RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NDUFA1O15239 70 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 LINC00158P58513 81 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 GAGE2EQ4V326 116 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 TTTY13Q9BZ97 58 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 GAGE2DQ9UEU5 116 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 TINCRA0A1B0GVN0 87 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 SMIM1B2RUZ4 78 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 HAMPP81172 84 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
LIG4-201ENST00000356922 Q8N814 137 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 ABCA13Q86UQ4 5058 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 IGKV2D-26A0A0A0MRZ7 120 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 TRAV12-1A0A0B4J245 112 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 CIRBPQ14011 172 aaKnown RBP2.61□□□□□ -1.99
LIG4-201ENST00000356922 ETDBQ3ZM63 59 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 LINC01545Q5VT33 79 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 FAM30AQ9NZY2 134 aa2.61□□□□□ -1.99
LIG4-201ENST00000356922 PCLOQ9Y6V0 5065 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 UNQ6190/PRO20217Q6UXQ8 127 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 COX7B2Q8TF08 81 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 CARD19Q96LW7 228 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 A0A1B0GWB2 263 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 OR13C6PQ8NH95 151 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 Q6ZRU5 148 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 TMEM126AQ9H061 195 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 PPDPFQ9H3Y8 114 aa2.6□□□□□ -1.99
LIG4-201ENST00000356922 HERC2O95714 4834 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 TMEM223A0PJW6 202 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 PLEKHB2Q96CS7 222 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -1.99
LIG4-201ENST00000356922 LRP1Q07954 4544 aaKnown RBP2.59□□□□□ -1.99
LIG4-201ENST00000356922 GVQW2A0A096LPI5 108 aaPredicted RBP2.59□□□□□ -1.99
LIG4-201ENST00000356922 IGLV5-39A0A0G2JS06 123 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 MYMXA0A1B0GTQ4 84 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 SRSF9Q13242 221 aaKnown RBP eCLIP2.59□□□□□ -1.99
LIG4-201ENST00000356922 NDUFA12Q9UI09 145 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 PKIGQ9Y2B9 76 aa2.59□□□□□ -1.99
LIG4-201ENST00000356922 SNCGO76070 127 aa2.59□□□□□ -2
LIG4-201ENST00000356922 MT-ATP8P03928 68 aa2.59□□□□□ -2
LIG4-201ENST00000356922 GCSHP23434 173 aa2.59□□□□□ -2
LIG4-201ENST00000356922 ZNF815PA8K554 130 aa2.58□□□□□ -2
LIG4-201ENST00000356922 CHTF8P0CG12 524 aa2.58□□□□□ -2
LIG4-201ENST00000356922 NPC2P61916 151 aa2.58□□□□□ -2
LIG4-201ENST00000356922 C6orf48Q9UBA6 75 aa2.58□□□□□ -2
LIG4-201ENST00000356922 J3QQQ9 107 aa2.58□□□□□ -2
LIG4-201ENST00000356922 COX8AP10176 69 aa2.58□□□□□ -2
LIG4-201ENST00000356922 IFITM1P13164 125 aa2.58□□□□□ -2
LIG4-201ENST00000356922 SDIM1Q6ZPB5 146 aa2.58□□□□□ -2
LIG4-201ENST00000356922 KRTAP7-1Q8IUC3 87 aa2.58□□□□□ -2
LIG4-201ENST00000356922 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
LIG4-201ENST00000356922 CXCL5P42830 114 aa2.58□□□□□ -2
LIG4-201ENST00000356922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.58□□□□□ -2
LIG4-201ENST00000356922 UBE2BP63146 152 aa2.58□□□□□ -2
LIG4-201ENST00000356922 Q6ZRP5 223 aa2.58□□□□□ -2
LIG4-201ENST00000356922 PCP2Q8IVA1 136 aa2.58□□□□□ -2
LIG4-201ENST00000356922 C9orf163Q8N9P6 203 aa2.58□□□□□ -2
LIG4-201ENST00000356922 Q8NDZ9 215 aa2.58□□□□□ -2
LIG4-201ENST00000356922 XAGE1AQ9HD64 81 aa2.58□□□□□ -2
LIG4-201ENST00000356922 FAM229AH3BQW9 127 aa2.57□□□□□ -2
LIG4-201ENST00000356922 CCDC179H3BU77 68 aa2.57□□□□□ -2
LIG4-201ENST00000356922 LCE2BO14633 110 aa2.57□□□□□ -2
LIG4-201ENST00000356922 NDUFV3P56181 108 aaKnown RBP2.57□□□□□ -2
LIG4-201ENST00000356922 CNBPP62633 177 aaKnown RBP2.57□□□□□ -2
LIG4-201ENST00000356922 NKAPP1Q8N9T2 125 aa2.57□□□□□ -2
LIG4-201ENST00000356922 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
LIG4-201ENST00000356922 Q8IZM0 81 aa2.57□□□□□ -2
LIG4-201ENST00000356922 FAM168BA1KXE4 195 aa2.57□□□□□ -2
LIG4-201ENST00000356922 F8WDY8 70 aa2.57□□□□□ -2
LIG4-201ENST00000356922 H3BMG7 143 aa2.57□□□□□ -2
LIG4-201ENST00000356922 J3KT08 172 aa2.57□□□□□ -2
LIG4-201ENST00000356922 LEPROTO15243 131 aa2.57□□□□□ -2
LIG4-201ENST00000356922 XGP55808 180 aa2.57□□□□□ -2
LIG4-201ENST00000356922 SFTA2Q6UW10 78 aa2.57□□□□□ -2
LIG4-201ENST00000356922 DAND5Q8N907 189 aa2.57□□□□□ -2
LIG4-201ENST00000356922 A0A096LNI7 61 aa2.56□□□□□ -2
LIG4-201ENST00000356922 ADAMTSL4-AS1Q5T5F5 129 aa2.56□□□□□ -2
LIG4-201ENST00000356922 FAM19A5Q7Z5A7 132 aaPredicted RBP2.56□□□□□ -2
LIG4-201ENST00000356922 E9PLD3 99 aa2.56□□□□□ -2
LIG4-201ENST00000356922 C2orf48Q96LS8 159 aa2.56□□□□□ -2
LIG4-201ENST00000356922 HIST1H4GQ99525 98 aa2.56□□□□□ -2
LIG4-201ENST00000356922 LINC00474Q9P2X8 69 aa2.56□□□□□ -2
LIG4-201ENST00000356922 A0A1W2PNN7 141 aa2.56□□□□□ -2
LIG4-201ENST00000356922 S100A7L2Q5SY68 101 aa2.56□□□□□ -2
LIG4-201ENST00000356922 C9orf129Q5T035 196 aaKnown RBP2.56□□□□□ -2
LIG4-201ENST00000356922 C2orf91Q6ZV80 131 aa2.56□□□□□ -2
LIG4-201ENST00000356922 KRTAP11-1Q8IUC1 163 aa2.56□□□□□ -2
LIG4-201ENST00000356922 LINC01561Q8N1V8 128 aa2.56□□□□□ -2
LIG4-201ENST00000356922 PPDPFLQ8WWR9 84 aa2.56□□□□□ -2
LIG4-201ENST00000356922 NHP2Q9NX24 153 aaKnown RBP2.56□□□□□ -2
LIG4-201ENST00000356922 TRBV30A0A0K0K1B3 111 aa2.55□□□□□ -2
LIG4-201ENST00000356922 LYRM7Q5U5X0 104 aa2.55□□□□□ -2
LIG4-201ENST00000356922 C7orf33Q8WU49 177 aa2.55□□□□□ -2
LIG4-201ENST00000356922 CDIP1Q9H305 208 aa2.55□□□□□ -2
LIG4-201ENST00000356922 PRR3P79522 188 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms