RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ADAMTS20P59510 1910 aa7.73□□□□□ -1.17
GTF3C1-201ENST00000356183 TLN2Q9Y4G6 2542 aa7.73□□□□□ -1.17
GTF3C1-201ENST00000356183 SMR3AQ99954 134 aa7.72□□□□□ -1.17
GTF3C1-201ENST00000356183 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
GTF3C1-201ENST00000356183 F8WDY8 70 aa7.72□□□□□ -1.17
GTF3C1-201ENST00000356183 Q8N2B8 174 aa7.72□□□□□ -1.17
GTF3C1-201ENST00000356183 FAM19A4Q96LR4 140 aa7.72□□□□□ -1.17
GTF3C1-201ENST00000356183 A0A1B0GUV1 79 aa7.71□□□□□ -1.18
GTF3C1-201ENST00000356183 AVPP01185 164 aa7.7□□□□□ -1.18
GTF3C1-201ENST00000356183 LINC01561Q8N1V8 128 aa7.7□□□□□ -1.18
GTF3C1-201ENST00000356183 BCE1O60756 84 aa7.7□□□□□ -1.18
GTF3C1-201ENST00000356183 Q6ZQT0 140 aa7.7□□□□□ -1.18
GTF3C1-201ENST00000356183 KIF25-AS1Q9Y6Z4 181 aa7.7□□□□□ -1.18
GTF3C1-201ENST00000356183 C1orf134Q5TEV5 83 aa7.68□□□□□ -1.18
GTF3C1-201ENST00000356183 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
GTF3C1-201ENST00000356183 LINC00313P59037 77 aa7.67□□□□□ -1.18
GTF3C1-201ENST00000356183 A8MUN3 132 aa7.67□□□□□ -1.18
GTF3C1-201ENST00000356183 FN1P02751 2386 aaKnown RBP7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 CDSNQ15517 529 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 DOPEY1Q5JWR5 2465 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 ANKRD11Q6UB99 2663 aaPredicted RBP7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
GTF3C1-201ENST00000356183 PTPRBP23467 1997 aa7.65□□□□□ -1.18
GTF3C1-201ENST00000356183 FHL3Q13643 280 aa7.65□□□□□ -1.18
GTF3C1-201ENST00000356183 NHLRC4P0CG21 123 aaPredicted RBP7.65□□□□□ -1.18
GTF3C1-201ENST00000356183 LINC00476Q8WZB0 136 aa7.65□□□□□ -1.18
GTF3C1-201ENST00000356183 COA5Q86WW8 74 aa7.64□□□□□ -1.19
GTF3C1-201ENST00000356183 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
GTF3C1-201ENST00000356183 TRAV22A0A0B4J277 110 aa7.64□□□□□ -1.19
GTF3C1-201ENST00000356183 LINC00315P59091 139 aa7.64□□□□□ -1.19
GTF3C1-201ENST00000356183 APLNQ9ULZ1 77 aa7.63□□□□□ -1.19
GTF3C1-201ENST00000356183 SETD2Q9BYW2 2564 aaPredicted RBP7.63□□□□□ -1.19
GTF3C1-201ENST00000356183 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
GTF3C1-201ENST00000356183 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-201ENST00000356183 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
GTF3C1-201ENST00000356183 H3BPC8 53 aa7.62□□□□□ -1.19
GTF3C1-201ENST00000356183 ABCA12Q86UK0 2595 aa7.62□□□□□ -1.19
GTF3C1-201ENST00000356183 SPTBN4Q9H254 2564 aa7.62□□□□□ -1.19
GTF3C1-201ENST00000356183 USP9XQ93008 2570 aaPredicted RBP7.62□□□□□ -1.19
GTF3C1-201ENST00000356183 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
GTF3C1-201ENST00000356183 Q96NJ1 140 aa7.61□□□□□ -1.19
GTF3C1-201ENST00000356183 JMJD1CQ15652 2540 aa7.6□□□□□ -1.19
GTF3C1-201ENST00000356183 MUC4Q99102 2169 aa7.6□□□□□ -1.19
GTF3C1-201ENST00000356183 C5orf42Q9H799 3197 aa7.6□□□□□ -1.19
GTF3C1-201ENST00000356183 PRRC2CQ9Y520 2896 aaKnown RBP7.59□□□□□ -1.19
GTF3C1-201ENST00000356183 LRRK2Q5S007 2527 aa7.59□□□□□ -1.19
GTF3C1-201ENST00000356183 IGLV5-45A0A087WSX0 123 aa7.59□□□□□ -1.19
GTF3C1-201ENST00000356183 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
GTF3C1-201ENST00000356183 K7EQZ3 153 aa7.57□□□□□ -1.2
GTF3C1-201ENST00000356183 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
GTF3C1-201ENST00000356183 Q8NBF4 154 aa7.57□□□□□ -1.2
GTF3C1-201ENST00000356183 USP9YO00507 2555 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 TRBV7-4A0A0J9YYF1 115 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 EPM2AB3EWF7 344 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 CEP295Q9C0D2 2601 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 Q6ZRX8 168 aa7.56□□□□□ -1.2
GTF3C1-201ENST00000356183 KRTAP10-9P60411 292 aa7.55□□□□□ -1.2
GTF3C1-201ENST00000356183 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
GTF3C1-201ENST00000356183 LITAFQ99732 161 aa7.55□□□□□ -1.2
GTF3C1-201ENST00000356183 CD164Q04900 197 aa7.55□□□□□ -1.2
GTF3C1-201ENST00000356183 UQCR11O14957 56 aa7.54□□□□□ -1.2
GTF3C1-201ENST00000356183 TYMSOSQ8TAI1 123 aa7.54□□□□□ -1.2
GTF3C1-201ENST00000356183 KTN1-AS1Q86SY8 53 aa7.53□□□□□ -1.2
GTF3C1-201ENST00000356183 LINC00336Q6ZUF6 198 aa7.52□□□□□ -1.2
GTF3C1-201ENST00000356183 CHD8Q9HCK8 2581 aa7.52□□□□□ -1.21
GTF3C1-201ENST00000356183 A8MWP4 228 aa7.52□□□□□ -1.21
GTF3C1-201ENST00000356183 A0A1B0GW54 56 aa7.52□□□□□ -1.21
GTF3C1-201ENST00000356183 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
GTF3C1-201ENST00000356183 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
GTF3C1-201ENST00000356183 COL27A1Q8IZC6 1860 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-201ENST00000356183 MRPL34Q9BQ48 92 aaKnown RBP7.49□□□□□ -1.21
GTF3C1-201ENST00000356183 LCA10Q71F78 164 aa7.49□□□□□ -1.21
GTF3C1-201ENST00000356183 DSCR10P59022 87 aa7.48□□□□□ -1.21
GTF3C1-201ENST00000356183 RTL8CO15255 209 aa7.48□□□□□ -1.21
GTF3C1-201ENST00000356183 PKD1L2Q7Z442 2459 aa7.47□□□□□ -1.21
GTF3C1-201ENST00000356183 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
GTF3C1-201ENST00000356183 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.21
GTF3C1-201ENST00000356183 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
GTF3C1-201ENST00000356183 C16orf90A8MZG2 172 aa7.45□□□□□ -1.22
GTF3C1-201ENST00000356183 Q6ZRP5 223 aa7.45□□□□□ -1.22
GTF3C1-201ENST00000356183 A0A1W2PPR1 153 aa7.45□□□□□ -1.22
GTF3C1-201ENST00000356183 KLKP1Q107X0 134 aa7.45□□□□□ -1.22
GTF3C1-201ENST00000356183 ANKRD17O75179 2603 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-201ENST00000356183 A0A0D9SG42 100 aa7.43□□□□□ -1.22
GTF3C1-201ENST00000356183 WIPF1O43516 503 aa7.42□□□□□ -1.22
GTF3C1-201ENST00000356183 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
GTF3C1-201ENST00000356183 PCSK5Q92824 1860 aa7.41□□□□□ -1.22
GTF3C1-201ENST00000356183 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
GTF3C1-201ENST00000356183 MTORP42345 2549 aa7.41□□□□□ -1.22
GTF3C1-201ENST00000356183 H7BZZ5 65 aa7.4□□□□□ -1.22
GTF3C1-201ENST00000356183 ZNF462Q96JM2 2506 aa7.4□□□□□ -1.23
GTF3C1-201ENST00000356183 J3QL48 77 aa7.4□□□□□ -1.23
GTF3C1-201ENST00000356183 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.23
GTF3C1-201ENST00000356183 A0A0G2JQZ4 141 aa7.39□□□□□ -1.23
GTF3C1-201ENST00000356183 A0A1W2PNN7 141 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms