RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PRYO14603 147 aa10.1□□□□□ -0.79
NUP50-201ENST00000347635 Q6ZRU5 148 aa10.1□□□□□ -0.79
NUP50-201ENST00000347635 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
NUP50-201ENST00000347635 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
NUP50-201ENST00000347635 ACANP16112 2415 aa10.09□□□□□ -0.79
NUP50-201ENST00000347635 BCE1O60756 84 aa10.09□□□□□ -0.79
NUP50-201ENST00000347635 SZT2Q5T011 3432 aa10.09□□□□□ -0.79
NUP50-201ENST00000347635 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
NUP50-201ENST00000347635 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
NUP50-201ENST00000347635 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
NUP50-201ENST00000347635 TMEM254Q8TBM7 123 aa10.08□□□□□ -0.8
NUP50-201ENST00000347635 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
NUP50-201ENST00000347635 PRUNE2Q8WUY3 3088 aa10.07□□□□□ -0.8
NUP50-201ENST00000347635 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
NUP50-201ENST00000347635 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
NUP50-201ENST00000347635 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
NUP50-201ENST00000347635 A0A096LNI7 61 aa10.05□□□□□ -0.8
NUP50-201ENST00000347635 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
NUP50-201ENST00000347635 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
NUP50-201ENST00000347635 F8P00451 2351 aa10.05□□□□□ -0.8
NUP50-201ENST00000347635 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
NUP50-201ENST00000347635 TRIOO75962 3097 aa10.04□□□□□ -0.8
NUP50-201ENST00000347635 ELOF1P60002 83 aaKnown RBP10.04□□□□□ -0.8
NUP50-201ENST00000347635 TRBV7-6A0A0J9YX20 115 aa10.04□□□□□ -0.8
NUP50-201ENST00000347635 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
NUP50-201ENST00000347635 VCANP13611 3396 aa10.03□□□□□ -0.8
NUP50-201ENST00000347635 Q8N9L7 120 aa10.02□□□□□ -0.8
NUP50-201ENST00000347635 LAMA1P25391 3075 aa10.02□□□□□ -0.8
NUP50-201ENST00000347635 PRR4Q16378 134 aa10.02□□□□□ -0.81
NUP50-201ENST00000347635 Q8NAQ8 132 aa10.02□□□□□ -0.81
NUP50-201ENST00000347635 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
NUP50-201ENST00000347635 REG3GQ6UW15 175 aa10.02□□□□□ -0.81
NUP50-201ENST00000347635 GIG44P09565 113 aaPredicted RBP10.02□□□□□ -0.81
NUP50-201ENST00000347635 V9GYY9 64 aa10.01□□□□□ -0.81
NUP50-201ENST00000347635 IGLV6-57P01721 117 aa9.99□□□□□ -0.81
NUP50-201ENST00000347635 ZNF292O60281 2723 aa9.99□□□□□ -0.81
NUP50-201ENST00000347635 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
NUP50-201ENST00000347635 C9orf129Q5T035 196 aaKnown RBP9.98□□□□□ -0.81
NUP50-201ENST00000347635 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
NUP50-201ENST00000347635 C4orf26Q17RF5 130 aa9.97□□□□□ -0.81
NUP50-201ENST00000347635 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
NUP50-201ENST00000347635 CHKB-CPT1BH3BT56 60 aa9.97□□□□□ -0.81
NUP50-201ENST00000347635 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
NUP50-201ENST00000347635 ESRGQ1W209 222 aa9.97□□□□□ -0.81
NUP50-201ENST00000347635 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
NUP50-201ENST00000347635 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
NUP50-201ENST00000347635 LRCOL1A6NCL2 159 aa9.95□□□□□ -0.82
NUP50-201ENST00000347635 HECTD1Q9ULT8 2610 aa9.94□□□□□ -0.82
NUP50-201ENST00000347635 KRTAP10-3P60369 221 aa9.93□□□□□ -0.82
NUP50-201ENST00000347635 SMIM29Q86T20 159 aa9.93□□□□□ -0.82
NUP50-201ENST00000347635 MDFIQ99750 246 aa9.93□□□□□ -0.82
NUP50-201ENST00000347635 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
NUP50-201ENST00000347635 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
NUP50-201ENST00000347635 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
NUP50-201ENST00000347635 HCG22E2RYF7 251 aa9.92□□□□□ -0.82
NUP50-201ENST00000347635 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
NUP50-201ENST00000347635 SPTSSBQ8NFR3 76 aa9.92□□□□□ -0.82
NUP50-201ENST00000347635 LINC00208Q96KT6 92 aa9.92□□□□□ -0.82
NUP50-201ENST00000347635 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
NUP50-201ENST00000347635 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
NUP50-201ENST00000347635 OBSCN-AS1Q96MR7 158 aa9.91□□□□□ -0.82
NUP50-201ENST00000347635 VPREB1P12018 145 aa9.9□□□□□ -0.83
NUP50-201ENST00000347635 A0A087WSZ3 146 aa9.89□□□□□ -0.83
NUP50-201ENST00000347635 A0A1B0GW54 56 aa9.89□□□□□ -0.83
NUP50-201ENST00000347635 Q9BRP9 147 aa9.89□□□□□ -0.83
NUP50-201ENST00000347635 PRO0628Q9UI54 55 aa9.88□□□□□ -0.83
NUP50-201ENST00000347635 SPTBN5Q9NRC6 3674 aaKnown RBP9.88□□□□□ -0.83
NUP50-201ENST00000347635 DEFB116Q30KQ4 102 aa9.88□□□□□ -0.83
NUP50-201ENST00000347635 VPS13AQ96RL7 3174 aa9.88□□□□□ -0.83
NUP50-201ENST00000347635 CASC2Q6XLA1 102 aa9.87□□□□□ -0.83
NUP50-201ENST00000347635 KRTAP10-11P60412 298 aa9.87□□□□□ -0.83
NUP50-201ENST00000347635 WWC2-AS2Q96NR7 200 aa9.87□□□□□ -0.83
NUP50-201ENST00000347635 K7EIL1 84 aa9.87□□□□□ -0.83
NUP50-201ENST00000347635 Q6ZRX8 168 aa9.86□□□□□ -0.83
NUP50-201ENST00000347635 IGLV9-49A0A0B4J1Y8 123 aa9.86□□□□□ -0.83
NUP50-201ENST00000347635 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
NUP50-201ENST00000347635 PRLHP81277 87 aa9.84□□□□□ -0.83
NUP50-201ENST00000347635 Q6ZRP5 223 aa9.84□□□□□ -0.83
NUP50-201ENST00000347635 HELZ2Q9BYK8 2649 aaKnown RBP9.84□□□□□ -0.83
NUP50-201ENST00000347635 CELSR3Q9NYQ7 3312 aa9.83□□□□□ -0.84
NUP50-201ENST00000347635 Q8NBF4 154 aa9.83□□□□□ -0.84
NUP50-201ENST00000347635 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 H0Y9P7 68 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 DNAH10OSP0CZ25 163 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 LINC00588Q9Y4M8 146 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
NUP50-201ENST00000347635 PSPHP1O15172 72 aa9.81□□□□□ -0.84
NUP50-201ENST00000347635 KLKP1Q107X0 134 aa9.81□□□□□ -0.84
NUP50-201ENST00000347635 A6NED7 52 aa9.81□□□□□ -0.84
NUP50-201ENST00000347635 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
NUP50-201ENST00000347635 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
NUP50-201ENST00000347635 REV3LO60673 3130 aa9.8□□□□□ -0.84
NUP50-201ENST00000347635 WDFY4Q6ZS81 3184 aa9.8□□□□□ -0.84
NUP50-201ENST00000347635 ST20-AS1Q8NBB2 130 aa9.79□□□□□ -0.84
NUP50-201ENST00000347635 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
NUP50-201ENST00000347635 PRR15LQ9BU68 103 aa9.79□□□□□ -0.84
NUP50-201ENST00000347635 H7BZZ5 65 aa9.77□□□□□ -0.85
NUP50-201ENST00000347635 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
NUP50-201ENST00000347635 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms