RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
CTSA-202ENST00000354880 LCE6AA0A183 80 aa10.1□□□□□ -0.79
CTSA-202ENST00000354880 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
CTSA-202ENST00000354880 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
CTSA-202ENST00000354880 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
CTSA-202ENST00000354880 PRO1854Q9UHT4 67 aa10.1□□□□□ -0.79
CTSA-202ENST00000354880 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
CTSA-202ENST00000354880 NDUFC2O95298 119 aa10.08□□□□□ -0.8
CTSA-202ENST00000354880 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
CTSA-202ENST00000354880 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
CTSA-202ENST00000354880 FAT2Q9NYQ8 4349 aa10.07□□□□□ -0.8
CTSA-202ENST00000354880 RTL8CO15255 209 aa10.07□□□□□ -0.8
CTSA-202ENST00000354880 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
CTSA-202ENST00000354880 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
CTSA-202ENST00000354880 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
CTSA-202ENST00000354880 KMT2CQ8NEZ4 4911 aaKnown RBP10.06□□□□□ -0.8
CTSA-202ENST00000354880 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 TNP2Q05952 138 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
CTSA-202ENST00000354880 Q8NDZ9 215 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 LINC00337Q8N6G1 96 aa10.05□□□□□ -0.8
CTSA-202ENST00000354880 TSPAN13O95857 204 aa10.04□□□□□ -0.8
CTSA-202ENST00000354880 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
CTSA-202ENST00000354880 PRR3P79522 188 aaKnown RBP10.04□□□□□ -0.8
CTSA-202ENST00000354880 H3BUT2 72 aa10.03□□□□□ -0.8
CTSA-202ENST00000354880 NAA38Q9BRA0 125 aaKnown RBP10.03□□□□□ -0.8
CTSA-202ENST00000354880 H7C2G1 150 aa10.03□□□□□ -0.8
CTSA-202ENST00000354880 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
CTSA-202ENST00000354880 NCR3O14931 201 aa10.02□□□□□ -0.81
CTSA-202ENST00000354880 Q1RN00 199 aa10.02□□□□□ -0.81
CTSA-202ENST00000354880 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
CTSA-202ENST00000354880 VPREB1P12018 145 aa10.01□□□□□ -0.81
CTSA-202ENST00000354880 A0A096LNI7 61 aa10□□□□□ -0.81
CTSA-202ENST00000354880 A0A1B0GV90 55 aa10□□□□□ -0.81
CTSA-202ENST00000354880 LINC01620Q4KN68 170 aa10□□□□□ -0.81
CTSA-202ENST00000354880 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
CTSA-202ENST00000354880 RYR2Q92736 4967 aa10□□□□□ -0.81
CTSA-202ENST00000354880 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
CTSA-202ENST00000354880 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
CTSA-202ENST00000354880 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
CTSA-202ENST00000354880 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
CTSA-202ENST00000354880 PLA2G2DQ9UNK4 145 aa9.99□□□□□ -0.81
CTSA-202ENST00000354880 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 TMEM126AQ9H061 195 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 PKD1P98161 4303 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 IGLV5-52A0A0A0MRZ9 124 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 FUSP35637 526 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTSA-202ENST00000354880 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
CTSA-202ENST00000354880 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
CTSA-202ENST00000354880 PSMB2P49721 201 aa9.97□□□□□ -0.81
CTSA-202ENST00000354880 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.81
CTSA-202ENST00000354880 M0R378 163 aa9.96□□□□□ -0.82
CTSA-202ENST00000354880 FABP2P12104 132 aa9.96□□□□□ -0.82
CTSA-202ENST00000354880 TRIAP1O43715 76 aa9.95□□□□□ -0.82
CTSA-202ENST00000354880 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
CTSA-202ENST00000354880 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
CTSA-202ENST00000354880 IGLV5-37A0A075B6J1 123 aa9.94□□□□□ -0.82
CTSA-202ENST00000354880 IGLV6-57P01721 117 aa9.94□□□□□ -0.82
CTSA-202ENST00000354880 VAMP3Q15836 100 aa9.94□□□□□ -0.82
CTSA-202ENST00000354880 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
CTSA-202ENST00000354880 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
CTSA-202ENST00000354880 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
CTSA-202ENST00000354880 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
CTSA-202ENST00000354880 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
CTSA-202ENST00000354880 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
CTSA-202ENST00000354880 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
CTSA-202ENST00000354880 LYRM7Q5U5X0 104 aa9.93□□□□□ -0.82
CTSA-202ENST00000354880 COX6CP09669 75 aa9.92□□□□□ -0.82
CTSA-202ENST00000354880 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
CTSA-202ENST00000354880 C22orf24Q9Y442 160 aa9.92□□□□□ -0.82
CTSA-202ENST00000354880 A0A1W2PNN7 141 aa9.91□□□□□ -0.82
CTSA-202ENST00000354880 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
CTSA-202ENST00000354880 SPCS1Q9Y6A9 102 aa9.91□□□□□ -0.82
CTSA-202ENST00000354880 GAGE10A6NGK3 116 aa9.9□□□□□ -0.82
CTSA-202ENST00000354880 PANO1I0J062 215 aa9.9□□□□□ -0.82
CTSA-202ENST00000354880 MRPL55Q7Z7F7 128 aaKnown RBP9.89□□□□□ -0.83
CTSA-202ENST00000354880 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
CTSA-202ENST00000354880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
CTSA-202ENST00000354880 M0QXV9 152 aa9.89□□□□□ -0.83
CTSA-202ENST00000354880 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
CTSA-202ENST00000354880 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
CTSA-202ENST00000354880 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
CTSA-202ENST00000354880 LINC00167Q96N53 147 aa9.88□□□□□ -0.83
CTSA-202ENST00000354880 K7EP34 96 aa9.87□□□□□ -0.83
CTSA-202ENST00000354880 GTF2H5Q6ZYL4 71 aa9.87□□□□□ -0.83
CTSA-202ENST00000354880 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
CTSA-202ENST00000354880 TRBV20-1A0A075B6N2 111 aa9.86□□□□□ -0.83
CTSA-202ENST00000354880 PKHD1P08F94 4074 aa9.86□□□□□ -0.83
CTSA-202ENST00000354880 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
CTSA-202ENST00000354880 TCL1BO95988 128 aa9.86□□□□□ -0.83
CTSA-202ENST00000354880 C6orf99Q4VX62 202 aa9.86□□□□□ -0.83
CTSA-202ENST00000354880 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
CTSA-202ENST00000354880 KCNQ1DNQ9H478 68 aa9.85□□□□□ -0.83
CTSA-202ENST00000354880 ZNF73O43830 326 aaPredicted RBP9.84□□□□□ -0.83
CTSA-202ENST00000354880 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
CTSA-202ENST00000354880 RYR3Q15413 4870 aa9.84□□□□□ -0.83
CTSA-202ENST00000354880 A0A087WYN8 130 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms