RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TACC2O95359 2948 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 H3BPC8 53 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 PCOTHQ58A44 107 aa4.34□□□□□ -1.71
VPS13B-203ENST00000358544 LOC100131303A0A0U1RQF7 123 aa4.34□□□□□ -1.72
VPS13B-203ENST00000358544 CD164Q04900 197 aa4.34□□□□□ -1.72
VPS13B-203ENST00000358544 PRM2P04554 102 aa4.34□□□□□ -1.72
VPS13B-203ENST00000358544 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.72
VPS13B-203ENST00000358544 SMIM29Q86T20 159 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 KPRPQ5T749 579 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-203ENST00000358544 LINC00482Q8N8I6 264 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-203ENST00000358544 Q96MF0 132 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 H0Y9P7 68 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 PLA2G2CQ5R387 149 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 Q6ZSN1 163 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 Q6ZQT0 140 aa4.33□□□□□ -1.72
VPS13B-203ENST00000358544 BRI3O95415 125 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 UTRNP46939 3433 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 C1orf64Q8NEQ6 169 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 IGHV4-30-4P0DP06 118 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
VPS13B-203ENST00000358544 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
VPS13B-203ENST00000358544 C10orf99Q6UWK7 81 aa4.31□□□□□ -1.72
VPS13B-203ENST00000358544 FBXL19-AS1Q494R0 122 aa4.31□□□□□ -1.72
VPS13B-203ENST00000358544 EGFEM1PQ0D2K5 195 aa4.31□□□□□ -1.72
VPS13B-203ENST00000358544 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
VPS13B-203ENST00000358544 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
VPS13B-203ENST00000358544 C9orf66Q5T8R8 295 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 IGKV2-28A0A075B6P5 120 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 IGKV2D-28P01615 120 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 LINC00315P59091 139 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 IGLV4-60A0A075B6I1 120 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 A0A096LNI7 61 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 IGLV1-40P01703 118 aa4.3□□□□□ -1.72
VPS13B-203ENST00000358544 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-203ENST00000358544 Q9UF83 564 aa4.29□□□□□ -1.72
VPS13B-203ENST00000358544 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
VPS13B-203ENST00000358544 H7BZZ5 65 aa4.29□□□□□ -1.72
VPS13B-203ENST00000358544 C4orf48Q5BLP8 95 aa4.29□□□□□ -1.72
VPS13B-203ENST00000358544 TRIOO75962 3097 aa4.29□□□□□ -1.72
VPS13B-203ENST00000358544 SRCAPQ6ZRS2 3230 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 A8MTW9 85 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 C2orf48Q96LS8 159 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 LELP1Q5T871 98 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 ADORA2A-AS1P86434 159 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 A8MUN3 132 aa4.28□□□□□ -1.72
VPS13B-203ENST00000358544 VWFP04275 2813 aa4.28□□□□□ -1.73
VPS13B-203ENST00000358544 A0A1B0GUV1 79 aa4.27□□□□□ -1.73
VPS13B-203ENST00000358544 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
VPS13B-203ENST00000358544 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
VPS13B-203ENST00000358544 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
VPS13B-203ENST00000358544 C6orf223Q8N319 242 aa4.27□□□□□ -1.73
VPS13B-203ENST00000358544 MGAQ8IWI9 3026 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 C11orf72Q8NBR9 251 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 LAMA2P24043 3122 aaKnown RBP4.26□□□□□ -1.73
VPS13B-203ENST00000358544 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 FRYQ5TBA9 3013 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 C10orf142B7Z368 130 aa4.26□□□□□ -1.73
VPS13B-203ENST00000358544 ZZEF1O43149 2961 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 DEFB116Q30KQ4 102 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 Q6YL49 198 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 Q5XG85 94 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 SPAG11AQ6PDA7 123 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 Q8NA96 180 aa4.25□□□□□ -1.73
VPS13B-203ENST00000358544 A0A087WSZ3 146 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 IGHV3OR16-9A0A0B4J2B5 98 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 Q9BRP9 147 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 TNRC18O15417 2968 aaPredicted RBP4.24□□□□□ -1.73
VPS13B-203ENST00000358544 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 ODF3L2Q3SX64 289 aa4.24□□□□□ -1.73
VPS13B-203ENST00000358544 ELOF1P60002 83 aaKnown RBP4.23□□□□□ -1.73
VPS13B-203ENST00000358544 PCNTO95613 3336 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 EIF4EBP3O60516 100 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-203ENST00000358544 RETNLBQ9BQ08 111 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 ZNF702PQ9H963 129 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 LY6G6DO95868 133 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 C11orf71Q6IPW1 123 aa4.23□□□□□ -1.73
VPS13B-203ENST00000358544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
VPS13B-203ENST00000358544 REG3GQ6UW15 175 aa4.22□□□□□ -1.73
VPS13B-203ENST00000358544 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
VPS13B-203ENST00000358544 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
VPS13B-203ENST00000358544 DMXL2Q8TDJ6 3036 aa4.22□□□□□ -1.73
VPS13B-203ENST00000358544 PRUNE2Q8WUY3 3088 aa4.22□□□□□ -1.73
VPS13B-203ENST00000358544 TGP01266 2768 aa4.21□□□□□ -1.74
VPS13B-203ENST00000358544 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
VPS13B-203ENST00000358544 Q8NBF4 154 aa4.21□□□□□ -1.74
VPS13B-203ENST00000358544 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 207.4 ms