RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 SS18L2Q9UHA2 77 aa9.8□□□□□ -0.84
SIRPA-202ENST00000358771 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
SIRPA-202ENST00000358771 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
SIRPA-202ENST00000358771 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
SIRPA-202ENST00000358771 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
SIRPA-202ENST00000358771 LINC00643Q86TS7 51 aa9.79□□□□□ -0.84
SIRPA-202ENST00000358771 JMJD7-PLA2G4BH0Y9G9 81 aa9.78□□□□□ -0.84
SIRPA-202ENST00000358771 SYCNQ0VAF6 134 aa9.77□□□□□ -0.84
SIRPA-202ENST00000358771 COX7BP24311 80 aa9.77□□□□□ -0.85
SIRPA-202ENST00000358771 RMI2Q96E14 147 aa9.77□□□□□ -0.85
SIRPA-202ENST00000358771 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
SIRPA-202ENST00000358771 UBE2BP63146 152 aa9.76□□□□□ -0.85
SIRPA-202ENST00000358771 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
SIRPA-202ENST00000358771 COX17Q14061 63 aa9.75□□□□□ -0.85
SIRPA-202ENST00000358771 BAHCC1Q9P281 2608 aa9.75□□□□□ -0.85
SIRPA-202ENST00000358771 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
SIRPA-202ENST00000358771 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.74□□□□□ -0.85
SIRPA-202ENST00000358771 A0A1B0GX51 115 aa9.73□□□□□ -0.85
SIRPA-202ENST00000358771 ESRGQ1W209 222 aa9.73□□□□□ -0.85
SIRPA-202ENST00000358771 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
SIRPA-202ENST00000358771 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
SIRPA-202ENST00000358771 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
SIRPA-202ENST00000358771 Q8N814 137 aa9.72□□□□□ -0.85
SIRPA-202ENST00000358771 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
SIRPA-202ENST00000358771 Q6ZRU5 148 aa9.71□□□□□ -0.85
SIRPA-202ENST00000358771 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.86
SIRPA-202ENST00000358771 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
SIRPA-202ENST00000358771 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
SIRPA-202ENST00000358771 ENHOQ6UWT2 76 aa9.7□□□□□ -0.86
SIRPA-202ENST00000358771 VWFP04275 2813 aa9.7□□□□□ -0.86
SIRPA-202ENST00000358771 F8WEM9 126 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 CCDC179H3BU77 68 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 TENM1Q9UKZ4 2725 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
SIRPA-202ENST00000358771 A0A087WVE0 104 aa9.68□□□□□ -0.86
SIRPA-202ENST00000358771 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
SIRPA-202ENST00000358771 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
SIRPA-202ENST00000358771 C6orf48Q9UBA6 75 aa9.68□□□□□ -0.86
SIRPA-202ENST00000358771 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
SIRPA-202ENST00000358771 M0QXV9 152 aa9.66□□□□□ -0.86
SIRPA-202ENST00000358771 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
SIRPA-202ENST00000358771 NDUFC2O95298 119 aa9.65□□□□□ -0.86
SIRPA-202ENST00000358771 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.86
SIRPA-202ENST00000358771 M0R378 163 aa9.65□□□□□ -0.86
SIRPA-202ENST00000358771 HIGD2AQ9BW72 106 aa9.65□□□□□ -0.86
SIRPA-202ENST00000358771 KIAA0087Q14695 138 aa9.64□□□□□ -0.87
SIRPA-202ENST00000358771 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
SIRPA-202ENST00000358771 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
SIRPA-202ENST00000358771 C3orf84H3BNL1 204 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 ATOX1O00244 68 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 NREPQ16612 68 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 M0R2N4 97 aa9.62□□□□□ -0.87
SIRPA-202ENST00000358771 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
SIRPA-202ENST00000358771 CCKP06307 115 aa9.61□□□□□ -0.87
SIRPA-202ENST00000358771 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
SIRPA-202ENST00000358771 KMT2BQ9UMN6 2715 aaPredicted RBP9.61□□□□□ -0.87
SIRPA-202ENST00000358771 A0A096LNI7 61 aa9.61□□□□□ -0.87
SIRPA-202ENST00000358771 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
SIRPA-202ENST00000358771 PDZD2O15018 2839 aa9.59□□□□□ -0.87
SIRPA-202ENST00000358771 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
SIRPA-202ENST00000358771 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
SIRPA-202ENST00000358771 Q6Q795 121 aa9.56□□□□□ -0.88
SIRPA-202ENST00000358771 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
SIRPA-202ENST00000358771 IMUPQ9GZP8 106 aa9.56□□□□□ -0.88
SIRPA-202ENST00000358771 MUC7Q8TAX7 377 aa9.56□□□□□ -0.88
SIRPA-202ENST00000358771 STAB2Q8WWQ8 2551 aa9.55□□□□□ -0.88
SIRPA-202ENST00000358771 SMCR5Q8TEV8 140 aa9.55□□□□□ -0.88
SIRPA-202ENST00000358771 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
SIRPA-202ENST00000358771 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
SIRPA-202ENST00000358771 PDE6GP18545 87 aa9.54□□□□□ -0.88
SIRPA-202ENST00000358771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
SIRPA-202ENST00000358771 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
SIRPA-202ENST00000358771 C2orf48Q96LS8 159 aa9.53□□□□□ -0.88
SIRPA-202ENST00000358771 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
SIRPA-202ENST00000358771 LINC00588Q9Y4M8 146 aa9.53□□□□□ -0.88
SIRPA-202ENST00000358771 UBE2AP49459 152 aa9.52□□□□□ -0.89
SIRPA-202ENST00000358771 Q6ZRP5 223 aa9.52□□□□□ -0.89
SIRPA-202ENST00000358771 UQCRQO14949 82 aa9.52□□□□□ -0.89
SIRPA-202ENST00000358771 H3BQ85 93 aa9.51□□□□□ -0.89
SIRPA-202ENST00000358771 BPY2O14599 106 aa9.51□□□□□ -0.89
SIRPA-202ENST00000358771 Q6JHZ5 121 aa9.51□□□□□ -0.89
SIRPA-202ENST00000358771 H3BNG1 76 aa9.5□□□□□ -0.89
SIRPA-202ENST00000358771 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
SIRPA-202ENST00000358771 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
SIRPA-202ENST00000358771 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
SIRPA-202ENST00000358771 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
SIRPA-202ENST00000358771 K7EIL1 84 aa9.47□□□□□ -0.89
SIRPA-202ENST00000358771 C15orf56Q8N910 161 aa9.47□□□□□ -0.89
SIRPA-202ENST00000358771 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
SIRPA-202ENST00000358771 FAM168BA1KXE4 195 aa9.46□□□□□ -0.89
SIRPA-202ENST00000358771 VPREB1P12018 145 aa9.46□□□□□ -0.89
SIRPA-202ENST00000358771 Q8NDZ9 215 aa9.46□□□□□ -0.9
SIRPA-202ENST00000358771 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
SIRPA-202ENST00000358771 COX7CP15954 63 aa9.45□□□□□ -0.9
SIRPA-202ENST00000358771 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
SIRPA-202ENST00000358771 CASC10Q5T4H9 136 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms