RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CXCL6P80162 114 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 SETXQ7Z333 2677 aaKnown RBP5.25□□□□□ -1.57
BRCA1-201ENST00000352993 PDE6GP18545 87 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-201ENST00000352993 FAM229BQ4G0N7 80 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 C6orf223Q8N319 242 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 IL17DQ8TAD2 202 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 C4orf3Q8WVX3 66 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 F8WDY8 70 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 ESM1Q9NQ30 184 aa5.24□□□□□ -1.57
BRCA1-201ENST00000352993 CHCHD10Q8WYQ3 142 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-201ENST00000352993 PRB2P02812 416 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-201ENST00000352993 CR1P17927 2039 aa5.23□□□□□ -1.57
BRCA1-201ENST00000352993 LRRK2Q5S007 2527 aa5.23□□□□□ -1.57
BRCA1-201ENST00000352993 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
BRCA1-201ENST00000352993 Q8NDZ9 215 aa5.23□□□□□ -1.57
BRCA1-201ENST00000352993 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
BRCA1-201ENST00000352993 PRYO14603 147 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 LINC01006Q8NI28 216 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 Q6YL49 198 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 DIRC1Q969H9 104 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 ANKRD17O75179 2603 aaKnown RBP5.22□□□□□ -1.57
BRCA1-201ENST00000352993 TRBV7-4A0A0J9YYF1 115 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 COX17Q14061 63 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 ZANQ9Y493 2812 aa5.22□□□□□ -1.57
BRCA1-201ENST00000352993 SPAG11BQ08648 103 aa5.21□□□□□ -1.57
BRCA1-201ENST00000352993 ESRGQ1W209 222 aa5.21□□□□□ -1.57
BRCA1-201ENST00000352993 HIGD2AQ9BW72 106 aa5.21□□□□□ -1.57
BRCA1-201ENST00000352993 CENPEQ02224 2701 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 C3orf84H3BNL1 204 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 CCL24O00175 119 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-201ENST00000352993 CELA1Q9UNI1 258 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 IGHV4-28A0A0C4DH34 117 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 C10orf25Q5T742 122 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 CD164L2Q6UWJ8 174 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 CCDC168Q8NDH2 2452 aa5.21□□□□□ -1.58
BRCA1-201ENST00000352993 REG3AQ06141 175 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 VPS13CQ709C8 3753 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 PLAC8L1A1L4L8 177 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 COX7BP24311 80 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
BRCA1-201ENST00000352993 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
BRCA1-201ENST00000352993 ANK2Q01484 3957 aa5.19□□□□□ -1.58
BRCA1-201ENST00000352993 GIG44P09565 113 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-201ENST00000352993 PRR4Q16378 134 aa5.19□□□□□ -1.58
BRCA1-201ENST00000352993 HTN3P15516 51 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 A0A1B0GUV1 79 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 DEFB4AO15263 64 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 ZNF73O43830 326 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-201ENST00000352993 HIGD2BQ4VC39 106 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 OTOGQ6ZRI0 2925 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 CELSR2Q9HCU4 2923 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 PSPHP1O15172 72 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 C9orf66Q5T8R8 295 aa5.18□□□□□ -1.58
BRCA1-201ENST00000352993 NBEAL2Q6ZNJ1 2754 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 FBN2P35556 2912 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 H3BQ85 93 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 DSCR9P59020 149 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 PRO0255Q9UI72 69 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 KLK12Q9UKR0 248 aa5.17□□□□□ -1.58
BRCA1-201ENST00000352993 ZNF462Q96JM2 2506 aa5.16□□□□□ -1.58
BRCA1-201ENST00000352993 IGLV6-57P01721 117 aa5.16□□□□□ -1.58
BRCA1-201ENST00000352993 CMC4P56277 68 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-201ENST00000352993 ABCA12Q86UK0 2595 aa5.16□□□□□ -1.58
BRCA1-201ENST00000352993 MXRA5Q9NR99 2828 aa5.15□□□□□ -1.59
BRCA1-201ENST00000352993 IGKV4-1P06312 121 aa5.15□□□□□ -1.59
BRCA1-201ENST00000352993 ZNF469Q96JG9 3925 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-201ENST00000352993 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
BRCA1-201ENST00000352993 FLNCQ14315 2725 aa5.14□□□□□ -1.59
BRCA1-201ENST00000352993 SMIM29Q86T20 159 aa5.14□□□□□ -1.59
BRCA1-201ENST00000352993 ERC2-IT1O76042 136 aa5.14□□□□□ -1.59
BRCA1-201ENST00000352993 OCR1Q9BZK8 76 aa5.14□□□□□ -1.59
BRCA1-201ENST00000352993 TEX15Q9BXT5 2789 aa5.14□□□□□ -1.59
BRCA1-201ENST00000352993 APCP25054 2843 aa5.13□□□□□ -1.59
BRCA1-201ENST00000352993 IGHV4-31P0DP07 118 aa5.13□□□□□ -1.59
BRCA1-201ENST00000352993 Q6ZTC4 211 aa5.13□□□□□ -1.59
BRCA1-201ENST00000352993 CSNK1G2-AS1Q8NCQ2 148 aa5.12□□□□□ -1.59
BRCA1-201ENST00000352993 CAMK2N2Q96S95 79 aa5.12□□□□□ -1.59
BRCA1-201ENST00000352993 DOPEY1Q5JWR5 2465 aa5.12□□□□□ -1.59
BRCA1-201ENST00000352993 ANK3Q12955 4377 aaKnown RBP5.12□□□□□ -1.59
BRCA1-201ENST00000352993 MTORP42345 2549 aa5.12□□□□□ -1.59
BRCA1-201ENST00000352993 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
BRCA1-201ENST00000352993 UTP20O75691 2785 aaKnown RBP5.11□□□□□ -1.59
BRCA1-201ENST00000352993 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
BRCA1-201ENST00000352993 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
BRCA1-201ENST00000352993 NF1P21359 2839 aa5.1□□□□□ -1.59
BRCA1-201ENST00000352993 HIVEP2P31629 2446 aa5.1□□□□□ -1.59
BRCA1-201ENST00000352993 NIPBLQ6KC79 2804 aaeCLIP5.1□□□□□ -1.59
BRCA1-201ENST00000352993 A0A0J9YWU9 116 aa5.1□□□□□ -1.59
BRCA1-201ENST00000352993 hDV103S1A0JD37 113 aa5.1□□□□□ -1.59
BRCA1-201ENST00000352993 IGHV4-30-4P0DP06 118 aa5.1□□□□□ -1.59
BRCA1-201ENST00000352993 DNAJC9-AS1A6NH13 148 aa5.09□□□□□ -1.59
BRCA1-201ENST00000352993 DEFB135Q30KP9 77 aa5.09□□□□□ -1.59
BRCA1-201ENST00000352993 UNC79Q9P2D8 2635 aa5.09□□□□□ -1.6
BRCA1-201ENST00000352993 M0R378 163 aa5.09□□□□□ -1.6
BRCA1-201ENST00000352993 Q6ZRP5 223 aa5.09□□□□□ -1.6
BRCA1-201ENST00000352993 F8P00451 2351 aa5.08□□□□□ -1.6
BRCA1-201ENST00000352993 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms