RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
PTN-201ENST00000348225 M0R2N4 97 aa12.2□□□□□ -0.46
PTN-201ENST00000348225 SCGB1C2P0DMR2 95 aa12.2□□□□□ -0.46
PTN-201ENST00000348225 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
PTN-201ENST00000348225 SLPIP03973 132 aa12.19□□□□□ -0.46
PTN-201ENST00000348225 TLX1NBP0CAT3 122 aa12.19□□□□□ -0.46
PTN-201ENST00000348225 WFDC2Q14508 124 aa12.19□□□□□ -0.46
PTN-201ENST00000348225 LY6G6CO95867 125 aa12.19□□□□□ -0.46
PTN-201ENST00000348225 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
PTN-201ENST00000348225 COX6CP09669 75 aa12.18□□□□□ -0.46
PTN-201ENST00000348225 XAGE1AQ9HD64 81 aa12.18□□□□□ -0.46
PTN-201ENST00000348225 TRIAP1O43715 76 aa12.17□□□□□ -0.46
PTN-201ENST00000348225 Q6ZR54 194 aa12.17□□□□□ -0.46
PTN-201ENST00000348225 Q6ZRP5 223 aa12.17□□□□□ -0.46
PTN-201ENST00000348225 LINC00476Q8WZB0 136 aa12.17□□□□□ -0.46
PTN-201ENST00000348225 TRBV20-1A0A075B6N2 111 aa12.16□□□□□ -0.46
PTN-201ENST00000348225 GAGE2EQ4V326 116 aa12.16□□□□□ -0.46
PTN-201ENST00000348225 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
PTN-201ENST00000348225 GAGE2DQ9UEU5 116 aa12.16□□□□□ -0.46
PTN-201ENST00000348225 CNBPP62633 177 aaKnown RBP12.15□□□□□ -0.46
PTN-201ENST00000348225 RPL18AQ02543 176 aaKnown RBP12.15□□□□□ -0.46
PTN-201ENST00000348225 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
PTN-201ENST00000348225 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
PTN-201ENST00000348225 LRCOL1A6NCL2 159 aa12.14□□□□□ -0.47
PTN-201ENST00000348225 NCR3O14931 201 aa12.14□□□□□ -0.47
PTN-201ENST00000348225 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
PTN-201ENST00000348225 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
PTN-201ENST00000348225 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
PTN-201ENST00000348225 Q8NDZ9 215 aa12.13□□□□□ -0.47
PTN-201ENST00000348225 TMEM126AQ9H061 195 aa12.13□□□□□ -0.47
PTN-201ENST00000348225 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
PTN-201ENST00000348225 TCL1BO95988 128 aa12.11□□□□□ -0.47
PTN-201ENST00000348225 S100A7L2Q5SY68 101 aa12.11□□□□□ -0.47
PTN-201ENST00000348225 H3BMG7 143 aa12.1□□□□□ -0.47
PTN-201ENST00000348225 SMIM11BQ8TCY0 68 aa12.1□□□□□ -0.47
PTN-201ENST00000348225 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.09□□□□□ -0.47
PTN-201ENST00000348225 VPREB1P12018 145 aa12.09□□□□□ -0.47
PTN-201ENST00000348225 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
PTN-201ENST00000348225 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
PTN-201ENST00000348225 KMT2AQ03164 3969 aa12.09□□□□□ -0.47
PTN-201ENST00000348225 ATXN8Q156A1 80 aa12.08□□□□□ -0.48
PTN-201ENST00000348225 GAGE2BQ13066 116 aa12.08□□□□□ -0.48
PTN-201ENST00000348225 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
PTN-201ENST00000348225 Q8N814 137 aa12.07□□□□□ -0.48
PTN-201ENST00000348225 PLA2G2DQ9UNK4 145 aa12.06□□□□□ -0.48
PTN-201ENST00000348225 A0A087WTM6 91 aa12.05□□□□□ -0.48
PTN-201ENST00000348225 M0R378 163 aa12.05□□□□□ -0.48
PTN-201ENST00000348225 IGLV6-57P01721 117 aa12.05□□□□□ -0.48
PTN-201ENST00000348225 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
PTN-201ENST00000348225 CLEC2BQ92478 149 aa12.04□□□□□ -0.48
PTN-201ENST00000348225 H0YGX0 51 aa12.03□□□□□ -0.48
PTN-201ENST00000348225 LST1O00453 97 aa12.03□□□□□ -0.48
PTN-201ENST00000348225 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
PTN-201ENST00000348225 C16orf90A8MZG2 172 aa12.02□□□□□ -0.49
PTN-201ENST00000348225 F8W1H4 67 aa12.02□□□□□ -0.49
PTN-201ENST00000348225 C9orf163Q8N9P6 203 aa12.02□□□□□ -0.49
PTN-201ENST00000348225 DNAH2Q9P225 4427 aa12.02□□□□□ -0.49
PTN-201ENST00000348225 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
PTN-201ENST00000348225 KRTAP3-2Q9BYR7 98 aa12.01□□□□□ -0.49
PTN-201ENST00000348225 TRBV10-3A0A0K0K1G6 114 aa12□□□□□ -0.49
PTN-201ENST00000348225 SERTAD4-AS1Q5TG53 156 aa12□□□□□ -0.49
PTN-201ENST00000348225 IGLV5-37A0A075B6J1 123 aa12□□□□□ -0.49
PTN-201ENST00000348225 LINC01620Q4KN68 170 aa12□□□□□ -0.49
PTN-201ENST00000348225 TRAV23DV6A0A075B6W5 121 aa11.99□□□□□ -0.49
PTN-201ENST00000348225 A0A096LNI7 61 aa11.98□□□□□ -0.49
PTN-201ENST00000348225 PRO0461Q9UI25 63 aa11.98□□□□□ -0.49
PTN-201ENST00000348225 C9JAW5 83 aa11.97□□□□□ -0.49
PTN-201ENST00000348225 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
PTN-201ENST00000348225 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
PTN-201ENST00000348225 TRACP01848 142 aa11.97□□□□□ -0.49
PTN-201ENST00000348225 MTURNQ8N3F0 131 aa11.97□□□□□ -0.49
PTN-201ENST00000348225 FAM168BA1KXE4 195 aa11.96□□□□□ -0.5
PTN-201ENST00000348225 FAM19A5Q7Z5A7 132 aaPredicted RBP11.95□□□□□ -0.5
PTN-201ENST00000348225 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
PTN-201ENST00000348225 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
PTN-201ENST00000348225 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
PTN-201ENST00000348225 LINC00474Q9P2X8 69 aa11.94□□□□□ -0.5
PTN-201ENST00000348225 SLC25A20O43772 301 aa11.93□□□□□ -0.5
PTN-201ENST00000348225 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
PTN-201ENST00000348225 ZNF73O43830 326 aaPredicted RBP11.93□□□□□ -0.5
PTN-201ENST00000348225 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
PTN-201ENST00000348225 DNAH17Q9UFH2 4485 aa11.92□□□□□ -0.5
PTN-201ENST00000348225 DNAL4O96015 105 aa11.92□□□□□ -0.5
PTN-201ENST00000348225 A0A087WYN8 130 aa11.91□□□□□ -0.5
PTN-201ENST00000348225 A0A1B0GX51 115 aa11.91□□□□□ -0.5
PTN-201ENST00000348225 RTL8CO15255 209 aa11.91□□□□□ -0.5
PTN-201ENST00000348225 SNCGO76070 127 aa11.91□□□□□ -0.5
PTN-201ENST00000348225 MRPL55Q7Z7F7 128 aaKnown RBP11.91□□□□□ -0.5
PTN-201ENST00000348225 M0QXV9 152 aa11.9□□□□□ -0.5
PTN-201ENST00000348225 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
PTN-201ENST00000348225 KRTAP7-1Q8IUC3 87 aa11.9□□□□□ -0.5
PTN-201ENST00000348225 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
PTN-201ENST00000348225 TRBV7-6A0A0J9YX20 115 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 H3BT86 120 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 TNP2Q05952 138 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 HECTD4Q9Y4D8 3996 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 ANKRD29Q8N6D5 301 aa11.89□□□□□ -0.51
PTN-201ENST00000348225 LINC00167Q96N53 147 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms