RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CSNK1G2-AS1Q8NCQ2 148 aa4.71□□□□□ -1.66
RTN4-203ENST00000357376 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
RTN4-203ENST00000357376 X6R8D5 127 aa4.71□□□□□ -1.66
RTN4-203ENST00000357376 F8P00451 2351 aa4.71□□□□□ -1.66
RTN4-203ENST00000357376 MRAPQ8TCY5 172 aa4.71□□□□□ -1.66
RTN4-203ENST00000357376 ZNF73O43830 326 aaPredicted RBP4.7□□□□□ -1.66
RTN4-203ENST00000357376 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 RETNQ9HD89 108 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 SETXQ7Z333 2677 aaKnown RBP4.7□□□□□ -1.66
RTN4-203ENST00000357376 HELZ2Q9BYK8 2649 aaKnown RBP4.7□□□□□ -1.66
RTN4-203ENST00000357376 C3orf84H3BNL1 204 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 KPRPQ5T749 579 aaPredicted RBP4.7□□□□□ -1.66
RTN4-203ENST00000357376 C19orf73Q9NVV2 129 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 ETDCA0A1B0GVM5 59 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 NDUFC2O95298 119 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
RTN4-203ENST00000357376 UBE2BP63146 152 aa4.69□□□□□ -1.66
RTN4-203ENST00000357376 OXLD1Q5BKU9 147 aa4.69□□□□□ -1.66
RTN4-203ENST00000357376 PDE6GP18545 87 aa4.69□□□□□ -1.66
RTN4-203ENST00000357376 TMEM258P61165 79 aa4.69□□□□□ -1.66
RTN4-203ENST00000357376 F8WEM9 126 aa4.69□□□□□ -1.66
RTN4-203ENST00000357376 WFDC10BQ8IUB3 73 aa4.68□□□□□ -1.66
RTN4-203ENST00000357376 PSCAO43653 123 aa4.68□□□□□ -1.66
RTN4-203ENST00000357376 FUSP35637 526 aaKnown RBP eCLIP4.68□□□□□ -1.661e-8■□□□□ 8.2
RTN4-203ENST00000357376 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
RTN4-203ENST00000357376 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
RTN4-203ENST00000357376 FAM19A5Q7Z5A7 132 aaPredicted RBP4.67□□□□□ -1.66
RTN4-203ENST00000357376 KRTAP1-3Q8IUG1 177 aa4.67□□□□□ -1.66
RTN4-203ENST00000357376 UBR5O95071 2799 aaPredicted RBP4.67□□□□□ -1.66
RTN4-203ENST00000357376 DEFB131BA0A096LNP1 70 aa4.67□□□□□ -1.66
RTN4-203ENST00000357376 LINC01600Q96MT4 127 aa4.67□□□□□ -1.66
RTN4-203ENST00000357376 CR1P17927 2039 aa4.67□□□□□ -1.66
RTN4-203ENST00000357376 UNC79Q9P2D8 2635 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 BPY2O14599 106 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 PRB2P02812 416 aaPredicted RBP4.66□□□□□ -1.66
RTN4-203ENST00000357376 SYCNQ0VAF6 134 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 Q6ZTC4 211 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 Q6ZVQ6 151 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 H3BQ85 93 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 M0R378 163 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 CRYGAP11844 174 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 LINC01561Q8N1V8 128 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 C11orf45Q8TAV5 145 aa4.66□□□□□ -1.66
RTN4-203ENST00000357376 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.66
RTN4-203ENST00000357376 LYPD5Q6UWN5 251 aa4.65□□□□□ -1.66
RTN4-203ENST00000357376 UBE2DNLQ8IWF7 75 aa4.65□□□□□ -1.66
RTN4-203ENST00000357376 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.66
RTN4-203ENST00000357376 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.65□□□□□ -1.66
RTN4-203ENST00000357376 Q6ZRU5 148 aa4.65□□□□□ -1.66
RTN4-203ENST00000357376 C6orf48Q9UBA6 75 aa4.65□□□□□ -1.66
RTN4-203ENST00000357376 KIAA0087Q14695 138 aa4.65□□□□□ -1.67
RTN4-203ENST00000357376 Q8N9L7 120 aa4.65□□□□□ -1.67
RTN4-203ENST00000357376 MUC7Q8TAX7 377 aa4.65□□□□□ -1.67
RTN4-203ENST00000357376 ITPR2Q14571 2701 aa4.65□□□□□ -1.67
RTN4-203ENST00000357376 APCP25054 2843 aa4.64□□□□□ -1.67
RTN4-203ENST00000357376 IGKV2-24A0A0C4DH68 120 aa4.64□□□□□ -1.67
RTN4-203ENST00000357376 KRTAP10-3P60369 221 aa4.64□□□□□ -1.67
RTN4-203ENST00000357376 HRCT1Q6UXD1 115 aa4.64□□□□□ -1.67
RTN4-203ENST00000357376 A0A0J9YWU9 116 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 EGFEM1PQ0D2K5 195 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 SPATA3Q8NHX4 192 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 Q6ZQT0 140 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 TRAV7A0A075B6U4 112 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 RMI2Q96E14 147 aa4.63□□□□□ -1.67
RTN4-203ENST00000357376 Q8NAQ8 132 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 MAST4O15021 2626 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 CSMD2Q7Z408 3487 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 NDUFC2-KCTD14E9PQ53 114 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 C22orf24Q9Y442 160 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 NIPBLQ6KC79 2804 aaeCLIP4.62□□□□□ -1.671e-6■■■□□ 18.2
RTN4-203ENST00000357376 HIGD2AQ9BW72 106 aa4.62□□□□□ -1.67
RTN4-203ENST00000357376 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
RTN4-203ENST00000357376 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
RTN4-203ENST00000357376 TEP1Q99973 2627 aaKnown RBP4.61□□□□□ -1.67
RTN4-203ENST00000357376 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
RTN4-203ENST00000357376 TRAV10A0A0B4J240 114 aa4.61□□□□□ -1.67
RTN4-203ENST00000357376 M0R2N4 97 aa4.61□□□□□ -1.67
RTN4-203ENST00000357376 LINC00612Q8N6U2 182 aa4.6□□□□□ -1.67
RTN4-203ENST00000357376 A0A096LNI7 61 aa4.6□□□□□ -1.67
RTN4-203ENST00000357376 IGLV6-57P01721 117 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 ESRGQ1W209 222 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 C2orf48Q96LS8 159 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 NOTCH1P46531 2555 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 Q8NDZ9 215 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 FAM30AQ9NZY2 134 aa4.59□□□□□ -1.67
RTN4-203ENST00000357376 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.59□□□□□ -1.68
RTN4-203ENST00000357376 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.68
RTN4-203ENST00000357376 OBSCN-AS1Q96MR7 158 aa4.58□□□□□ -1.68
RTN4-203ENST00000357376 ELOF1P60002 83 aaKnown RBP4.58□□□□□ -1.68
RTN4-203ENST00000357376 PRR4Q16378 134 aa4.58□□□□□ -1.68
RTN4-203ENST00000357376 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
RTN4-203ENST00000357376 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
RTN4-203ENST00000357376 C4orf26Q17RF5 130 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 TM2D3Q9BRN9 247 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 VPS13CQ709C8 3753 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 VPREB1P12018 145 aa4.57□□□□□ -1.68
RTN4-203ENST00000357376 CXCL6P80162 114 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms