RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CEP192Q8TEP8 1941 aa9.27□□□□□ -0.93
CCDC144A-203ENST00000360495 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
CCDC144A-203ENST00000360495 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
CCDC144A-203ENST00000360495 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
CCDC144A-203ENST00000360495 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
CCDC144A-203ENST00000360495 LITAFQ99732 161 aa9.25□□□□□ -0.93
CCDC144A-203ENST00000360495 ZNF462Q96JM2 2506 aa9.25□□□□□ -0.93
CCDC144A-203ENST00000360495 EXPH5Q8NEV8 1989 aa9.24□□□□□ -0.93
CCDC144A-203ENST00000360495 NUPR2A6NF83 97 aa9.23□□□□□ -0.93
CCDC144A-203ENST00000360495 COA5Q86WW8 74 aa9.23□□□□□ -0.93
CCDC144A-203ENST00000360495 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
CCDC144A-203ENST00000360495 MOBPQ13875 183 aa9.21□□□□□ -0.93
CCDC144A-203ENST00000360495 Q6ZRX8 168 aa9.21□□□□□ -0.94
CCDC144A-203ENST00000360495 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.94
CCDC144A-203ENST00000360495 MUC22E2RYF6 1773 aaPredicted RBP9.2□□□□□ -0.94
CCDC144A-203ENST00000360495 KLKP1Q107X0 134 aa9.2□□□□□ -0.94
CCDC144A-203ENST00000360495 MDFIQ99750 246 aa9.2□□□□□ -0.94
CCDC144A-203ENST00000360495 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
CCDC144A-203ENST00000360495 LRP4O75096 1905 aa9.19□□□□□ -0.94
CCDC144A-203ENST00000360495 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
CCDC144A-203ENST00000360495 PTPRSQ13332 1948 aa9.18□□□□□ -0.94
CCDC144A-203ENST00000360495 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
CCDC144A-203ENST00000360495 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
CCDC144A-203ENST00000360495 RAI1Q7Z5J4 1906 aaPredicted RBP9.17□□□□□ -0.94
CCDC144A-203ENST00000360495 K7EQZ3 153 aa9.17□□□□□ -0.94
CCDC144A-203ENST00000360495 KTN1-AS1Q86SY8 53 aa9.17□□□□□ -0.94
CCDC144A-203ENST00000360495 TET2Q6N021 2002 aaPredicted RBP9.17□□□□□ -0.94
CCDC144A-203ENST00000360495 A0A1W2PPR1 153 aa9.16□□□□□ -0.94
CCDC144A-203ENST00000360495 C10orf142B7Z368 130 aa9.16□□□□□ -0.94
CCDC144A-203ENST00000360495 C16orf95Q9H693 158 aa9.16□□□□□ -0.94
CCDC144A-203ENST00000360495 CPAMD8Q8IZJ3 1885 aa9.16□□□□□ -0.94
CCDC144A-203ENST00000360495 PIEZO2Q9H5I5 2752 aa9.16□□□□□ -0.94
CCDC144A-203ENST00000360495 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
CCDC144A-203ENST00000360495 H7BZZ5 65 aa9.15□□□□□ -0.94
CCDC144A-203ENST00000360495 ADAMTS20P59510 1910 aa9.15□□□□□ -0.94
CCDC144A-203ENST00000360495 PIEZO1Q92508 2521 aa9.15□□□□□ -0.94
CCDC144A-203ENST00000360495 UQCR11O14957 56 aa9.15□□□□□ -0.95
CCDC144A-203ENST00000360495 SMR3AQ99954 134 aa9.13□□□□□ -0.95
CCDC144A-203ENST00000360495 LCA10Q71F78 164 aa9.12□□□□□ -0.95
CCDC144A-203ENST00000360495 FN1P02751 2386 aaKnown RBP9.12□□□□□ -0.95
CCDC144A-203ENST00000360495 A8MWP4 228 aa9.12□□□□□ -0.95
CCDC144A-203ENST00000360495 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
CCDC144A-203ENST00000360495 LINC00313P59037 77 aa9.12□□□□□ -0.95
CCDC144A-203ENST00000360495 KRTAP10-9P60411 292 aa9.11□□□□□ -0.95
CCDC144A-203ENST00000360495 IGLV6-57P01721 117 aa9.1□□□□□ -0.95
CCDC144A-203ENST00000360495 EPM2AB3EWF7 344 aa9.09□□□□□ -0.95
CCDC144A-203ENST00000360495 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
CCDC144A-203ENST00000360495 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.96
CCDC144A-203ENST00000360495 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
CCDC144A-203ENST00000360495 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
CCDC144A-203ENST00000360495 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
CCDC144A-203ENST00000360495 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
CCDC144A-203ENST00000360495 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
CCDC144A-203ENST00000360495 Q6ZRP5 223 aa9.03□□□□□ -0.96
CCDC144A-203ENST00000360495 PTPRBP23467 1997 aa9.01□□□□□ -0.97
CCDC144A-203ENST00000360495 IGF2RP11717 2491 aa9.01□□□□□ -0.97
CCDC144A-203ENST00000360495 PRR15Q8IV56 129 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 NCOR2Q9Y618 2525 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 CRIPTQ9P021 101 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 WIPF1O43516 503 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 C16orf90A8MZG2 172 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 H3BNG1 76 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
CCDC144A-203ENST00000360495 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
CCDC144A-203ENST00000360495 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
CCDC144A-203ENST00000360495 Q96NJ1 140 aa8.98□□□□□ -0.97
CCDC144A-203ENST00000360495 TLN1Q9Y490 2541 aaKnown RBP8.97□□□□□ -0.97
CCDC144A-203ENST00000360495 ABCA12Q86UK0 2595 aa8.97□□□□□ -0.97
CCDC144A-203ENST00000360495 IGFL1Q6UW32 110 aa8.97□□□□□ -0.97
CCDC144A-203ENST00000360495 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
CCDC144A-203ENST00000360495 JMJD1CQ15652 2540 aa8.96□□□□□ -0.98
CCDC144A-203ENST00000360495 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
CCDC144A-203ENST00000360495 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.98
CCDC144A-203ENST00000360495 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
CCDC144A-203ENST00000360495 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
CCDC144A-203ENST00000360495 USP9XQ93008 2570 aaPredicted RBP8.95□□□□□ -0.98
CCDC144A-203ENST00000360495 SETD2Q9BYW2 2564 aaPredicted RBP8.95□□□□□ -0.98
CCDC144A-203ENST00000360495 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
CCDC144A-203ENST00000360495 IGLV1-50A0A075B6I6 118 aa8.94□□□□□ -0.98
CCDC144A-203ENST00000360495 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
CCDC144A-203ENST00000360495 Q8N377 158 aa8.91□□□□□ -0.98
CCDC144A-203ENST00000360495 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
CCDC144A-203ENST00000360495 EP400Q96L91 3159 aa8.9□□□□□ -0.98
CCDC144A-203ENST00000360495 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.99
CCDC144A-203ENST00000360495 WDR87Q6ZQQ6 2873 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 A0A1B0GVX0 72 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 DSCR10P59022 87 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 Q8NAQ8 132 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 F8P00451 2351 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 RTL8CO15255 209 aa8.88□□□□□ -0.99
CCDC144A-203ENST00000360495 KLK9Q2XQG4 91 aa8.87□□□□□ -0.99
CCDC144A-203ENST00000360495 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
CCDC144A-203ENST00000360495 A0A0G2JQZ4 141 aa8.87□□□□□ -0.99
CCDC144A-203ENST00000360495 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
CCDC144A-203ENST00000360495 Q1T7F1 81 aa8.87□□□□□ -0.99
CCDC144A-203ENST00000360495 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
CCDC144A-203ENST00000360495 OBSCN-AS1Q96MR7 158 aa8.83□□□□□ -1
CCDC144A-203ENST00000360495 LRRK2Q5S007 2527 aa8.83□□□□□ -1
CCDC144A-203ENST00000360495 ZFYVE26Q68DK2 2539 aa8.83□□□□□ -1
CCDC144A-203ENST00000360495 SRCAPQ6ZRS2 3230 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms