO00468 2067 aa6.19□□□□□ -1.42
SYNE1-205ENST00000367251 Q6ZQT0 140 aa6.18□□□□□ -1.42
SYNE1-205ENST00000367251 A0A1B0GU69 56 aa6.18□□□□□ -1.42
SYNE1-205ENST00000367251 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
SYNE1-205ENST00000367251 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
SYNE1-205ENST00000367251 Q96NJ1 140 aa6.17□□□□□ -1.42
SYNE1-205ENST00000367251 NBDYA0A0U1RRE5 68 aa6.17□□□□□ -1.42
SYNE1-205ENST00000367251 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
SYNE1-205ENST00000367251 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
SYNE1-205ENST00000367251 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
SYNE1-205ENST00000367251 PCNTO95613 3336 aa6.15□□□□□ -1.42
SYNE1-205ENST00000367251 H3BPC8 53 aa6.15□□□□□ -1.42
SYNE1-205ENST00000367251 LINC00313P59037 77 aa6.15□□□□□ -1.42
SYNE1-205ENST00000367251 PSPHP1O15172 72 aa6.15□□□□□ -1.43
SYNE1-205ENST00000367251 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
SYNE1-205ENST00000367251 FLNBO75369 2602 aaKnown RBP6.14□□□□□ -1.43
SYNE1-205ENST00000367251 Q9UF83 564 aa6.14□□□□□ -1.43
SYNE1-205ENST00000367251 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
SYNE1-205ENST00000367251 Q8NAQ8 132 aa6.13□□□□□ -1.43
SYNE1-205ENST00000367251 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
SYNE1-205ENST00000367251 M0R2T5 61 aa6.13□□□□□ -1.43
SYNE1-205ENST00000367251 Q6ZRX8 168 aa6.13□□□□□ -1.43
SYNE1-205ENST00000367251 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
SYNE1-205ENST00000367251 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
SYNE1-205ENST00000367251 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
SYNE1-205ENST00000367251 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
SYNE1-205ENST00000367251 Q8NBF4 154 aa6.12□□□□□ -1.43
SYNE1-205ENST00000367251 CSNK1G2-AS1Q8NCQ2 148 aa6.11□□□□□ -1.43
SYNE1-205ENST00000367251 ERC2-IT1O76042 136 aa6.11□□□□□ -1.43
SYNE1-205ENST00000367251 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
SYNE1-205ENST00000367251 APLNQ9ULZ1 77 aa6.1□□□□□ -1.43
SYNE1-205ENST00000367251 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
SYNE1-205ENST00000367251 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
SYNE1-205ENST00000367251 A0A096LNT2 108 aa6.09□□□□□ -1.43
SYNE1-205ENST00000367251 LINC00612Q8N6U2 182 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 MGAM2Q2M2H8 2515 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 VPREB1P12018 145 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
SYNE1-205ENST00000367251 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
SYNE1-205ENST00000367251 DNAH10OSP0CZ25 163 aa6.07□□□□□ -1.44
SYNE1-205ENST00000367251 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 LINC00476Q8WZB0 136 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 LINC01600Q96MT4 127 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 ATRQ13535 2644 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 USP24Q9UPU5 2620 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
SYNE1-205ENST00000367251 CENPFP49454 3210 aa6.04□□□□□ -1.44
SYNE1-205ENST00000367251 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
SYNE1-205ENST00000367251 MAST4O15021 2626 aa6.03□□□□□ -1.44
SYNE1-205ENST00000367251 EPG5Q9HCE0 2579 aa6.03□□□□□ -1.44
SYNE1-205ENST00000367251 LINC00588Q9Y4M8 146 aa6.03□□□□□ -1.44
SYNE1-205ENST00000367251 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
SYNE1-205ENST00000367251 C19orf73Q9NVV2 129 aa6.02□□□□□ -1.45
SYNE1-205ENST00000367251 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
SYNE1-205ENST00000367251 CEP295Q9C0D2 2601 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms