RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
RNF38-202ENST00000350199 KRTAP10-11P60412 298 aa13.25□□□□□ -0.29
RNF38-202ENST00000350199 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
RNF38-202ENST00000350199 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
RNF38-202ENST00000350199 IMUPQ9GZP8 106 aa13.25□□□□□ -0.29
RNF38-202ENST00000350199 LITAFQ99732 161 aa13.24□□□□□ -0.29
RNF38-202ENST00000350199 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
RNF38-202ENST00000350199 REG3GQ6UW15 175 aa13.24□□□□□ -0.29
RNF38-202ENST00000350199 LINC00575Q6W349 94 aa13.24□□□□□ -0.29
RNF38-202ENST00000350199 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
RNF38-202ENST00000350199 MP68P56378 58 aa13.23□□□□□ -0.29
RNF38-202ENST00000350199 CR1P17927 2039 aa13.22□□□□□ -0.29
RNF38-202ENST00000350199 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
RNF38-202ENST00000350199 SMCPP49901 116 aaPredicted RBP13.2□□□□□ -0.3
RNF38-202ENST00000350199 ATMQ13315 3056 aa13.2□□□□□ -0.3
RNF38-202ENST00000350199 LINC00612Q8N6U2 182 aa13.2□□□□□ -0.3
RNF38-202ENST00000350199 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
RNF38-202ENST00000350199 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
RNF38-202ENST00000350199 ADGRG4Q8IZF6 3080 aa13.18□□□□□ -0.3
RNF38-202ENST00000350199 PRO0461Q9UI25 63 aa13.18□□□□□ -0.3
RNF38-202ENST00000350199 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
RNF38-202ENST00000350199 NBEAQ8NFP9 2946 aa13.17□□□□□ -0.3
RNF38-202ENST00000350199 Q6JHZ5 121 aa13.17□□□□□ -0.3
RNF38-202ENST00000350199 UQCRQO14949 82 aa13.17□□□□□ -0.3
RNF38-202ENST00000350199 PRYO14603 147 aa13.16□□□□□ -0.3
RNF38-202ENST00000350199 MDFIQ99750 246 aa13.16□□□□□ -0.3
RNF38-202ENST00000350199 MAST4O15021 2626 aa13.16□□□□□ -0.3
RNF38-202ENST00000350199 ZNF706Q9Y5V0 76 aaPredicted RBP13.16□□□□□ -0.3
RNF38-202ENST00000350199 C20orf197Q8N268 126 aa13.15□□□□□ -0.3
RNF38-202ENST00000350199 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.31
RNF38-202ENST00000350199 C22orf24Q9Y442 160 aa13.14□□□□□ -0.31
RNF38-202ENST00000350199 FLNCQ14315 2725 aa13.13□□□□□ -0.31
RNF38-202ENST00000350199 C1orf137Q5JT78 98 aa13.13□□□□□ -0.31
RNF38-202ENST00000350199 IGLV5-52A0A0A0MRZ9 124 aa13.13□□□□□ -0.31
RNF38-202ENST00000350199 DMXL1Q9Y485 3027 aa13.12□□□□□ -0.31
RNF38-202ENST00000350199 IGLV9-49A0A0B4J1Y8 123 aa13.12□□□□□ -0.31
RNF38-202ENST00000350199 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
RNF38-202ENST00000350199 UNC79Q9P2D8 2635 aa13.12□□□□□ -0.31
RNF38-202ENST00000350199 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
RNF38-202ENST00000350199 K7EIL1 84 aa13.11□□□□□ -0.31
RNF38-202ENST00000350199 Q6Q795 121 aa13.11□□□□□ -0.31
RNF38-202ENST00000350199 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
RNF38-202ENST00000350199 EIF4EBP3O60516 100 aaPredicted RBP13.09□□□□□ -0.31
RNF38-202ENST00000350199 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
RNF38-202ENST00000350199 HRCT1Q6UXD1 115 aa13.08□□□□□ -0.32
RNF38-202ENST00000350199 DNAH10OSP0CZ25 163 aa13.08□□□□□ -0.32
RNF38-202ENST00000350199 USP34Q70CQ2 3546 aa13.07□□□□□ -0.32
RNF38-202ENST00000350199 CDIP1Q9H305 208 aa13.07□□□□□ -0.32
RNF38-202ENST00000350199 SERP2Q8N6R1 65 aa13.06□□□□□ -0.32
RNF38-202ENST00000350199 LINC00846Q9NV44 126 aa13.06□□□□□ -0.32
RNF38-202ENST00000350199 PRLHP81277 87 aa13.06□□□□□ -0.32
RNF38-202ENST00000350199 GVQW2A0A096LPI5 108 aaPredicted RBP13.05□□□□□ -0.32
RNF38-202ENST00000350199 LINC00167Q96N53 147 aa13.05□□□□□ -0.32
RNF38-202ENST00000350199 A0A087WVE0 104 aa13.05□□□□□ -0.32
RNF38-202ENST00000350199 PRR34Q9NV39 138 aa13.04□□□□□ -0.32
RNF38-202ENST00000350199 COL12A1Q99715 3063 aa13.04□□□□□ -0.32
RNF38-202ENST00000350199 TMEM258P61165 79 aa13.02□□□□□ -0.32
RNF38-202ENST00000350199 WFDC13Q8IUB5 93 aa13.02□□□□□ -0.33
RNF38-202ENST00000350199 CHD6Q8TD26 2715 aa13.02□□□□□ -0.33
RNF38-202ENST00000350199 Q9BRP9 147 aa13.01□□□□□ -0.33
RNF38-202ENST00000350199 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
RNF38-202ENST00000350199 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
RNF38-202ENST00000350199 CCDC179H3BU77 68 aa13□□□□□ -0.33
RNF38-202ENST00000350199 KIAA0087Q14695 138 aa13□□□□□ -0.33
RNF38-202ENST00000350199 TEX15Q9BXT5 2789 aa13□□□□□ -0.33
RNF38-202ENST00000350199 J3KT08 172 aa13□□□□□ -0.33
RNF38-202ENST00000350199 COX7CP15954 63 aa12.99□□□□□ -0.33
RNF38-202ENST00000350199 NBDYA0A0U1RRE5 68 aa12.99□□□□□ -0.33
RNF38-202ENST00000350199 ELOF1P60002 83 aaKnown RBP12.99□□□□□ -0.33
RNF38-202ENST00000350199 Q6ZRP5 223 aa12.99□□□□□ -0.33
RNF38-202ENST00000350199 LRBAP50851 2863 aa12.97□□□□□ -0.33
RNF38-202ENST00000350199 TRBV7-6A0A0J9YX20 115 aa12.97□□□□□ -0.33
RNF38-202ENST00000350199 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
RNF38-202ENST00000350199 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
RNF38-202ENST00000350199 Q6ZVQ6 151 aa12.97□□□□□ -0.33
RNF38-202ENST00000350199 VPREB1P12018 145 aa12.94□□□□□ -0.34
RNF38-202ENST00000350199 LOC400499M0QZD8 3231 aa12.94□□□□□ -0.34
RNF38-202ENST00000350199 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
RNF38-202ENST00000350199 SNURFQ9Y675 71 aa12.93□□□□□ -0.34
RNF38-202ENST00000350199 A0A087WSZ3 146 aa12.92□□□□□ -0.34
RNF38-202ENST00000350199 IGLV6-57P01721 117 aa12.92□□□□□ -0.34
RNF38-202ENST00000350199 KALRNO60229 2985 aa12.92□□□□□ -0.34
RNF38-202ENST00000350199 C15orf56Q8N910 161 aa12.91□□□□□ -0.34
RNF38-202ENST00000350199 FAM236DA0A1B0GTK5 79 aa12.9□□□□□ -0.34
RNF38-202ENST00000350199 FAM236CP0DP71 79 aa12.9□□□□□ -0.34
RNF38-202ENST00000350199 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
RNF38-202ENST00000350199 Q6ZRX8 168 aa12.89□□□□□ -0.35
RNF38-202ENST00000350199 LINC01547P58512 204 aaPredicted RBP12.89□□□□□ -0.35
RNF38-202ENST00000350199 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
RNF38-202ENST00000350199 TRBV7-7A0A0K0K1E9 115 aa12.88□□□□□ -0.35
RNF38-202ENST00000350199 FAM30AQ9NZY2 134 aa12.87□□□□□ -0.35
RNF38-202ENST00000350199 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
RNF38-202ENST00000350199 CIRBP-AS1Q8TBR5 109 aa12.87□□□□□ -0.35
RNF38-202ENST00000350199 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
RNF38-202ENST00000350199 FAM168BA1KXE4 195 aa12.86□□□□□ -0.35
RNF38-202ENST00000350199 WIPF1O43516 503 aa12.85□□□□□ -0.35
RNF38-202ENST00000350199 CHKB-CPT1BH3BT56 60 aa12.85□□□□□ -0.35
RNF38-202ENST00000350199 TRAV7A0A075B6U4 112 aa12.85□□□□□ -0.35
RNF38-202ENST00000350199 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
RNF38-202ENST00000350199 CHTF8P0CG12 524 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms