RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 TRBV7-6A0A0J9YX20 115 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 F8WDY8 70 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 HAMPP81172 84 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 NF1P21359 2839 aa10.26□□□□□ -0.77
TRAF3-202ENST00000351691 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
TRAF3-202ENST00000351691 A0A1B0GUV1 79 aa10.25□□□□□ -0.77
TRAF3-202ENST00000351691 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
TRAF3-202ENST00000351691 MUC7Q8TAX7 377 aa10.25□□□□□ -0.77
TRAF3-202ENST00000351691 C1orf43Q9BWL3 253 aa10.25□□□□□ -0.77
TRAF3-202ENST00000351691 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
TRAF3-202ENST00000351691 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
TRAF3-202ENST00000351691 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
TRAF3-202ENST00000351691 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
TRAF3-202ENST00000351691 MIFP14174 115 aa10.23□□□□□ -0.77
TRAF3-202ENST00000351691 KIAA0087Q14695 138 aa10.22□□□□□ -0.77
TRAF3-202ENST00000351691 Q8N3U1 123 aa10.22□□□□□ -0.77
TRAF3-202ENST00000351691 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
TRAF3-202ENST00000351691 M0R2N4 97 aa10.21□□□□□ -0.78
TRAF3-202ENST00000351691 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.78
TRAF3-202ENST00000351691 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
TRAF3-202ENST00000351691 HIVEP2P31629 2446 aa10.2□□□□□ -0.78
TRAF3-202ENST00000351691 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
TRAF3-202ENST00000351691 NREPQ16612 68 aa10.18□□□□□ -0.78
TRAF3-202ENST00000351691 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 SPATA3Q8NHX4 192 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 HIVEP1P15822 2718 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 SETD2Q9BYW2 2564 aaPredicted RBP10.17□□□□□ -0.78
TRAF3-202ENST00000351691 IGLV6-57P01721 117 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 TMEM254Q8TBM7 123 aa10.17□□□□□ -0.78
TRAF3-202ENST00000351691 Q8NDZ9 215 aa10.15□□□□□ -0.78
TRAF3-202ENST00000351691 WFDC10AQ9H1F0 79 aa10.15□□□□□ -0.78
TRAF3-202ENST00000351691 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
TRAF3-202ENST00000351691 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.78
TRAF3-202ENST00000351691 NSD1Q96L73 2696 aaPredicted RBP10.14□□□□□ -0.79
TRAF3-202ENST00000351691 Q6ZQY7 126 aa10.14□□□□□ -0.79
TRAF3-202ENST00000351691 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
TRAF3-202ENST00000351691 BPY2O14599 106 aa10.14□□□□□ -0.79
TRAF3-202ENST00000351691 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
TRAF3-202ENST00000351691 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
TRAF3-202ENST00000351691 SETXQ7Z333 2677 aaKnown RBP10.12□□□□□ -0.79
TRAF3-202ENST00000351691 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
TRAF3-202ENST00000351691 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
TRAF3-202ENST00000351691 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
TRAF3-202ENST00000351691 BRK1Q8WUW1 75 aa10.11□□□□□ -0.79
TRAF3-202ENST00000351691 INAFM1C9JVW0 142 aa10.1□□□□□ -0.79
TRAF3-202ENST00000351691 PRYO14603 147 aa10.1□□□□□ -0.79
TRAF3-202ENST00000351691 GYPEP15421 78 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
TRAF3-202ENST00000351691 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
TRAF3-202ENST00000351691 F8P00451 2351 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 IGHV4-30-4P0DP06 118 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 COX7BP24311 80 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 ESRGQ1W209 222 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 V9GYY9 64 aa10.09□□□□□ -0.79
TRAF3-202ENST00000351691 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
TRAF3-202ENST00000351691 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
TRAF3-202ENST00000351691 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAF3-202ENST00000351691 CLPSL2Q6UWE3 100 aa10.07□□□□□ -0.8
TRAF3-202ENST00000351691 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
TRAF3-202ENST00000351691 Q6ZTC4 211 aa10.06□□□□□ -0.8
TRAF3-202ENST00000351691 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
TRAF3-202ENST00000351691 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
TRAF3-202ENST00000351691 GVQW2A0A096LPI5 108 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-202ENST00000351691 KRTAP10-3P60369 221 aa10.05□□□□□ -0.8
TRAF3-202ENST00000351691 ELOF1P60002 83 aaKnown RBP10.04□□□□□ -0.8
TRAF3-202ENST00000351691 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 X6R8D5 127 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 C2CD3Q4AC94 2353 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 LYRM9A8MSI8 78 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 REG3AQ06141 175 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
TRAF3-202ENST00000351691 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
TRAF3-202ENST00000351691 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-202ENST00000351691 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
TRAF3-202ENST00000351691 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
TRAF3-202ENST00000351691 MPLKIPQ8TAP9 179 aa10.01□□□□□ -0.81
TRAF3-202ENST00000351691 SEC61GP60059 68 aa10.01□□□□□ -0.81
TRAF3-202ENST00000351691 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
TRAF3-202ENST00000351691 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
TRAF3-202ENST00000351691 NIPBLQ6KC79 2804 aaeCLIP9.99□□□□□ -0.81
TRAF3-202ENST00000351691 LCE6AA0A183 80 aa9.98□□□□□ -0.81
TRAF3-202ENST00000351691 PRR15Q8IV56 129 aa9.98□□□□□ -0.81
TRAF3-202ENST00000351691 IGLV10-54A0A075B6I4 117 aa9.97□□□□□ -0.81
TRAF3-202ENST00000351691 JMJD1CQ15652 2540 aa9.97□□□□□ -0.81
TRAF3-202ENST00000351691 A0A1B0GW54 56 aa9.96□□□□□ -0.82
TRAF3-202ENST00000351691 hDV103S1A0JD37 113 aa9.96□□□□□ -0.82
TRAF3-202ENST00000351691 APOC4P55056 127 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms