RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 PTPRSQ13332 1948 aa13.98□□□□□ -0.17
SMURF1-202ENST00000361368 ELOF1P60002 83 aaKnown RBP13.98□□□□□ -0.17
SMURF1-202ENST00000361368 JMJD1CQ15652 2540 aa13.96□□□□□ -0.17
SMURF1-202ENST00000361368 IGLV5-45A0A087WSX0 123 aa13.96□□□□□ -0.18
SMURF1-202ENST00000361368 BCE1O60756 84 aa13.95□□□□□ -0.18
SMURF1-202ENST00000361368 H3BPC8 53 aa13.95□□□□□ -0.18
SMURF1-202ENST00000361368 LINC00313P59037 77 aa13.95□□□□□ -0.18
SMURF1-202ENST00000361368 AGRNO00468 2067 aa13.95□□□□□ -0.18
SMURF1-202ENST00000361368 PHF5AQ7RTV0 110 aaKnown RBP13.94□□□□□ -0.18
SMURF1-202ENST00000361368 WWC2-AS2Q96NR7 200 aa13.94□□□□□ -0.18
SMURF1-202ENST00000361368 PLA2G1BP04054 148 aaKnown RBP13.94□□□□□ -0.18
SMURF1-202ENST00000361368 Q6ZRX8 168 aa13.94□□□□□ -0.18
SMURF1-202ENST00000361368 EPM2AB3EWF7 344 aa13.91□□□□□ -0.18
SMURF1-202ENST00000361368 LINC00476Q8WZB0 136 aa13.9□□□□□ -0.18
SMURF1-202ENST00000361368 CPAMD8Q8IZJ3 1885 aa13.89□□□□□ -0.19
SMURF1-202ENST00000361368 ATP11AUNQ6ZP68 121 aa13.88□□□□□ -0.19
SMURF1-202ENST00000361368 LINC00588Q9Y4M8 146 aa13.88□□□□□ -0.19
SMURF1-202ENST00000361368 GVQW2A0A096LPI5 108 aaPredicted RBP13.87□□□□□ -0.19
SMURF1-202ENST00000361368 J3QL48 77 aa13.86□□□□□ -0.19
SMURF1-202ENST00000361368 Q9UF83 564 aa13.86□□□□□ -0.19
SMURF1-202ENST00000361368 Q8NAQ8 132 aa13.85□□□□□ -0.19
SMURF1-202ENST00000361368 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
SMURF1-202ENST00000361368 LRRK2Q5S007 2527 aa13.85□□□□□ -0.19
SMURF1-202ENST00000361368 ABCA12Q86UK0 2595 aa13.84□□□□□ -0.19
SMURF1-202ENST00000361368 LOC110117498A0A087WWA1 95 aa13.84□□□□□ -0.19
SMURF1-202ENST00000361368 TET2Q6N021 2002 aaPredicted RBP13.82□□□□□ -0.2
SMURF1-202ENST00000361368 C8orf87E5RJ46 101 aa13.82□□□□□ -0.2
SMURF1-202ENST00000361368 TRAV22A0A0B4J277 110 aa13.81□□□□□ -0.2
SMURF1-202ENST00000361368 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
SMURF1-202ENST00000361368 ZFYVE26Q68DK2 2539 aa13.81□□□□□ -0.2
SMURF1-202ENST00000361368 SPAG11AQ6PDA7 123 aa13.8□□□□□ -0.2
SMURF1-202ENST00000361368 Q6ZQT0 140 aa13.8□□□□□ -0.2
SMURF1-202ENST00000361368 RPL37AP61513 92 aaKnown RBP13.8□□□□□ -0.2
SMURF1-202ENST00000361368 Q96NJ1 140 aa13.79□□□□□ -0.2
SMURF1-202ENST00000361368 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
SMURF1-202ENST00000361368 CDIP1Q9H305 208 aa13.76□□□□□ -0.21
SMURF1-202ENST00000361368 LOC101927531A0A1B0GV80 90 aa13.76□□□□□ -0.21
SMURF1-202ENST00000361368 FAM218AQ96MZ4 157 aa13.75□□□□□ -0.21
SMURF1-202ENST00000361368 ST20-AS1Q8NBB2 130 aa13.74□□□□□ -0.21
SMURF1-202ENST00000361368 FN1P02751 2386 aaKnown RBP13.73□□□□□ -0.21
SMURF1-202ENST00000361368 TRBV7-4A0A0J9YYF1 115 aa13.73□□□□□ -0.21
SMURF1-202ENST00000361368 MUC4Q99102 2169 aa13.73□□□□□ -0.21
SMURF1-202ENST00000361368 COX6B2Q6YFQ2 88 aa13.68□□□□□ -0.22
SMURF1-202ENST00000361368 A8MWP4 228 aa13.67□□□□□ -0.22
SMURF1-202ENST00000361368 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
SMURF1-202ENST00000361368 VPREB1P12018 145 aa13.65□□□□□ -0.22
SMURF1-202ENST00000361368 KLK9Q2XQG4 91 aa13.65□□□□□ -0.22
SMURF1-202ENST00000361368 COL4A2P08572 1712 aa13.65□□□□□ -0.22
SMURF1-202ENST00000361368 MRPL34Q9BQ48 92 aaKnown RBP13.65□□□□□ -0.22
SMURF1-202ENST00000361368 PRO0628Q9UI54 55 aa13.64□□□□□ -0.23
SMURF1-202ENST00000361368 IGLV6-57P01721 117 aa13.63□□□□□ -0.23
SMURF1-202ENST00000361368 SMCPP49901 116 aaPredicted RBP13.61□□□□□ -0.23
SMURF1-202ENST00000361368 TLN2Q9Y4G6 2542 aa13.6□□□□□ -0.23
SMURF1-202ENST00000361368 IGLV1-50A0A075B6I6 118 aa13.6□□□□□ -0.23
SMURF1-202ENST00000361368 SSBP3-AS1Q7Z2R9 100 aa13.57□□□□□ -0.24
SMURF1-202ENST00000361368 LINC00304Q8N9R0 145 aa13.57□□□□□ -0.24
SMURF1-202ENST00000361368 KCNQ1DNQ9H478 68 aa13.57□□□□□ -0.24
SMURF1-202ENST00000361368 FAM168BA1KXE4 195 aa13.56□□□□□ -0.24
SMURF1-202ENST00000361368 RPS28P62857 69 aaKnown RBP13.55□□□□□ -0.24
SMURF1-202ENST00000361368 PTPRBP23467 1997 aa13.55□□□□□ -0.24
SMURF1-202ENST00000361368 IGLV8-61A0A075B6I0 122 aa13.55□□□□□ -0.24
SMURF1-202ENST00000361368 PRO0461Q9UI25 63 aa13.55□□□□□ -0.24
SMURF1-202ENST00000361368 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
SMURF1-202ENST00000361368 SERTAD4-AS1Q5TG53 156 aa13.53□□□□□ -0.24
SMURF1-202ENST00000361368 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
SMURF1-202ENST00000361368 K7EIL1 84 aa13.53□□□□□ -0.24
SMURF1-202ENST00000361368 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
SMURF1-202ENST00000361368 ZNF861PO60384 105 aa13.51□□□□□ -0.25
SMURF1-202ENST00000361368 CSNK1G2-AS1Q8NCQ2 148 aa13.5□□□□□ -0.25
SMURF1-202ENST00000361368 LINC01600Q96MT4 127 aa13.5□□□□□ -0.25
SMURF1-202ENST00000361368 C19orf73Q9NVV2 129 aa13.5□□□□□ -0.25
SMURF1-202ENST00000361368 ERC2-IT1O76042 136 aa13.49□□□□□ -0.25
SMURF1-202ENST00000361368 K7EQZ3 153 aa13.49□□□□□ -0.25
SMURF1-202ENST00000361368 LITAFQ99732 161 aa13.48□□□□□ -0.25
SMURF1-202ENST00000361368 SPINT4Q6UDR6 99 aa13.48□□□□□ -0.25
SMURF1-202ENST00000361368 COL27A1Q8IZC6 1860 aaPredicted RBP13.46□□□□□ -0.25
SMURF1-202ENST00000361368 KRTAP10-11P60412 298 aa13.46□□□□□ -0.25
SMURF1-202ENST00000361368 LINC00528Q8N1L1 170 aa13.46□□□□□ -0.25
SMURF1-202ENST00000361368 LINC00336Q6ZUF6 198 aa13.46□□□□□ -0.26
SMURF1-202ENST00000361368 C8orf17Q9NRJ1 99 aa13.45□□□□□ -0.26
SMURF1-202ENST00000361368 DSCR10P59022 87 aa13.45□□□□□ -0.26
SMURF1-202ENST00000361368 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
SMURF1-202ENST00000361368 IGFL1Q6UW32 110 aa13.44□□□□□ -0.26
SMURF1-202ENST00000361368 A0A087WTM6 91 aa13.44□□□□□ -0.26
SMURF1-202ENST00000361368 ANKRD11Q6UB99 2663 aaPredicted RBP13.44□□□□□ -0.26
SMURF1-202ENST00000361368 PKD1L2Q7Z442 2459 aa13.44□□□□□ -0.26
SMURF1-202ENST00000361368 UQCR11O14957 56 aa13.43□□□□□ -0.26
SMURF1-202ENST00000361368 COA5Q86WW8 74 aa13.43□□□□□ -0.26
SMURF1-202ENST00000361368 USP9YO00507 2555 aaPredicted RBP13.43□□□□□ -0.26
SMURF1-202ENST00000361368 A0A1B0GVX0 72 aa13.41□□□□□ -0.26
SMURF1-202ENST00000361368 PRR15Q8IV56 129 aa13.41□□□□□ -0.26
SMURF1-202ENST00000361368 SETD2Q9BYW2 2564 aaPredicted RBP13.41□□□□□ -0.26
SMURF1-202ENST00000361368 CYP4F30PQ9H0H9 118 aa13.4□□□□□ -0.26
SMURF1-202ENST00000361368 C15orf56Q8N910 161 aa13.39□□□□□ -0.27
SMURF1-202ENST00000361368 OBSCN-AS1Q96MR7 158 aa13.39□□□□□ -0.27
SMURF1-202ENST00000361368 PLA2G2DQ9UNK4 145 aa13.39□□□□□ -0.27
SMURF1-202ENST00000361368 C9orf163Q8N9P6 203 aa13.38□□□□□ -0.27
SMURF1-202ENST00000361368 TLX1NBP0CAT3 122 aa13.38□□□□□ -0.27
SMURF1-202ENST00000361368 RBM12B-AS1Q9P1G2 102 aa13.37□□□□□ -0.27
SMURF1-202ENST00000361368 CRIPTQ9P021 101 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms