RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 Q8N3U1 123 aa9.21□□□□□ -0.94
LDB3-202ENST00000361373 Q6ZVQ6 151 aa9.2□□□□□ -0.94
LDB3-202ENST00000361373 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
LDB3-202ENST00000361373 Q9UF83 564 aa9.19□□□□□ -0.94
LDB3-202ENST00000361373 CSNK1G2-AS1Q8NCQ2 148 aa9.19□□□□□ -0.94
LDB3-202ENST00000361373 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
LDB3-202ENST00000361373 MPLKIPQ8TAP9 179 aa9.18□□□□□ -0.94
LDB3-202ENST00000361373 CXCL6P80162 114 aa9.18□□□□□ -0.94
LDB3-202ENST00000361373 BRK1Q8WUW1 75 aa9.17□□□□□ -0.94
LDB3-202ENST00000361373 C19orf73Q9NVV2 129 aa9.17□□□□□ -0.94
LDB3-202ENST00000361373 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
LDB3-202ENST00000361373 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
LDB3-202ENST00000361373 RTL8CO15255 209 aa9.16□□□□□ -0.94
LDB3-202ENST00000361373 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
LDB3-202ENST00000361373 Q6ZRP5 223 aa9.15□□□□□ -0.94
LDB3-202ENST00000361373 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
LDB3-202ENST00000361373 HCG22E2RYF7 251 aa9.15□□□□□ -0.95
LDB3-202ENST00000361373 A0A087WVE0 104 aa9.14□□□□□ -0.95
LDB3-202ENST00000361373 Q6ZRX8 168 aa9.14□□□□□ -0.95
LDB3-202ENST00000361373 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
LDB3-202ENST00000361373 PRR4Q16378 134 aa9.13□□□□□ -0.95
LDB3-202ENST00000361373 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
LDB3-202ENST00000361373 SOSTDC1Q6X4U4 206 aa9.13□□□□□ -0.95
LDB3-202ENST00000361373 K7EIL1 84 aa9.12□□□□□ -0.95
LDB3-202ENST00000361373 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
LDB3-202ENST00000361373 CRYGAP11844 174 aa9.11□□□□□ -0.95
LDB3-202ENST00000361373 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
LDB3-202ENST00000361373 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
LDB3-202ENST00000361373 H0Y9P7 68 aa9.1□□□□□ -0.95
LDB3-202ENST00000361373 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
LDB3-202ENST00000361373 PRRC2CQ9Y520 2896 aaKnown RBP9.09□□□□□ -0.95
LDB3-202ENST00000361373 MOBPQ13875 183 aa9.09□□□□□ -0.95
LDB3-202ENST00000361373 Q8NBF4 154 aa9.09□□□□□ -0.95
LDB3-202ENST00000361373 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
LDB3-202ENST00000361373 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
LDB3-202ENST00000361373 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
LDB3-202ENST00000361373 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
LDB3-202ENST00000361373 BCE1O60756 84 aa9.08□□□□□ -0.96
LDB3-202ENST00000361373 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
LDB3-202ENST00000361373 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
LDB3-202ENST00000361373 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
LDB3-202ENST00000361373 A6NED7 52 aa9.07□□□□□ -0.96
LDB3-202ENST00000361373 DEFB116Q30KQ4 102 aa9.06□□□□□ -0.96
LDB3-202ENST00000361373 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
LDB3-202ENST00000361373 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
LDB3-202ENST00000361373 LOC110117498A0A087WWA1 95 aa9.05□□□□□ -0.96
LDB3-202ENST00000361373 GIG44P09565 113 aaPredicted RBP9.05□□□□□ -0.96
LDB3-202ENST00000361373 VPREB1P12018 145 aa9.05□□□□□ -0.96
LDB3-202ENST00000361373 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
LDB3-202ENST00000361373 TM2D3Q9BRN9 247 aa9.04□□□□□ -0.96
LDB3-202ENST00000361373 KRTAP1-1Q07627 177 aa9.04□□□□□ -0.96
LDB3-202ENST00000361373 IGLV6-57P01721 117 aa9.03□□□□□ -0.96
LDB3-202ENST00000361373 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
LDB3-202ENST00000361373 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
LDB3-202ENST00000361373 LINC00476Q8WZB0 136 aa9.03□□□□□ -0.96
LDB3-202ENST00000361373 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
LDB3-202ENST00000361373 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
LDB3-202ENST00000361373 LITAFQ99732 161 aa9.02□□□□□ -0.97
LDB3-202ENST00000361373 USP24Q9UPU5 2620 aa9.02□□□□□ -0.97
LDB3-202ENST00000361373 PCOTHQ58A44 107 aa9.02□□□□□ -0.97
LDB3-202ENST00000361373 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
LDB3-202ENST00000361373 Q6ZQT0 140 aa9.01□□□□□ -0.97
LDB3-202ENST00000361373 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
LDB3-202ENST00000361373 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
LDB3-202ENST00000361373 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
LDB3-202ENST00000361373 CDIP1Q9H305 208 aa8.99□□□□□ -0.97
LDB3-202ENST00000361373 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
LDB3-202ENST00000361373 SMCPP49901 116 aaPredicted RBP8.98□□□□□ -0.97
LDB3-202ENST00000361373 TRBV7-4A0A0J9YYF1 115 aa8.98□□□□□ -0.97
LDB3-202ENST00000361373 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
LDB3-202ENST00000361373 RETNLBQ9BQ08 111 aa8.98□□□□□ -0.97
LDB3-202ENST00000361373 H3BPC8 53 aa8.97□□□□□ -0.97
LDB3-202ENST00000361373 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
LDB3-202ENST00000361373 FLNAP21333 2647 aaKnown RBP8.97□□□□□ -0.97
LDB3-202ENST00000361373 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
LDB3-202ENST00000361373 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
LDB3-202ENST00000361373 ST20-AS1Q8NBB2 130 aa8.95□□□□□ -0.98
LDB3-202ENST00000361373 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
LDB3-202ENST00000361373 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
LDB3-202ENST00000361373 DNAH12Q6ZR08 3092 aa8.94□□□□□ -0.98
LDB3-202ENST00000361373 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
LDB3-202ENST00000361373 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
LDB3-202ENST00000361373 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
LDB3-202ENST00000361373 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
LDB3-202ENST00000361373 ITPR3Q14573 2671 aa8.93□□□□□ -0.98
LDB3-202ENST00000361373 LINC00313P59037 77 aa8.93□□□□□ -0.98
LDB3-202ENST00000361373 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
LDB3-202ENST00000361373 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
LDB3-202ENST00000361373 ATRQ13535 2644 aa8.92□□□□□ -0.98
LDB3-202ENST00000361373 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
LDB3-202ENST00000361373 A0A087WTM6 91 aa8.91□□□□□ -0.98
LDB3-202ENST00000361373 MAST4O15021 2626 aa8.91□□□□□ -0.98
LDB3-202ENST00000361373 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.98
LDB3-202ENST00000361373 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
LDB3-202ENST00000361373 SPINK1P00995 79 aa8.89□□□□□ -0.99
LDB3-202ENST00000361373 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
LDB3-202ENST00000361373 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
LDB3-202ENST00000361373 ZNF861PO60384 105 aa8.88□□□□□ -0.99
LDB3-202ENST00000361373 ACYP2P14621 99 aa8.87□□□□□ -0.99
LDB3-202ENST00000361373 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms