RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FRYLO94915 3013 aa8.46□□□□□ -1.05
SMAD9-201ENST00000350148 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
SMAD9-201ENST00000350148 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.06
SMAD9-201ENST00000350148 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
SMAD9-201ENST00000350148 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
SMAD9-201ENST00000350148 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 WFDC13Q8IUB5 93 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 Q8N3U1 123 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 WIPF1O43516 503 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 POLQO75417 2590 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 XAGE1AQ9HD64 81 aa8.45□□□□□ -1.06
SMAD9-201ENST00000350148 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
SMAD9-201ENST00000350148 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
SMAD9-201ENST00000350148 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
SMAD9-201ENST00000350148 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
SMAD9-201ENST00000350148 FRYQ5TBA9 3013 aa8.43□□□□□ -1.06
SMAD9-201ENST00000350148 REV3LO60673 3130 aa8.43□□□□□ -1.06
SMAD9-201ENST00000350148 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
SMAD9-201ENST00000350148 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-201ENST00000350148 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
SMAD9-201ENST00000350148 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
SMAD9-201ENST00000350148 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
SMAD9-201ENST00000350148 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
SMAD9-201ENST00000350148 NBEAQ8NFP9 2946 aa8.41□□□□□ -1.06
SMAD9-201ENST00000350148 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
SMAD9-201ENST00000350148 ZNF73O43830 326 aaPredicted RBP8.4□□□□□ -1.06
SMAD9-201ENST00000350148 FN1P02751 2386 aaKnown RBP8.4□□□□□ -1.07
SMAD9-201ENST00000350148 FASNP49327 2511 aaKnown RBP8.39□□□□□ -1.07
SMAD9-201ENST00000350148 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
SMAD9-201ENST00000350148 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
SMAD9-201ENST00000350148 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
SMAD9-201ENST00000350148 Q6ZQY7 126 aa8.38□□□□□ -1.07
SMAD9-201ENST00000350148 LINC00846Q9NV44 126 aa8.37□□□□□ -1.07
SMAD9-201ENST00000350148 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.36□□□□□ -1.07
SMAD9-201ENST00000350148 HCG22E2RYF7 251 aa8.36□□□□□ -1.07
SMAD9-201ENST00000350148 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
SMAD9-201ENST00000350148 MTORP42345 2549 aa8.36□□□□□ -1.07
SMAD9-201ENST00000350148 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
SMAD9-201ENST00000350148 CR1P17927 2039 aa8.36□□□□□ -1.07
SMAD9-201ENST00000350148 C2CD3Q4AC94 2353 aa8.35□□□□□ -1.07
SMAD9-201ENST00000350148 Q9UF83 564 aa8.35□□□□□ -1.07
SMAD9-201ENST00000350148 BCE1O60756 84 aa8.35□□□□□ -1.07
SMAD9-201ENST00000350148 TNRC18O15417 2968 aaPredicted RBP8.34□□□□□ -1.07
SMAD9-201ENST00000350148 HIGD2AQ9BW72 106 aa8.34□□□□□ -1.07
SMAD9-201ENST00000350148 ACANP16112 2415 aa8.34□□□□□ -1.07
SMAD9-201ENST00000350148 KRTAP10-11P60412 298 aa8.34□□□□□ -1.07
SMAD9-201ENST00000350148 KTN1-AS1Q86SY8 53 aa8.34□□□□□ -1.07
SMAD9-201ENST00000350148 H3BS24 57 aa8.33□□□□□ -1.08
SMAD9-201ENST00000350148 LY6G6CO95867 125 aa8.33□□□□□ -1.08
SMAD9-201ENST00000350148 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
SMAD9-201ENST00000350148 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
SMAD9-201ENST00000350148 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
SMAD9-201ENST00000350148 Q8N814 137 aa8.32□□□□□ -1.08
SMAD9-201ENST00000350148 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
SMAD9-201ENST00000350148 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
SMAD9-201ENST00000350148 MUC4Q99102 2169 aa8.31□□□□□ -1.08
SMAD9-201ENST00000350148 Q6ZRU5 148 aa8.31□□□□□ -1.08
SMAD9-201ENST00000350148 LCA10Q71F78 164 aa8.31□□□□□ -1.08
SMAD9-201ENST00000350148 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
SMAD9-201ENST00000350148 SPATA3Q8NHX4 192 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 M0R2N4 97 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
SMAD9-201ENST00000350148 LINC01547P58512 204 aaPredicted RBP8.3□□□□□ -1.08
SMAD9-201ENST00000350148 C1orf134Q5TEV5 83 aa8.29□□□□□ -1.08
SMAD9-201ENST00000350148 K7EIL1 84 aa8.29□□□□□ -1.08
SMAD9-201ENST00000350148 A0A087WYN8 130 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 REG3GQ6UW15 175 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 Q6ZVQ6 151 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 TM2D3Q9BRN9 247 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 USP24Q9UPU5 2620 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
SMAD9-201ENST00000350148 F8P00451 2351 aa8.27□□□□□ -1.09
SMAD9-201ENST00000350148 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
SMAD9-201ENST00000350148 LINC00337Q8N6G1 96 aa8.27□□□□□ -1.09
SMAD9-201ENST00000350148 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
SMAD9-201ENST00000350148 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
SMAD9-201ENST00000350148 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
SMAD9-201ENST00000350148 SMCR5Q8TEV8 140 aa8.26□□□□□ -1.09
SMAD9-201ENST00000350148 PCOTHQ58A44 107 aa8.26□□□□□ -1.09
SMAD9-201ENST00000350148 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
SMAD9-201ENST00000350148 WDFY4Q6ZS81 3184 aa8.26□□□□□ -1.09
SMAD9-201ENST00000350148 H0Y9P7 68 aa8.25□□□□□ -1.09
SMAD9-201ENST00000350148 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
SMAD9-201ENST00000350148 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
SMAD9-201ENST00000350148 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
SMAD9-201ENST00000350148 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
SMAD9-201ENST00000350148 LITAFQ99732 161 aa8.24□□□□□ -1.09
SMAD9-201ENST00000350148 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
SMAD9-201ENST00000350148 A0A096LNI7 61 aa8.23□□□□□ -1.09
SMAD9-201ENST00000350148 A8MUN3 132 aa8.22□□□□□ -1.09
SMAD9-201ENST00000350148 DCHS1Q96JQ0 3298 aa8.22□□□□□ -1.09
SMAD9-201ENST00000350148 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
SMAD9-201ENST00000350148 ASPMQ8IZT6 3477 aa8.22□□□□□ -1.09
SMAD9-201ENST00000350148 DSPP15924 2871 aaKnown RBP8.22□□□□□ -1.09
SMAD9-201ENST00000350148 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
SMAD9-201ENST00000350148 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms