RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PCP4P48539 62 aa13.41□□□□□ -0.26
TRIM4-202ENST00000354241 Q6ZRN7 208 aaPredicted RBP13.41□□□□□ -0.26
TRIM4-202ENST00000354241 LINC00476Q8WZB0 136 aa13.41□□□□□ -0.26
TRIM4-202ENST00000354241 SPCS1Q9Y6A9 102 aa13.41□□□□□ -0.26
TRIM4-202ENST00000354241 XAGE1AQ9HD64 81 aa13.4□□□□□ -0.26
TRIM4-202ENST00000354241 Q6ZR54 194 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 TRAV13-2A0A0B4J235 113 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 PSMB2P49721 201 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 LINC00337Q8N6G1 96 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
TRIM4-202ENST00000354241 C14orf177Q52M58 125 aa13.38□□□□□ -0.27
TRIM4-202ENST00000354241 Q6ZRP5 223 aa13.37□□□□□ -0.27
TRIM4-202ENST00000354241 NDUFC2O95298 119 aa13.37□□□□□ -0.27
TRIM4-202ENST00000354241 PRR3P79522 188 aaKnown RBP13.37□□□□□ -0.27
TRIM4-202ENST00000354241 RPL18AQ02543 176 aaKnown RBP13.37□□□□□ -0.27
TRIM4-202ENST00000354241 Q8NDZ9 215 aa13.36□□□□□ -0.27
TRIM4-202ENST00000354241 LRCOL1A6NCL2 159 aa13.35□□□□□ -0.27
TRIM4-202ENST00000354241 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
TRIM4-202ENST00000354241 OR13C6PQ8NH95 151 aa13.35□□□□□ -0.27
TRIM4-202ENST00000354241 NCR3O14931 201 aa13.34□□□□□ -0.27
TRIM4-202ENST00000354241 SCGB1C2P0DMR2 95 aa13.34□□□□□ -0.27
TRIM4-202ENST00000354241 TLX1NBP0CAT3 122 aa13.33□□□□□ -0.28
TRIM4-202ENST00000354241 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
TRIM4-202ENST00000354241 TRIAP1O43715 76 aa13.33□□□□□ -0.28
TRIM4-202ENST00000354241 LYRM7Q5U5X0 104 aa13.33□□□□□ -0.28
TRIM4-202ENST00000354241 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
TRIM4-202ENST00000354241 KMT2AQ03164 3969 aa13.32□□□□□ -0.28
TRIM4-202ENST00000354241 ALMS1Q8TCU4 4167 aa13.31□□□□□ -0.28
TRIM4-202ENST00000354241 C1orf134Q5TEV5 83 aa13.3□□□□□ -0.28
TRIM4-202ENST00000354241 C9orf129Q5T035 196 aaKnown RBP13.29□□□□□ -0.28
TRIM4-202ENST00000354241 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
TRIM4-202ENST00000354241 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
TRIM4-202ENST00000354241 COX6CP09669 75 aa13.27□□□□□ -0.28
TRIM4-202ENST00000354241 DNAH6Q9C0G6 4158 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 TCL1BO95988 128 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 VPREB1P12018 145 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 S100A7L2Q5SY68 101 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 Q8N814 137 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 SMIM11BQ8TCY0 68 aa13.26□□□□□ -0.29
TRIM4-202ENST00000354241 A0A087WTM6 91 aa13.25□□□□□ -0.29
TRIM4-202ENST00000354241 F8W1H4 67 aa13.25□□□□□ -0.29
TRIM4-202ENST00000354241 TMEM126AQ9H061 195 aa13.25□□□□□ -0.29
TRIM4-202ENST00000354241 TRBV10-2A0A0K0K1G8 114 aa13.24□□□□□ -0.29
TRIM4-202ENST00000354241 H3BMG7 143 aa13.24□□□□□ -0.29
TRIM4-202ENST00000354241 RPL28P46779 137 aaKnown RBP13.24□□□□□ -0.29
TRIM4-202ENST00000354241 C21orf62-AS1Q17RA5 79 aa13.24□□□□□ -0.29
TRIM4-202ENST00000354241 TRBV20-1A0A075B6N2 111 aa13.23□□□□□ -0.29
TRIM4-202ENST00000354241 CLEC2BQ92478 149 aa13.21□□□□□ -0.29
TRIM4-202ENST00000354241 SERTAD4-AS1Q5TG53 156 aa13.21□□□□□ -0.3
TRIM4-202ENST00000354241 M0R378 163 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 C9orf163Q8N9P6 203 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 DNAH2Q9P225 4427 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 A0A096LNI7 61 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 TRBV10-3A0A0K0K1G6 114 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 IGLV6-57P01721 117 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
TRIM4-202ENST00000354241 IGKV2-24A0A0C4DH68 120 aa13.18□□□□□ -0.3
TRIM4-202ENST00000354241 PLA2G2DQ9UNK4 145 aa13.18□□□□□ -0.3
TRIM4-202ENST00000354241 C16orf90A8MZG2 172 aa13.17□□□□□ -0.3
TRIM4-202ENST00000354241 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
TRIM4-202ENST00000354241 MTURNQ8N3F0 131 aa13.15□□□□□ -0.3
TRIM4-202ENST00000354241 PRO0461Q9UI25 63 aa13.15□□□□□ -0.3
TRIM4-202ENST00000354241 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-202ENST00000354241 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
TRIM4-202ENST00000354241 LST1O00453 97 aa13.13□□□□□ -0.31
TRIM4-202ENST00000354241 FUSP35637 526 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM4-202ENST00000354241 TNP2Q05952 138 aa13.13□□□□□ -0.31
TRIM4-202ENST00000354241 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
TRIM4-202ENST00000354241 J3QR89 54 aa13.13□□□□□ -0.31
TRIM4-202ENST00000354241 IGLV5-37A0A075B6J1 123 aa13.12□□□□□ -0.31
TRIM4-202ENST00000354241 C6orf99Q4VX62 202 aa13.12□□□□□ -0.31
TRIM4-202ENST00000354241 KRTAP7-1Q8IUC3 87 aa13.12□□□□□ -0.31
TRIM4-202ENST00000354241 C7orf33Q8WU49 177 aa13.12□□□□□ -0.31
TRIM4-202ENST00000354241 H0YGX0 51 aa13.11□□□□□ -0.31
TRIM4-202ENST00000354241 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
TRIM4-202ENST00000354241 FAM218AQ96MZ4 157 aa13.11□□□□□ -0.31
TRIM4-202ENST00000354241 RTL8CO15255 209 aa13.11□□□□□ -0.31
TRIM4-202ENST00000354241 SDIM1Q6ZPB5 146 aa13.11□□□□□ -0.31
TRIM4-202ENST00000354241 C22orf24Q9Y442 160 aa13.1□□□□□ -0.31
TRIM4-202ENST00000354241 C9JAW5 83 aa13.09□□□□□ -0.31
TRIM4-202ENST00000354241 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
TRIM4-202ENST00000354241 DNAH17Q9UFH2 4485 aa13.08□□□□□ -0.32
TRIM4-202ENST00000354241 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
TRIM4-202ENST00000354241 A0A087WYN8 130 aa13.07□□□□□ -0.32
TRIM4-202ENST00000354241 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
TRIM4-202ENST00000354241 ETDBQ3ZM63 59 aa13.07□□□□□ -0.32
TRIM4-202ENST00000354241 MRPL55Q7Z7F7 128 aaKnown RBP13.07□□□□□ -0.32
TRIM4-202ENST00000354241 DIRC1Q969H9 104 aa13.07□□□□□ -0.32
TRIM4-202ENST00000354241 LCE6AA0A183 80 aa13.06□□□□□ -0.32
TRIM4-202ENST00000354241 ZNF73O43830 326 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-202ENST00000354241 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
TRIM4-202ENST00000354241 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
TRIM4-202ENST00000354241 M0QXV9 152 aa13.05□□□□□ -0.32
TRIM4-202ENST00000354241 TRACP01848 142 aa13.04□□□□□ -0.32
TRIM4-202ENST00000354241 SMCPP49901 116 aaPredicted RBP13.04□□□□□ -0.32
TRIM4-202ENST00000354241 LINC00474Q9P2X8 69 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms