RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 RMI2Q96E14 147 aa10.43□□□□□ -0.74
RAB5C-201ENST00000346213 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
RAB5C-201ENST00000346213 HERV-K104P63124 156 aa10.42□□□□□ -0.74
RAB5C-201ENST00000346213 MIAQ16674 131 aa10.42□□□□□ -0.74
RAB5C-201ENST00000346213 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
RAB5C-201ENST00000346213 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
RAB5C-201ENST00000346213 Q5VSD8 79 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 XCL1P47992 114 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
RAB5C-201ENST00000346213 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
RAB5C-201ENST00000346213 SLPIP03973 132 aa10.39□□□□□ -0.75
RAB5C-201ENST00000346213 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-201ENST00000346213 PANO1I0J062 215 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 IFITM1P13164 125 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 A4D1N5 150 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 EPM2AB3EWF7 344 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 CFC1BP0CG36 223 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 CFC1P0CG37 223 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 TOMM7Q9P0U1 55 aa10.38□□□□□ -0.75
RAB5C-201ENST00000346213 HERC1Q15751 4861 aa10.37□□□□□ -0.75
RAB5C-201ENST00000346213 APOMO95445 188 aa10.37□□□□□ -0.75
RAB5C-201ENST00000346213 PRSS2P07478 247 aa10.37□□□□□ -0.75
RAB5C-201ENST00000346213 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
RAB5C-201ENST00000346213 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
RAB5C-201ENST00000346213 TSPAN13O95857 204 aa10.36□□□□□ -0.75
RAB5C-201ENST00000346213 SFTA2Q6UW10 78 aa10.36□□□□□ -0.75
RAB5C-201ENST00000346213 COX7A2LO14548 114 aa10.35□□□□□ -0.75
RAB5C-201ENST00000346213 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
RAB5C-201ENST00000346213 Q8IZM0 81 aa10.35□□□□□ -0.75
RAB5C-201ENST00000346213 C15orf56Q8N910 161 aa10.35□□□□□ -0.75
RAB5C-201ENST00000346213 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
RAB5C-201ENST00000346213 FOXI1Q12951 378 aa10.34□□□□□ -0.75
RAB5C-201ENST00000346213 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
RAB5C-201ENST00000346213 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
RAB5C-201ENST00000346213 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
RAB5C-201ENST00000346213 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
RAB5C-201ENST00000346213 PPDPFQ9H3Y8 114 aa10.33□□□□□ -0.76
RAB5C-201ENST00000346213 PRO1854Q9UHT4 67 aa10.33□□□□□ -0.76
RAB5C-201ENST00000346213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
RAB5C-201ENST00000346213 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
RAB5C-201ENST00000346213 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
RAB5C-201ENST00000346213 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
RAB5C-201ENST00000346213 DAND5Q8N907 189 aa10.31□□□□□ -0.76
RAB5C-201ENST00000346213 MALP21145 153 aa10.31□□□□□ -0.76
RAB5C-201ENST00000346213 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
RAB5C-201ENST00000346213 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
RAB5C-201ENST00000346213 H3BMG7 143 aa10.3□□□□□ -0.76
RAB5C-201ENST00000346213 NPC2P61916 151 aa10.3□□□□□ -0.76
RAB5C-201ENST00000346213 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
RAB5C-201ENST00000346213 CXCL5P42830 114 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 LYRM7Q5U5X0 104 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-201ENST00000346213 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
RAB5C-201ENST00000346213 INAFM2P0DMQ5 153 aa10.28□□□□□ -0.76
RAB5C-201ENST00000346213 HIGD2BQ4VC39 106 aa10.28□□□□□ -0.76
RAB5C-201ENST00000346213 C14orf177Q52M58 125 aa10.28□□□□□ -0.76
RAB5C-201ENST00000346213 PRO0461Q9UI25 63 aa10.28□□□□□ -0.76
RAB5C-201ENST00000346213 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
RAB5C-201ENST00000346213 CNBPP62633 177 aaKnown RBP10.28□□□□□ -0.76
RAB5C-201ENST00000346213 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
RAB5C-201ENST00000346213 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
RAB5C-201ENST00000346213 LINC00158P58513 81 aa10.26□□□□□ -0.77
RAB5C-201ENST00000346213 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
RAB5C-201ENST00000346213 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
RAB5C-201ENST00000346213 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
RAB5C-201ENST00000346213 C2orf82Q6UX34 121 aa10.25□□□□□ -0.77
RAB5C-201ENST00000346213 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
RAB5C-201ENST00000346213 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
RAB5C-201ENST00000346213 PPDPFLQ8WWR9 84 aa10.23□□□□□ -0.77
RAB5C-201ENST00000346213 GVQW2A0A096LPI5 108 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-201ENST00000346213 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 PFN2P35080 140 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 COX17Q14061 63 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 LOC107984156A0A0G2JMH3 177 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 M0QXV9 152 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 ARL17AQ8IVW1 177 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
RAB5C-201ENST00000346213 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
RAB5C-201ENST00000346213 H7C2G1 150 aa10.19□□□□□ -0.78
RAB5C-201ENST00000346213 PSMB2P49721 201 aa10.19□□□□□ -0.78
RAB5C-201ENST00000346213 Q1RN00 199 aa10.19□□□□□ -0.78
RAB5C-201ENST00000346213 TRBV20-1A0A075B6N2 111 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
RAB5C-201ENST00000346213 ANAPC13Q9BS18 74 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 SCGB1C2P0DMR2 95 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 SPACA4Q8TDM5 124 aa10.18□□□□□ -0.78
RAB5C-201ENST00000346213 Q6Q795 121 aa10.17□□□□□ -0.78
RAB5C-201ENST00000346213 TEN1Q86WV5 123 aa10.17□□□□□ -0.78
RAB5C-201ENST00000346213 C10orf25Q5T742 122 aa10.16□□□□□ -0.78
RAB5C-201ENST00000346213 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
RAB5C-201ENST00000346213 TRIAP1O43715 76 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms