RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 REG3AQ06141 175 aa5.96□□□□□ -1.46
RFX4-202ENST00000357881 TGP01266 2768 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 VPS13CQ709C8 3753 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 IGKV3-15P01624 115 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 CRPP02741 224 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 SMIM11BQ8TCY0 68 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
RFX4-202ENST00000357881 SORL1Q92673 2214 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 TRRAPQ9Y4A5 3859 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 CLPSL1A2RUU4 121 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
RFX4-202ENST00000357881 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 IGHV4OR15-8A0A075B7B6 117 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 A0A087WW49 117 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 IGKV1-17P01599 117 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
RFX4-202ENST00000357881 RPL36AP83881 106 aaKnown RBP5.94□□□□□ -1.46
RFX4-202ENST00000357881 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
RFX4-202ENST00000357881 IGHV3-38A0A0C4DH36 116 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 DNAJC9-AS1A6NH13 148 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 IGLV1-44P01699 117 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 ROS1P08922 2347 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 TMEM167AQ8TBQ9 72 aa5.93□□□□□ -1.46
RFX4-202ENST00000357881 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
RFX4-202ENST00000357881 IGHV1-8P0DP01 117 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
RFX4-202ENST00000357881 CELA1Q9UNI1 258 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
RFX4-202ENST00000357881 PRAC2D3DTV9 90 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 PRR4Q16378 134 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 Q6ZQT0 140 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 SCXQ7RTU7 201 aa5.92□□□□□ -1.46
RFX4-202ENST00000357881 M0R2N4 97 aa5.91□□□□□ -1.46
RFX4-202ENST00000357881 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
RFX4-202ENST00000357881 K7EQD1 137 aa5.9□□□□□ -1.46
RFX4-202ENST00000357881 LMO4P61968 165 aa5.9□□□□□ -1.46
RFX4-202ENST00000357881 C20orf203Q8NBC4 194 aa5.9□□□□□ -1.46
RFX4-202ENST00000357881 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
RFX4-202ENST00000357881 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.47
RFX4-202ENST00000357881 RPL27AP46776 148 aaKnown RBP5.9□□□□□ -1.47
RFX4-202ENST00000357881 C17orf58Q2M2W7 97 aa5.9□□□□□ -1.47
RFX4-202ENST00000357881 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.47
RFX4-202ENST00000357881 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
RFX4-202ENST00000357881 LINC00315P59091 139 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
RFX4-202ENST00000357881 SRRM5B3KS81 715 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
RFX4-202ENST00000357881 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 LCE6AA0A183 80 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 FAM104AQ969W3 186 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 B9D2Q9BPU9 175 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 NOTCH1P46531 2555 aa5.88□□□□□ -1.47
RFX4-202ENST00000357881 CMYA5Q8N3K9 4069 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 CASC2Q6XLA1 102 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
RFX4-202ENST00000357881 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 TRBV6-5A0A0K0K1A5 114 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 I3L2K1 104 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 S4R3C0 116 aa5.87□□□□□ -1.47
RFX4-202ENST00000357881 TENM1Q9UKZ4 2725 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 CGB3P0DN86 165 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 CGB7P0DN87 165 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
RFX4-202ENST00000357881 IGLV2-23P01705 113 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 PROK1P58294 105 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 CDKN2A-AS1Q9UH64 79 aa5.86□□□□□ -1.47
RFX4-202ENST00000357881 MRGPRG-AS1Q2M3A8 158 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 Q8N814 137 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 IGLV1-51P01701 117 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 HIGD2BQ4VC39 106 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 LINC01006Q8NI28 216 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 KLK9Q9UKQ9 250 aa5.85□□□□□ -1.47
RFX4-202ENST00000357881 PRR9Q5T870 116 aa5.84□□□□□ -1.47
RFX4-202ENST00000357881 Q8N9L7 120 aa5.84□□□□□ -1.47
RFX4-202ENST00000357881 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
RFX4-202ENST00000357881 RYR3Q15413 4870 aa5.84□□□□□ -1.47
RFX4-202ENST00000357881 Q8NAQ8 132 aa5.83□□□□□ -1.48
RFX4-202ENST00000357881 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
RFX4-202ENST00000357881 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
RFX4-202ENST00000357881 MAP6D1Q9H9H5 199 aa5.83□□□□□ -1.48
RFX4-202ENST00000357881 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
RFX4-202ENST00000357881 IGHV3-72A0A0B4J1Y9 119 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 IGLV5-39A0A0G2JS06 123 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 Q6YL49 198 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 K7EIM0 57 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 IGHV1-46P01743 117 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 VWFP04275 2813 aa5.82□□□□□ -1.48
RFX4-202ENST00000357881 IGLV4-60A0A075B6I1 120 aa5.81□□□□□ -1.48
RFX4-202ENST00000357881 RNASE3P12724 160 aaKnown RBP5.81□□□□□ -1.48
RFX4-202ENST00000357881 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
RFX4-202ENST00000357881 IGHV3OR16-8A0A075B7F1 116 aa5.81□□□□□ -1.48
RFX4-202ENST00000357881 IGLV5-45A0A087WSX0 123 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms